BAC Information

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BAC

Clone NameB6Ng01-092M13
Chromosome7 (Build37)
Map Location 27,459,490 - 27,569,498
singlet/doubletdoublet
Overlap geneEG243881, LOC623830, Cyp2b19
Upstream geneA830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12
Downstream geneCyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092M13.bB6Ng01-092M13.g
ACCDH904447DH904448
length236423
definitionDH904447|Mus musculus domesticus DNA, BAC clone: B6Ng01-092M13, 5' end.DH904448|Mus musculus domesticus DNA, BAC clone: B6Ng01-092M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,459,490 - 27,459,731)(27,569,071 - 27,569,498)
sequence
tgtgtgatggttggacttctcctggttgcagattggagagagaagaatgg
gtcaggggtgactagacctttgcaaggaaatacacacacttctctgggca
ctatcctgtttgtgagtttcatactaaatagaactctgaacattactcgg
acctagacaatgtcccttggactcttctgtcttctctctctctctctctc
tctctctctctctctctctctctctctctctctctc
tctctgcagaccgtggaggtgttgagcactaatccccctccctcattctt
cttagtatctgggatcacatgcatgtactatgagcctgactaagggaggt
tttataaggctagtttagtggagtgacaagaacatagaaggctgtgcaaa
gggaggagggacacaatgtttctttatggcctttcactccccaggttcct
tcatcatctatctccactgctctccaggttcatgtcctctatgtaacttc
tctccataagcagtgagtcagaaggggatgaagaacatctatcagtaagt
aaaaagatatcaggagaaagggcatctaaggacacaggcagcaagaagtc
tgagagaaagaaagggggtgtgagctcaaatgctcaaagacattaggggg
tggaagggaagggaagggaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27459490_27459731
seq2: B6Ng01-092M13.b_44_285

seq1  GAATTCTGTGTGATGGTTGGACTTCTCCTGGTTGCAGATTGGAGAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTGATGGTTGGACTTCTCCTGGTTGCAGATTGGAGAGAGAA  50

seq1  GAATGGGTCAGGGGTGACTAGACCTTTGCAAGGAAATACACACACTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTCAGGGGTGACTAGACCTTTGCAAGGAAATACACACACTTCTC  100

seq1  TGGGCACTATCCTGTTTGTGAGTTTCATACTAAATAGAACTCTGAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACTATCCTGTTTGTGAGTTTCATACTAAATAGAACTCTGAACATT  150

seq1  ACTCGGACCTAGACAATGTCCCTTGGACTCTTCTGTCTTCTCTCTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGACCTAGACAATGTCCCTTGGACTCTTCTGTCTTCTCTCTCTCTC  200

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  242
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  242

seq1: chr7_27569071_27569498
seq2: B6Ng01-092M13.g_70_497 (reverse)

seq1  CCTTCCCTTCCCTTCCCTTCCACCCCCTAATGTCTTTGAGCATTTGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTTCCCTTCCCTTCCACCCCCTAATGTCTTTGAGCATTTGAGCT  50

seq1  CACACCCCCTTTCTTTCTCTCAGACTTCTTGCTGCCTGTGTCCTTAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCCCTTTCTTTCTCTCAGACTTCTTGCTGCCTGTGTCCTTAGATG  100

seq1  CCCTTTCTCCTGATATCTTTTTACTTACTGATAGATGTTCTTCATCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTCCTGATATCTTTTTACTTACTGATAGATGTTCTTCATCCCCT  150

seq1  TCTGACTCACTGCTTATGGAGAGAAGTTACATAGAGGACATGAACCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCACTGCTTATGGAGAGAAGTTACATAGAGGACATGAACCTGGA  200

seq1  GAGCAGTGGAGATAGATGATGAAGGAACCTGGGGAGTGAAAGGCCATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGGAGATAGATGATGAAGGAACCTGGGGAGTGAAAGGCCATAAA  250

seq1  GAAACATTGTGTCCCTCCTCCCTTTGCACAGCCTTCTATGTTCTTGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTGTGTCCCTCCTCCCTTTGCACAGCCTTCTATGTTCTTGTCAC  300

seq1  TCCACTAAACTAGCCTTATAAAACCTCCCTTAGTCAGGCTCATAGTACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAAACTAGCCTTATAAAACCTCCCTTAGTCAGGCTCATAGTACAT  350

seq1  GCATGTGATCCCAGATACTAAGAAGAATGAGGGAGGGGGATTAGTGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGATCCCAGATACTAAGAAGAATGAGGGAGGGGGATTAGTGCTCA  400

seq1  ACACCTCCACGGTCTGCAGAGAGAATTC  428
      ||||||||||||||||||||||||||||
seq2  ACACCTCCACGGTCTGCAGAGAGAATTC  428