BAC Information

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BAC

Clone NameB6Ng01-093O07
Chromosome7 (Build37)
Map Location 19,343,735 - 19,344,872
singlet/doubletsinglet
Overlap geneLOC666863
Upstream genePsg30, Ppia-ps7_184.1, Ceacam14, EG381852, Ceacam11, Ceacam13, LOC384560, Ceacam12, Igfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831, EG574429, EG232930, Psg25, EG545925, Psg23, Psg21, EG434540, BC050099
Downstream geneSycp1-ps1, Psg19, Psg17, Mill2, Pglyrp1, C530028I08Rik, Nova2, Nanos2, P42pop, Irf2bp1, Foxa3, Sympk, Rshl1, Dmwd, Dmpk, Six5, EG243866, Fbxo46, Qpctl, Snrpd2, Gipr, Eml2, Gpr4, Opa3, Vasp, C79127, Rtn2, Fosb, D830036C21Rik, Ercc1, Cd3eap, Ppp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093O07.bB6Ng01-093O07.g
ACCDH905255DH905256
length1,130861
definitionDH905255|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O07, 5' end.DH905256|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctataaccctcaggggcagggaattgttgaaagggcccatcag
accttaaagaataccctgactaagctcggggcccaagagactatctacac
ccttaagggacaaaacagctactgtctcatgcactttttgtgcttaactt
tttaactctagacataagtggtcactcagcagctgaccgactttggcatc
ctaaaaccagtctagaatatgctcaagcactatggaaagatccccttaca
gggatttggaatgggacagaccccatcattatctgggcataaggctcagc
ctgcatctataattccaaggaagggggagccagatggctccctaaaagac
taattaagccatttaataccacccagggtggcacctgagaagatatttca
tgttttctctcatagaatcaccatggatagatctttcaccatattgatga
tgctggtcatgacggcgacagccaggcaagcccagacctatcaggttttt
aattttacttggatcatccaaaatcaggcggggaatgccatctttgcttg
cttgacagttggctccgcccccacatttgatcccataattatagatctat
gccacctagccctgggagctgcctcatattagggggtccccgacctcttc
tggccactagaaaaggcacctgaacggtctggagtggcaattaatggtgc
aggggcttgtgcaaatgccgcccagtgtgcggccctcagagatcaactct
tttccaaaaaaaatggtcgttaaaaaactagattagttaaagatagcatt
gccaaggttactgccagtttagaaaaaaagaaagagagagaacaacaaga
gtcatggtatcaaaattggtttcaatctccccctggctttgttcgacctt
gttgccctcccttttggggccctattgggactcctactattgattttctt
cggtccttgggcattcagaaattgacccaatctgttaaatctaaattgat
tcatctctttcagccgcatctgtttcagttcttaccatcagcgggacgtt
ggcgatacagcaagttactggagaagagtcagactggattaccgcttcat
ctcctcgctctcgggagaaggaactcattt
gaattcctgatttgattcaaatacttttagaaagaaagtgttagaaatgg
ttttagttgttttgccagaaagatgtaataaaatcagaatcaaaactaga
atgtgcccccttctcatagaacagtaagtaaaggctgcataatttggaat
gcagtgagctctcacaattacactaaggagagaaataggcttcagacaga
tttgtgatgaaggaaaaacattcactctagggcaggtccacggatgaggc
cacaggtgcactgtgattaaagcaaggccgtgtaaagctgttgctttgaa
cttataatgagcttatagatgaagcagtgctttgaacttaatatcagcat
ccttctgtaactcctcctctgtgtaacattttatttaggagataagtttc
taagaacttttgtctataaaaaggtcagagagaaaaataaagtgtggctt
gggagacgctgccacatccatccatccttccttccaaatgtatgtgtgtg
gcatttggagctcagcctcttccaccaaatgtatatatgtatatatctgt
tgtctatatgtatgtgtgtaggtatatgtgaatgtgtgtaagcatgcata
aatacttatggagttgattgagacaggtggacgggtctgacctgtgtgtg
tgtgtgtttgtctgtgtaaaggattttattcttttttctctttctctctg
gttcacaaaggaattaatgagtcccaaaacctcttgcctagccagcaaga
ggcctttgagccagataggagagaaaccagtgctattaaagtacacacat
aggtattaagggcggggaccatctgttttacctcttccatgttaatcctg
cctagtacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_19343735_19344872
seq2: B6Ng01-093O07.b_46_1175

seq1  GAATTCCCTATAACCCTCAGGGGCAGGGAATTGTTGAAAGGGCCCATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATAACCCTCAGGGGCAGGGAATTGTTGAAAGGGCCCATCAG  50

seq1  ACCTTAAAGAATACCCTGACTAAGCTCGGGGCCCAAGAGACTATCTACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAAAGAATACCCTGACTAAGCTCGGGGCCCAAGAGACTATCTACAC  100

seq1  CCTTAAGGGACAAAACAGCTACTGTCTCATGCACTTTTTGTGCTTAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGGGACAAAACAGCTACTGTCTCATGCACTTTTTGTGCTTAACTT  150

seq1  TTTAACTCTAGACATAAGTGGTCACTCAGCAGCTGACCGACTTTGGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTCTAGACATAAGTGGTCACTCAGCAGCTGACCGACTTTGGCATC  200

seq1  CTAAAACCAGTCTAGAATATGCTCAAGCACTATGGAAAGATCCCCTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCAGTCTAGAATATGCTCAAGCACTATGGAAAGATCCCCTTACA  250

seq1  GGGATTTGGAATGGGACAGACCCCATCATTATCTGGGCATAAGGCTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTGGAATGGGACAGACCCCATCATTATCTGGGCATAAGGCTCAGC  300

seq1  CTGCATCTATAATTCCAAGGAAGGGGGAGCCAGATGGCTCCCTAAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCTATAATTCCAAGGAAGGGGGAGCCAGATGGCTCCCTAAAAGAC  350

seq1  TAATTAAGCCATTTAATACCACCCAGGGTGGCACCTGAGAAGATATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGCCATTTAATACCACCCAGGGTGGCACCTGAGAAGATATTTCA  400

seq1  TGTTTTCTCTCATAGAATCACCATGGATAGATCTTTCACCATATTGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTCTCATAGAATCACCATGGATAGATCTTTCACCATATTGATGA  450

seq1  TGCTGGTCATGACGGCGACAGCCAGGCAAGCCCAGACCTATCAGGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCATGACGGCGACAGCCAGGCAAGCCCAGACCTATCAGGTTTTT  500

seq1  AATTTTACTTGGATCATCCAAAATCAGGCGGGGAATGCCATCTTTGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACTTGGATCATCCAAAATCAGGCGGGGAATGCCATCTTTGCTTG  550

seq1  CTTGACAGTTGGCTCCGCCCCCACATTTGATCCCATAATTATAGATCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAGTTGGCTCCGCCCCCACATTTGATCCCATAATTATAGATCTAT  600

seq1  GCCACCTAGCCCTGGGAGCTGCCTCATATTAGGGGGTCCCCGACCTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTAGCCCTGGGAGCTGCCTCATATTAGGGGGTCCCCGACCTCTTC  650

seq1  TGGCCACTAGAAAAGGCACCTGAACGGTCTGGAGTGGCAATTAATGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACTAGAAAAGGCACCTGAACGGTCTGGAGTGGCAATTAATGGTGC  700

seq1  AGGGGCTTGTGCAAATGCCGCCCAGTGTGCGGCCCTCAGAGATCAACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTTGTGCAAATGCCGCCCAGTGTGCGGCCCTCAGAGATCAACTCT  750

seq1  TTTCCAAAAAAAATGGTCGTTAAAAAACTAGATTAGTTAAAGATAGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAAAAATGGTCGTTAAAAAACTAGATTAGTTAAAGATAGCATT  800

seq1  GCCAAGGTTACTGCCAGTTTAGAAAAAAAGAAAGAGAGAGAACAACAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGTTACTGCCAGTTTAGAAAAAAAGAAAGAGAGAGAACAACAAGA  850

seq1  GTCATGGTATCAAAATTGGTTTTCAATCTCCCCCTGGCTTTCGTTCGACC  900
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  GTCATGGTATCAAAATTGG-TTTCAATCTCCCCCTGGCTTT-GTTCGACC  898

seq1  TTGTTGCCCTCCCTTTTGGGGCCCCTATTGGGACTCCTACTATTGATTTC  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  TTGTTGCCCTCCCTTTTGGGG-CCCTATTGGGACTCCTACTATTGATTTT  947

seq1  CTTCGGTCCTTGGGCATTTCAGAAATTGACCCAATCTGTTAAATCTCAAA  1000
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  CTTCGGTCCTTGGGCA-TTCAGAAATTGACCCAATCTGTTAAATCT-AAA  995

seq1  TTGATTCATCTCTTTCAAGCGCATCTGTTTCAGTTCATTACCATCAGCTG  1050
      |||||||||||||||||  ||||||||||||||||| ||||||||||| |
seq2  TTGATTCATCTCTTTCAGCCGCATCTGTTTCAGTTC-TTACCATCAGCGG  1044

seq1  GACGTTGGCGATAACAAGCAGGTTACTGGAGAAGAGTCAGACGTGGA-TA  1099
      |||||||||||||   |||| ||||||||||||||||||||| |||| ||
seq2  GACGTTGGCGATA--CAGCAAGTTACTGGAGAAGAGTCAGAC-TGGATTA  1091

seq1  CCGCTTCATCACCCTCG-TCTCGGGGAGAGAGACTCATTT  1138
      ||||||||||  ||||| |||||||   ||  ||||||||
seq2  CCGCTTCATC-TCCTCGCTCTCGGGAGAAGGAACTCATTT  1130