BAC Information

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BAC

Clone NameB6Ng01-092B15
Chromosome7 (Build37)
Map Location 149,498,853 - 149,636,041
singlet/doubletdoublet
Overlap gene6330512M04Rik, Ctsd, Syt8, Tnni2
Upstream geneDeaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015
Downstream geneLsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B15.bB6Ng01-092B15.g
ACCDH903954DH903955
length1,13369
definitionDH903954|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B15, 5' end.DH903955|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,634,898 - 149,636,041)(149,498,853 - 149,498,922)
sequence
gaattctctctgtattttttctggctgattttaatctgtttatgctagat
tcccatccagtaaaactcctgggaaaaatatatcctcatatgccaaggaa
atcaatcaacttctaatggttgtataagttaggttggattttggctccct
tgtggattaaacttccaatgtttcctttaaacactcccttttgcccttca
catttacaatctgtctgttgcatttatcagtctgaataggaggcaaacat
gaaagcactcagggcgatttcctctttttaaagatggctttctatcactc
gggtggcctgggttagaaaaggtacagtataatttactacacactgtctt
ggaataagtatccataatttagagaatacagtacacagaaatcattcaca
ataactcagcacgagacaacatcaagatattctctgcactttgcctgttt
ctgtcaaatcaaccagacagtggaatcataagcacagggttccagggcct
gatggggcaaaaacaagttgtcaggaagcatggatcagaggagacctgag
cagcttagagacgaatagtcttggagattctgggcaccaaaagcagacat
taagacccagcatagcctgcgtctccagccttgtgcccaagcagataggt
tctttcttgcctccagctcttgtagctgcccactggcacagcctgtctag
cacctggccatgtattcttttagttcccttgtgagtgtcctagttagggt
taccatagctatgatgaaacacgtgaccataaacaagtttgtgaggaaag
ctgttgatttggcttacacttccacattgtcgtttcatcacagaaggaag
tcagggcaggaactcaagcagagcaggaatctgaaggtaggagctgatgc
acaggccgtaggggagtgctgcttacgggcttgcttctcctggcttgctc
agcctgctttcttatagaacccaagacctccaaatcagagtgctaccacc
cacatggtctgagccctcacttatcatcactaattagaaatgcctacagc
tggatcttatagaggcatttttcaattggaggttcctcctccaatgaata
tagcttgggcaagttgaacataagctagtcaac
aaggagttcagaggggcctaactgaaggcagactcagagagttgatgggg
aggggaggggaggactgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149634898_149636041
seq2: B6Ng01-092B15.b_45_1177 (reverse)

seq1  GTTGACTAGCTTTATG-TCAACTTGACACAAGCTATATTCATCTGGGAGG  49
      |||||||||| ||||| |||||||| | |||||||||||||  | |||||
seq2  GTTGACTAGC-TTATGTTCAACTTG-CCCAAGCTATATTCA--TTGGAGG  46

seq1  AGGGAACCT-CAATTGAAAAAAATGCCTCTATAAGATCCAGCTGTAGGGC  98
      | ||||||| ||||||  |||||||||||||||||||||||||||| |||
seq2  A-GGAACCTCCAATTG--AAAAATGCCTCTATAAGATCCAGCTGTA-GGC  92

seq1  ATTTTCTTAATTAGTGATTGATAGGTGAGGGCTCAGACCATTGTGGGTGG  148
      ||||   |||||||||| ||||| |||||||||||||||| |||||||||
seq2  ATTT--CTAATTAGTGA-TGATAAGTGAGGGCTCAGACCA-TGTGGGTGG  138

seq1  TAGCACCTCTGATTTGGAGGTCTTGGGTTCTATAAGAAAGCAGGCTGAGC  198
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCA-CTCTGATTTGGAGGTCTTGGGTTCTATAAGAAAGCAGGCTGAGC  187

seq1  AAGCCAGGAGAAGCAAGCCCGTAAGCAGCACTCCCCTACGGCCTGTGCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGAGAAGCAAGCCCGTAAGCAGCACTCCCCTACGGCCTGTGCAT  237

seq1  CAGCTCCTACCTTCAGATTCCTGCTCTGCTTGAGTTCCTGCCCTGACTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTACCTTCAGATTCCTGCTCTGCTTGAGTTCCTGCCCTGACTTC  287

seq1  CTTCTGTGATGAAACGACAATGTGGAAGTGTAAGCCAAATCAACAGCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGATGAAACGACAATGTGGAAGTGTAAGCCAAATCAACAGCTTT  337

seq1  CCTCACAAACTTGTTTATGGTCACGTGTTTCATCATAGCTATGGTAACCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAAACTTGTTTATGGTCACGTGTTTCATCATAGCTATGGTAACCC  387

seq1  TAACTAGGACACTCACAAGGGAACTAAAAGAATACATGGCCAGGTGCTAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGGACACTCACAAGGGAACTAAAAGAATACATGGCCAGGTGCTAG  437

seq1  ACAGGCTGTGCCAGTGGGCAGCTACAAGAGCTGGAGGCAAGAAAGAACCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGTGCCAGTGGGCAGCTACAAGAGCTGGAGGCAAGAAAGAACCT  487

seq1  ATCTGCTTGGGCACAAGGCTGGAGACGCAGGCTATGCTGGGTCTTAATGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTGGGCACAAGGCTGGAGACGCAGGCTATGCTGGGTCTTAATGT  537

seq1  CTGCTTTTGGTGCCCAGAATCTCCAAGACTATTCGTCTCTAAGCTGCTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGGTGCCCAGAATCTCCAAGACTATTCGTCTCTAAGCTGCTCA  587

seq1  GGTCTCCTCTGATCCATGCTTCCTGACAACTTGTTTTTGCCCCATCAGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCTCTGATCCATGCTTCCTGACAACTTGTTTTTGCCCCATCAGGC  637

seq1  CCTGGAACCCTGTGCTTATGATTCCACTGTCTGGTTGATTTGACAGAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACCCTGTGCTTATGATTCCACTGTCTGGTTGATTTGACAGAAAC  687

seq1  AGGCAAAGTGCAGAGAATATCTTGATGTTGTCTCGTGCTGAGTTATTGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGTGCAGAGAATATCTTGATGTTGTCTCGTGCTGAGTTATTGTG  737

seq1  AATGATTTCTGTGTACTGTATTCTCTAAATTATGGATACTTATTCCAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTCTGTGTACTGTATTCTCTAAATTATGGATACTTATTCCAAGA  787

seq1  CAGTGTGTAGTAAATTATACTGTACCTTTTCTAACCCAGGCCACCCGAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTAGTAAATTATACTGTACCTTTTCTAACCCAGGCCACCCGAGT  837

seq1  GATAGAAAGCCATCTTTAAAAAGAGGAAATCGCCCTGAGTGCTTTCATGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAAGCCATCTTTAAAAAGAGGAAATCGCCCTGAGTGCTTTCATGT  887

seq1  TTGCCTCCTATTCAGACTGATAAATGCAACAGACAGATTGTAAATGTGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCCTATTCAGACTGATAAATGCAACAGACAGATTGTAAATGTGAA  937

seq1  GGGCAAAAGGGAGTGTTTAAAGGAAACATTGGAAGTTTAATCCACAAGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAAGGGAGTGTTTAAAGGAAACATTGGAAGTTTAATCCACAAGGG  987

seq1  AGCCAAAATCCAACCTAACTTATACAACCATTAGAAGTTGATTGATTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAATCCAACCTAACTTATACAACCATTAGAAGTTGATTGATTTCC  1037

seq1  TTGGCATATGAGGATATATTTTTCCCAGGAGTTTTACTGGATGGGAATCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATATGAGGATATATTTTTCCCAGGAGTTTTACTGGATGGGAATCT  1087

seq1  AGCATAAACAGATTAAAATCAGCCAGAAAAAATACAGAGAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAACAGATTAAAATCAGCCAGAAAAAATACAGAGAGAATTC  1133

seq1: chr7_149498853_149498922
seq2: B6Ng01-092B15.g_74_142

seq1  AAGGAGTTCAGAGGGGCCTAACTGAAGGCAGACTCAGAGAGTTGATGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTTCAGAGGGGCCTAACTGAAGGCAGACTCAGAGAGTTGATGGGG  50

seq1  AGGGGAGGGGAGGACATGGA  70
      ||||||||||||||| ||||
seq2  AGGGGAGGGGAGGAC-TGGA  69