BAC Information

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BAC

Clone NameB6Ng01-093J12
Chromosome11 (Build37)7 (Build37)
Map Location 63,128,767 - 63,128,81419,150,944 - 19,151,717
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTtc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
Downstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093J12.bB6Ng01-093J12.g
ACCDH905038DH905039
length790774
definitionDH905038|Mus musculus domesticus DNA, BAC clone: B6Ng01-093J12, 5' end.DH905039|Mus musculus domesticus DNA, BAC clone: B6Ng01-093J12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(63,128,767 - 63,128,814)(19,150,944 - 19,151,717)
sequence
gaattctcattcctgaacatctatgctccaaatgcaagggcacccacaat
cattaaagaaactttactaaagctcaaagcccacattacaccccacacaa
taatagtgggagacttcaacaccccactattgtcagtggacagatcatgg
aaacaaaaagtaaacagagacacaataaaacttacagaagggatggacca
actggttttaacagatatctacagaacatttcttagcacctcatggtatc
ttccccaaaattgaccatatcacaaaataggtctcaactgatacaagtag
actgaaataattccatgcatcctatcagatcaccatggactaagcctggt
cttcaacaacaataaaaacaatggaagcccacaaatatatggaagctgaa
caacactctactcaatgattacttggtcaaggtagatgtaaattaagtct
ttttagaatgtaatgaaaatgaaggtgcaatatacccaaacttatgggac
acaatgaaagcagtgctaagaggaaaattcataggtctgggtgcctccaa
aaagaaagtggagagggcatacactagcagcttaacagcacacctgaaag
ctctagaacaaaaacaagcaaacacagtccagaggagtagaaggcagtaa
ataatcaaactcagggatgaaatgaaccaagtacaaaaaaaaaaaaaact
atacaaagaatcaacaaaaccaggagctggttctttaagaaaatctcctc
tctctctctctctctctctctctctctctctctctctctc
gaattcattactctgctctcacagggtagatggagatacaggctccttca
ggctctgctctgcactccacacagctgtgtgtcatgcacccacaatgtgc
acactgagacacaagccttcagaaacccacacatacaatacataattatt
aaatcacactttaacgtaatgattgtcatttgctccaaacctaggaactg
cgtagatgaatccatgcagatatcctccctttctcctttacttctttcct
ttttcctttcttttcttctttctttctttctttctttctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tcctttcttccttccttccttccttccttccttccttccttccttccttc
tttctttcctacttccttccttctttccttcctttctcccctccttcttt
ccttccttctacctgccttctttccttccttctttctttccttcctttgt
tcgttcgttcattcattcattcgttcgttccttccttcctgtttcctttg
ttttttcccttctttttcactcccattattttctgagttcttttcagcta
ctgagcattccaaaaagataattttaatggctgtcttcacaaagcctttt
ctagtgaaccagaaatcagagtattcagaggagagagtcaatggtttaat
agagctgcaaatagaatagaaaacaattcagaaaatgaggattatgtgca
ggggtggaggaggaggaggaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63128767_63128814
seq2: B6Ng01-093J12.b_788_835 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAT  48
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAT  48

seq1: chr7_19150944_19151717
seq2: B6Ng01-093J12.g_72_845 (reverse)

seq1  CTCCTCCTCCTCCTCCTCCACCCCTGCACATAATCCTCATTTTCTGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCCTCCTCCTCCACCCCTGCACATAATCCTCATTTTCTGAATT  50

seq1  GTTTTCTATTCTATTTGCAGCTCTATTAAACCATTGACTCTCTCCTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTATTCTATTTGCAGCTCTATTAAACCATTGACTCTCTCCTCTGA  100

seq1  ATACTCTGATTTCTGGTTCACTAGAAAAGGCTTTGTGAAGACAGCCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGATTTCTGGTTCACTAGAAAAGGCTTTGTGAAGACAGCCATTA  150

seq1  AAATTATCTTTTTGGAATGCTCAGTAGCTGAAAAGAACTCAGAAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCTTTTTGGAATGCTCAGTAGCTGAAAAGAACTCAGAAAATAAT  200

seq1  GGGAGTGAAAAAGAAGGGAAAAAACAAAGGAAACAGGAAGGAAGGAACGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGAAAAAGAAGGGAAAAAACAAAGGAAACAGGAAGGAAGGAACGA  250

seq1  ACGAATGAATGAATGAACGAACGAACAAAGGAAGGAAAGAAAGAAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATGAATGAATGAACGAACGAACAAAGGAAGGAAAGAAAGAAGGAAG  300

seq1  GAAAGAAGGCAGGTAGAAGGAAGGAAAGAAGGAGGGGAGAAAGGAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGCAGGTAGAAGGAAGGAAAGAAGGAGGGGAGAAAGGAAGGAA  350

seq1  AGAAGGAAGGAAGTAGGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGGAAGTAGGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGA  400

seq1  AGGAAGGAAGGAAGGAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAA  450

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  500

seq1  AAGAAAGAAGAAAAGAAAGGAAAAAGGAAAGAAGTAAAGGAGAAAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAGAAAAGAAAGGAAAAAGGAAAGAAGTAAAGGAGAAAGGGAG  550

seq1  GATATCTGCATGGATTCATCTACGCAGTTCCTAGGTTTGGAGCAAATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTGCATGGATTCATCTACGCAGTTCCTAGGTTTGGAGCAAATGAC  600

seq1  AATCATTACGTTAAAGTGTGATTTAATAATTATGTATTGTATGTGTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTACGTTAAAGTGTGATTTAATAATTATGTATTGTATGTGTGGGT  650

seq1  TTCTGAAGGCTTGTGTCTCAGTGTGCACATTGTGGGTGCATGACACACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGGCTTGTGTCTCAGTGTGCACATTGTGGGTGCATGACACACAG  700

seq1  CTGTGTGGAGTGCAGAGCAGAGCCTGAAGGAGCCTGTATCTCCATCTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGAGTGCAGAGCAGAGCCTGAAGGAGCCTGTATCTCCATCTACC  750

seq1  CTGTGAGAGCAGAGTAATGAATTC  774
      ||||||||||||||||||||||||
seq2  CTGTGAGAGCAGAGTAATGAATTC  774