BAC Information

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BAC

Clone NameB6Ng01-093O19
Chromosome7 (Build37)
Map Location 9,729,544 - 9,875,498
singlet/doubletdoublet
Overlap geneEG434113, EG665577, LOC665571, LOC100042083, Gm1961
Upstream geneLOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582
Downstream geneV2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093O19.bB6Ng01-093O19.g
ACCDH905279DH905280
length9751,063
definitionDH905279|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O19, 5' end.DH905280|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,729,544 - 9,730,081)(9,874,434 - 9,875,498)
sequence
gaattcttcacgaatttattttttttacttttttaattattttttaatac
tttttattaggtattttcctcatttacatttccaatgctatcccaaaagt
cccccataccctccctcccactcccctacccacccactcccactttttga
ccctggagttcccctgtactggggcatataatgtttgcaagtccagtggg
ccgctctttccagtgatggccgaatatgccatctattgatacatatgcag
ctagagtcaagaactccggggcactggttagttcataatgttgttctacc
tataaggatgcagatccatttagctccttgggtactttctctagctcctc
catttggggccctgtgatccatccaatagctgactgtgagaacccacttc
tgtttttgctaggccctggcatagtctcacaagagacagctatatctggg
tcctttcagcaaaatcttgctagtatatgacatagtgtcagcgtttggaa
attgattatgggatggaaccctggatatggcaggctctagatgttccatc
cttttgacacagatccaaactttgtctctgtatctccttccttggtgttt
ttttcccaattctaaggaggggcaaagtgtccacactttggtctttgtct
ttcttgagtttcatgcatttagcaaattgtatcttatatcttgggtattc
taagtttctgggctaatatccacttagagtgagtacatattgtgtgagtt
cctttgtgtttgggttacctcactcaggacggtaccctccaggtccatcc
atctgcctagaaatttcataaattcattctttttaatagctgagtagtac
tccattgtgtaaatttaccacattttctgtatccatttcctctgttgagg
gcatctgggttctttccacttctggctattataaataaggctgctatgaa
catagtggaccatgtgtccttctta
gaattctcattgacatataacttgattttgtccaaggaattccgtttgga
gtttgacattaatagtttataggatcatcttattatgtttatcacatgta
aatatggaataaataactggcattaataattccatatgttctgattatag
aatttacaatttaaagtatagtgttcttagtactaaacctggaataaata
tcactgaattgtctatcactaactcatgctttactcactactattcatat
gaggtatgaggtcggatttcctggtcttttcacctagcatcgtttcaaac
aactacttaccataatgtatatgcaaattttgtcctattatgatggctta
gattttgtttaatcttgttttattttagtattctcctatagaatcctgtt
attttctaatgagtgacagaaagtggatctgatggaaaaggcagttggga
agtaaataggaatattaactaagatatatttgccagcaaagctgacagtt
ggtcacattccaatagaagggagtgaaactgtaattaggatatattatgt
gaggataacaattttttttcaaaaaataaaacaatcacaatttcaaaaaa
attctctctgttctcagagaatgatctttctgttgtgtgttgtgttcttt
tgttacgtgttttttgtcaagtattattccatacatatgtatcaaattct
tgaattacctttttcccccttattaaacattataatgtttttctccagtt
ttttaagaaagaaaagttcttctcttgtatatgaatgtgccttcctaccc
tctgcaggcaacttaggaatgccttaaaaataaatcagcctcgttgacct
tgattcatttagagaacattaacaaaaattgttcagttatacagaaaata
atttgttgctttttcttagtttgctgtttttctgtattttgagggtgggt
atagtcatttgtttgtttgtgctctaaggcgttctatggctccctgacct
tccggtcatcctacctaaaagagaggaagggatttcttccatattattaa
aaaatgctgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9729544_9730081
seq2: B6Ng01-093O19.b_45_582

seq1  GAATTCTTCACGAATTTATTTTTTTTACTTTTTTAATTATTTTTTAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACGAATTTATTTTTTTTACTTTTTTAATTATTTTTTAATAC  50

seq1  TTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGT  100

seq1  CCCCCATACCCTCCCTCCCACTCCCCTACCCACCCACTCCCACTTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATACCCTCCCTCCCACTCCCCTACCCACCCACTCCCACTTTTTGA  150

seq1  CCCTGGAGTTCCCCTGTACTGGGGCATATAATGTTTGCAAGTCCAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGTTCCCCTGTACTGGGGCATATAATGTTTGCAAGTCCAGTGGG  200

seq1  CCGCTCTTTCCAGTGATGGCCGAATATGCCATCTATTGATACATATGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCTTTCCAGTGATGGCCGAATATGCCATCTATTGATACATATGCAG  250

seq1  CTAGAGTCAAGAACTCCGGGGCACTGGTTAGTTCATAATGTTGTTCTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTCAAGAACTCCGGGGCACTGGTTAGTTCATAATGTTGTTCTACC  300

seq1  TATAAGGATGCAGATCCATTTAGCTCCTTGGGTACTTTCTCTAGCTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGATGCAGATCCATTTAGCTCCTTGGGTACTTTCTCTAGCTCCTC  350

seq1  CATTTGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGAACCCACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGAACCCACTTC  400

seq1  TGTTTTTGCTAGGCCCTGGCATAGTCTCACAAGAGACAGCTATATCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGCTAGGCCCTGGCATAGTCTCACAAGAGACAGCTATATCTGGG  450

seq1  TCCTTTCAGCAAAATCTTGCTAGTATATGACATAGTGTCAGCGTTTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAGCAAAATCTTGCTAGTATATGACATAGTGTCAGCGTTTGGAA  500

seq1  ATTGATTATGGGATGGAACCCTGGATATGGCAGGCTCT  538
      ||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATGGGATGGAACCCTGGATATGGCAGGCTCT  538

seq1: chr7_9874434_9875498
seq2: B6Ng01-093O19.g_67_1129 (reverse)

seq1  AGAACAGCACTTTTTAATAATATGGAAG-AATCCCTT-CACACTTTTAAG  48
      ||||||||| |||||||||||||||||| |||||||| | | |||||| |
seq2  AGAACAGCATTTTTTAATAATATGGAAGAAATCCCTTCCTCTCTTTTAGG  50

seq1  TAAGATGAACAGAAGGTCAAAGGAGCCTATAGACAGCACTAGAGCAACAA  98
      || ||||| | ||||||| | |||||| |||||  ||  |||||| ||||
seq2  TAGGATGACCGGAAGGTC-AGGGAGCC-ATAGAACGCCTTAGAGC-ACAA  97

seq1  ACAAACAAATGACTATTAACACACCTC-AAATACAGAAAAAACAGC-AAC  146
      ||||||||||||||||   ||| |||| |||||||| ||||||||| |||
seq2  ACAAACAAATGACTATACCCAC-CCTCAAAATACAG-AAAAACAGCAAAC  145

seq1  TAAGCAAAAGCAACAAATAATTTTCTGTTATAACTGAACAA-TTTTGTTA  195
      |||| ||||||||||||| |||||||| ||||||||||||| ||||||||
seq2  TAAGAAAAAGCAACAAATTATTTTCTG-TATAACTGAACAATTTTTGTTA  194

seq1  ATGTTCTCTAAATGAAATCAAGGTCAACGAGGCTGATTTATTTTTTAAGG  245
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  ATGTTCTCTAAATG-AATCAAGGTCAACGAGGCTGATTTA-TTTTTAAGG  242

seq1  CATTCCTAAGTTGCCTGCAGAGGGTAGGAAGGCACATTCATATACAAGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTAAGTTGCCTGCAGAGGGTAGGAAGGCACATTCATATACAAGAG  292

seq1  AAGAACTTTTCTTTCTTAAAAAACTGGAGAAAAACATTATAATGTTTAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTTTCTTTCTTAAAAAACTGGAGAAAAACATTATAATGTTTAAT  342

seq1  AAGGGGGAAAAAGGTAATTCAAGAATTTGATACATATGTATGGAATAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGAAAAAGGTAATTCAAGAATTTGATACATATGTATGGAATAATA  392

seq1  CTTGAC-AAAAACACGTAACAAAAGAACACAACACACAACAGAAAGATCA  444
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAAAAAACACGTAACAAAAGAACACAACACACAACAGAAAGATCA  442

seq1  TTCTCTGAGAACAGAGAGAATTTTTTTGAAATTGTGATTGTTTTATTTTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAGAACAGAGAGAATTTTTTTGAAATTGTGATTGTTTTATTTTT  492

seq1  TGAAAAAAAATTGTTATCCTCACATAATATATCCTAATTACAGTTTCACT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAAATTGTTATCCTCACATAATATATCCTAATTACAGTTTCACT  542

seq1  CCCTTCTATTGGAATGTGACCAACTGTCAGCTTTGCTGGCAAATATATCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTATTGGAATGTGACCAACTGTCAGCTTTGCTGGCAAATATATCT  592

seq1  TAGTTAATATTCCTATTTACTTCCCAACTGCCTTTTCCATCAGATCCACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAATATTCCTATTTACTTCCCAACTGCCTTTTCCATCAGATCCACT  642

seq1  TTCTGTCACTCATTAGAAAATAACAGGATTCTATAGGAGAATACTAAAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCACTCATTAGAAAATAACAGGATTCTATAGGAGAATACTAAAAT  692

seq1  AAAACAAGATTAAACAAAATCTAAGCCATCATAATAGGACAAAATTTGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGATTAAACAAAATCTAAGCCATCATAATAGGACAAAATTTGCA  742

seq1  TATACATTATGGTAAGTAGTTGTTTGAAACGATGCTAGGTGAAAAGACCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTATGGTAAGTAGTTGTTTGAAACGATGCTAGGTGAAAAGACCA  792

seq1  GGAAATCCGACCTCATACCTCATATGAATAGTAGTGAGTAAAGCATGAGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCCGACCTCATACCTCATATGAATAGTAGTGAGTAAAGCATGAGT  842

seq1  TAGTGATAGACAATTCAGTGATATTTATTCCAGGTTTAGTACTAAGAACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATAGACAATTCAGTGATATTTATTCCAGGTTTAGTACTAAGAACA  892

seq1  CTATACTTTAAATTGTAAATTCTATAATCAGAACATATGGAATTATTAAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTTAAATTGTAAATTCTATAATCAGAACATATGGAATTATTAAT  942

seq1  GCCAGTTATTTATTCCATATTTACATGTGATAAACATAATAAGATGATCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTATTTATTCCATATTTACATGTGATAAACATAATAAGATGATCC  992

seq1  TATAAACTATTAATGTCAAACTCCAAACGGAATTCCTTGGACAAAATCAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTATTAATGTCAAACTCCAAACGGAATTCCTTGGACAAAATCAA  1042

seq1  GTTATATGTCAATGAGAATTC  1065
      |||||||||||||||||||||
seq2  GTTATATGTCAATGAGAATTC  1063