BAC Information

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BAC

Clone NameB6Ng01-092E07
Chromosome7 (Build37)
Map Location 106,165,895 - 106,234,568
singlet/doubletdoublet
Overlap geneUvrag
Upstream geneGdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, EG666529
Downstream geneDgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092E07.bB6Ng01-092E07.g
ACCDH904076DH904077
length8821,107
definitionDH904076|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E07, 5' end.DH904077|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,165,895 - 106,166,775)(106,233,440 - 106,234,568)
sequence
gaattccagcacccacaaagtagctcacagctgtctgtaatgctggttcc
cagggacccaataccgtcttctggtctccatggacaccaggcatacaaat
ggcacacacacacacacacacacacacacacacacacagagagagagaga
gagagagagagagagagagagagagagagagagaggcagaacaattgttt
aactagtttaccagaggcaggaatgtctgttcacctagagatagcagtag
gaaaagtgggaggaaacccctaaccacaacaactgtgttggggagccaca
ccaagcaaagggcagactcttcatcaaatggtgtgggaaagctagctcac
ctcataaaggagaatgcaatagcttcctctcactctgcacaaagttaatt
caacatagatgaaagactttaagttgtaaaactctgaaaatgctagagaa
aaaaccaaaagaagtaaaagccacttcaagatataagcataggcaacttc
cagatccaggcacaggccaagacttcctgcaaggactccagcagcccagc
cgtgcatagcaggggccatgggtatttcttaatagaaaaaagtttttaaa
aatcaccaataaatatacaaagaaggagaggtggatgaggaggaagagga
ggaagcagaggaagaaagaagaggaagaggagaaggaagatccttaccaa
cctcacccctcatctcatctgtcagcaccaaggaaacaaaggatatcaaa
agcttacaaggatgcccagctgctagggatatacatctgtgccaccacca
tgcaaagctacattgggcagggaccaagaaggtaaggaaccaagataggt
agacaggaaaaggagaatatacttgaacaaag
gaattcctgaacctggagagaaatgaactataaacatggggcgatgacaa
agcctctgaagtcatgtgagacacaggctggcaacatgctgttcagtaga
gaaggactgagtagcccaggctggagaagaagcaggcagtggtgtgacca
agaagcagtagagcacgtgctgctgggtctggggcccagcgtctctgctt
tcttctctcccatctcggtaaactgtgggcttggctggtcctgttgcttt
gttttttaaggagatgcagtggtcaagtaaaccaagaacagaaaaattgc
gttgtgtactttagcaagtggatttatgctaggtggtgtctttagaacat
ccaactccggaagtcttccctttgtgtcccagcttcatcttctgagttcc
tggagtccttgaacatcttccagatctcctctgccagatgcactgctctg
tccagtggcctgcccttcttccctctgtaggctttgtggggtcagactga
catgagcaatgctgaccttccctcacccaccctccccaaactccctgcca
caatgcttgggacatggtatttacttagtaaaaacatttgggattaagtc
agagacttgtgaggctgccattgctgggctgtttgccattgccaaggctg
gctgtcctggtgtgggagggagggtgactcactctgcagccggtccctga
ctctacatctggtagagtcttgcagtcagaggcaatggtagcattcagag
ccaatgtctgcccgccattgtagttaaaaccccaagaaccccacggctag
agactcacagttggtgaccgttggtgtaagcaccagtacccggcttttct
gtctacttgtgacaagtagaaagttttgaacaagttttgaacaagttcag
acaagatgggtgacaggaaatggagtcagaaggtgcttgagaactgataa
actgactggcaaacattgtttaacttttgactaaagctcgcatgattaaa
agctttgtgtgcatttcctcttgactgattcttcttcctcagatacgagc
aatggaatgaaggcgtcattatgacaaagctagtcctccagcagcagtgt
tgttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106165895_106166775
seq2: B6Ng01-092E07.b_46_927

seq1  GAATTCCAGCACCCACAAAGTAGCTCACAGCTGTCTGTAATGCTGGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACCCACAAAGTAGCTCACAGCTGTCTGTAATGCTGGTTCC  50

seq1  CAGGGACCCAATACCGTCTTCTGGTCTCCATGGACACCAGGCATACAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCCAATACCGTCTTCTGGTCTCCATGGACACCAGGCATACAAAT  100

seq1  GGCACACACACACACACACACACACACACACACACACAGAGAGAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACACACACACACACACACACACACACACACACAGAGAGAGAGAGA  150

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGAACAATTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGAACAATTGTTT  200

seq1  AACTAGTTTACCAGAGGCAGGAATGTCTGTTCACCTAGAGATAGCAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTTTACCAGAGGCAGGAATGTCTGTTCACCTAGAGATAGCAGTAG  250

seq1  GAAAAGTGGGAGGAAACCCCTAACCACAACAACTGTGTTGGGGAGCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGGGAGGAAACCCCTAACCACAACAACTGTGTTGGGGAGCCACA  300

seq1  CCAAGCAAAGGGCAGACTCTTCATCAAATGGTGTGGGAAAGCTAGCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAAAGGGCAGACTCTTCATCAAATGGTGTGGGAAAGCTAGCTCAC  350

seq1  CTCATAAAGGAGAATGCAATAGCTTCCTCTCACTCTGCACAAAGTTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAAGGAGAATGCAATAGCTTCCTCTCACTCTGCACAAAGTTAATT  400

seq1  CAACATAGATGAAAGACTTTAAGTTGTAAAACTCTGAAAATGCTAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAGATGAAAGACTTTAAGTTGTAAAACTCTGAAAATGCTAGAGAA  450

seq1  AAAACCAAAAGAAGTAAAAGCCACTTCAAGATATAAGCATAGGCAACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAAGAAGTAAAAGCCACTTCAAGATATAAGCATAGGCAACTTC  500

seq1  CAGATCCAGGCACAGGCCAAGACTTCCTGCAAGGACTCCAGCAGCCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCAGGCACAGGCCAAGACTTCCTGCAAGGACTCCAGCAGCCCAGC  550

seq1  CGTGCATAGCAGGGGCCATGGGTATTTCTTAATAGAAAAAAGTTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCATAGCAGGGGCCATGGGTATTTCTTAATAGAAAAAAGTTTTTAAA  600

seq1  AATCACCAATAAATATACAAAGAAGGAGAGGTGGATGAGGAGGAAGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCAATAAATATACAAAGAAGGAGAGGTGGATGAGGAGGAAGAGGA  650

seq1  GGAAGCAGAGGAAG-AAGAAGAGGAAGAGGAGAAGGAAGATCCTTACCAA  699
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGAGGAAGAAAGAAGAGGAAGAGGAGAAGGAAGATCCTTACCAA  700

seq1  CCTCACCCC-CATCTCATCTGTCAGCACCAAGGAAACAAAGGATATCAAA  748
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCCTCATCTCATCTGTCAGCACCAAGGAAACAAAGGATATCAAA  750

seq1  AGCTTACAAGGATGCCCAGCTGCTAGGGATATACATCTGTGCCGCCACCA  798
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCTTACAAGGATGCCCAGCTGCTAGGGATATACATCTGTGCCACCACCA  800

seq1  TGCAAAGCTACATTGGGCAAGGAACCAAG-AGGTAAGGAACCAAGAGAGG  847
      |||||||||||||||||| ||| |||||| |||||||||||||||| |||
seq2  TGCAAAGCTACATTGGGC-AGGGACCAAGAAGGTAAGGAACCAAGATAGG  849

seq1  TAGACAGGAAAGGTAGAAGATACCTTGAACAAAG  881
      ||||||||||| | |||| ||| |||||||||||
seq2  TAGACAGGAAAAGGAGAATATA-CTTGAACAAAG  882

seq1: chr7_106233440_106234568
seq2: B6Ng01-092E07.g_66_1172 (reverse)

seq1  AACACACAACACTGCTTGGCTTGGAGGACTAGGCTTTGTCTATAATGGGA  50
      |||| |||||||||||  || |||||||||| |||||||| |||||  ||
seq2  AACA-ACAACACTGCT--GC-TGGAGGACTA-GCTTTGTC-ATAAT--GA  42

seq1  CGACTTCATTTCCATTTGCTCTGTTATTTTGGAGGGAAGAGGATCAGGTC  100
      || ||||| ||||| ||||||   ||| |  |||| |  || |||| |||
seq2  CGCCTTCA-TTCCA-TTGCTC--GTATCT--GAGGAAGAAGAATCA-GTC  85

seq1  AAGAGGAAATGCACACAAGCCTTTTTAGTCATGGCGAGCTTTTAGTC-AA  149
      ||||||||||||||||||  | ||||| |||| |||||| ||||||| ||
seq2  AAGAGGAAATGCACACAAAGC-TTTTAATCAT-GCGAGC-TTTAGTCAAA  132

seq1  AGTTAAACAATGTTTGCCAGTCAGTTTTATCTGTTCTCAAGCCACCTTCT  199
      |||||||||||||||||||||||| |||||| ||||||||| ||||||||
seq2  AGTTAAACAATGTTTGCCAGTCAG-TTTATCAGTTCTCAAG-CACCTTCT  180

seq1  GAACTCCATTTTCCTGTCACCCATCTTGTCTGAACTTGTTCAAAACTTGT  249
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  G-ACTCCA-TTTCCTGTCACCCATCTTGTCTGAACTTGTTCAAAACTTGT  228

seq1  TCAAAACTTTCTACTTGTTCACAAGTAGACAGAGAAGCCGGGTACTGGTG  299
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  TCAAAACTTTCTACTTG-TCACAAGTAGACAGAAAAGCCGGGTACTGGTG  277

seq1  CTTACACCAACGGTCACCAACTGTGAGTCTCTAGCCGTGGGGTTCTTGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACCAACGGTCACCAACTGTGAGTCTCTAGCCGTGGGGTTCTTGGG  327

seq1  GTTTTAACTACAATGGCGGGCAGACATTGGCTCTGAATGCTACCATTGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAACTACAATGGCGGGCAGACATTGGCTCTGAATGCTACCATTGCC  377

seq1  TCTGACTGCAAGACTCTACCAGATGTAGAGTCAGGGACCGGCTGCAGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGCAAGACTCTACCAGATGTAGAGTCAGGGACCGGCTGCAGAGT  427

seq1  GAGTCACCCTCCCTCCCACACCAGGACAGCCAGCCTTGGCAATGGCAAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACCCTCCCTCCCACACCAGGACAGCCAGCCTTGGCAATGGCAAAC  477

seq1  AGCCCAGCAATGGCAGCCTCACAAGTCTCTGACTTAATCCCAAATGTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCAATGGCAGCCTCACAAGTCTCTGACTTAATCCCAAATGTTTT  527

seq1  TACTAAGTAAATACCATGTCCCAAGCATTGTGGCAGGGAGTTTGGGGAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTAAATACCATGTCCCAAGCATTGTGGCAGGGAGTTTGGGGAGG  577

seq1  GTGGGTGAGGGAAGGTCAGCATTGCTCATGTCAGTCTGACCCCACAAAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGAGGGAAGGTCAGCATTGCTCATGTCAGTCTGACCCCACAAAGC  627

seq1  CTACAGAGGGAAGAAGGGCAGGCCACTGGACAGAGCAGTGCATCTGGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGGGAAGAAGGGCAGGCCACTGGACAGAGCAGTGCATCTGGCAG  677

seq1  AGGAGATCTGGAAGATGTTCAAGGACTCCAGGAACTCAGAAGATGAAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCTGGAAGATGTTCAAGGACTCCAGGAACTCAGAAGATGAAGCT  727

seq1  GGGACACAAAGGGAAGACTTCCGGAGTTGGATGTTCTAAAGACACCACCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAAAGGGAAGACTTCCGGAGTTGGATGTTCTAAAGACACCACCT  777

seq1  AGCATAAATCCACTTGCTAAAGTACACAACGCAATTTTTCTGTTCTTGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAATCCACTTGCTAAAGTACACAACGCAATTTTTCTGTTCTTGGT  827

seq1  TTACTTGACCACTGCATCTCCTTAAAAAACAAAGCAACAGGACCAGCCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGACCACTGCATCTCCTTAAAAAACAAAGCAACAGGACCAGCCAA  877

seq1  GCCCACAGTTTACCGAGATGGGAGAGAAGAAAGCAGAGACGCTGGGCCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACAGTTTACCGAGATGGGAGAGAAGAAAGCAGAGACGCTGGGCCCC  927

seq1  AGACCCAGCAGCACGTGCTCTACTGCTTCTTGGTCACACCACTGCCTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGCAGCACGTGCTCTACTGCTTCTTGGTCACACCACTGCCTGCT  977

seq1  TCTTCTCCAGCCTGGGCTACTCAGTCCTTCTCTACTGAACAGCATGTTGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCAGCCTGGGCTACTCAGTCCTTCTCTACTGAACAGCATGTTGC  1027

seq1  CAGCCTGTGTCTCACATGACTTCAGAGGCTTTGTCATCGCCCCATGTTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTGTCTCACATGACTTCAGAGGCTTTGTCATCGCCCCATGTTTA  1077

seq1  TAGTTCATTTCTCTCCAGGTTCAGGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  TAGTTCATTTCTCTCCAGGTTCAGGAATTC  1107