BAC Information

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BAC

Clone NameB6Ng01-093P22
Chromosome7 (Build37)
Map Location 58,646,136 - 58,647,220
singlet/doubletsinglet
Overlap genenone
Upstream geneNell1, 4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
Downstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P22.bB6Ng01-093P22.g
ACCDH905330DH905331
length1,084772
definitionDH905330|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P22, 5' end.DH905331|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggcaatgccacttggaagtatcacagtgggagctgatagacat
catgtttcttgtgctttgtttctatccactcttgacttgttaataaaatg
agttctcaactcaaggtcactggaccatctaggagacagagtatgcccag
agaatccacagtatcattaatcatctttatcttcaaacagtctcaacgag
ataaaaactaccattcaaactgtaataattgtaattcagagagagagaga
gagagagagagagcagacagcatagattatcttgctgaagacttatatta
ctaagtctataataatacatgctttctaagattttatttgcaagggaacc
cttttgtcaagttaggacaaagcattgccttctgttttatctccaaatgt
tttctttctagggcagagagagacctgtaaatacaaggacttgaatttat
tcatctatgttctataatctcagaacacagcacgatgccagatagagtca
gtaattcacaaggaaagaggcatgtctggataattaaatgatatacagct
tatcctctgctttatcaagagtgagatgatatttagatctagttcaaaat
aaatatgcattagcccagcttgccaaacctcccatgcatatcatggctca
ttctgagcaccatttacctcacaaacagaaagtgcttttcctgatctcca
gaaagctaattaataaatgctctagtgtcaatcttgataaagctactgat
gtacactaaaaacaaatttgagaatgtagagctatgattaaggcaattaa
atacatgttccgttgtcattcatatcttgattataaactactgtggtata
gactgaaattaacatgtacacatattttgcatcatttgccaaagactagt
ttaagtaataatcataatttaggatcacttccatataagcactaaaattg
ccctctgtgttcaagagttgtagtcacaggatattagatgtaaataaatg
agaacttgtattctgcttaaggctaaaaattgccattacctaaatgcaat
tacaccagcatgggctttctcttactggatttca

gaattccttcaatttatgttttttttttttattggttgtattaccatttt
cagttcttgaacagtttccttcacccgtatgttttcttggctttcttagc
attctttgcaagatttattgattttctccattttttttgtttgcctttta
gtcaatttccctaagggattcattttcatttctttctaaaagacctctgt
catcttcatgtagttggtttaaggtcatttttcttctgtttcagatgaat
tcgaatattcaagtcttgctgtcataggacagctgggctcttgtggtgcc
atatactgttctggctattatgttcttacactgggctttagatatctgga
ttttggatgactatagggccttgtcatgaattctgggtttcttttgttgt
atgggtgttttgtttcttgttttttttttttttttttttgtttttgtttt
tgtttttttttgtttttttttttttttttgttttctctttggtcttctga
tccttgtggactggatattggggttcagtgtgccttctgatctaataagg
agtctcttaccaggttggggactggatttcttcagggctgaatttgtggg
atagcaattgtttaaattagactctgttatgaaaaatcttgttttcccca
tccatggaaatggaaaagttttgctgggaaaataatctagaatgaacaaa
tatggtccctcaaaatctgcacggtaattttaacaagccctctttggctt
tttaaattggcctttagtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58646136_58647220
seq2: B6Ng01-093P22.b_48_1131

seq1  GAATTCAGGCAATGCCACTTGGAAGTATCACAGTGGGAGCTGATAGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAATGCCACTTGGAAGTATCACAGTGGGAGCTGATAGACAT  50

seq1  CATGTTTCTTGTGCTTTGTTTCTATCCACTCTTGACTTGTTAATAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCTTGTGCTTTGTTTCTATCCACTCTTGACTTGTTAATAAAATG  100

seq1  AGTTCTCAACTCAAGGTCACTGGACCATCTAGGAGACAGAGTATGCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAACTCAAGGTCACTGGACCATCTAGGAGACAGAGTATGCCCAG  150

seq1  AGAATCCACAGTATCATTAATCATCTTTATCTTCAAACAGTCTCAACGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCACAGTATCATTAATCATCTTTATCTTCAAACAGTCTCAACGAG  200

seq1  ATAAAAACTACCATTCAAACTGTAATAATTGTAATTCAGAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTACCATTCAAACTGTAATAATTGTAATTCAGAGAGAGAGAGA  250

seq1  GAGAGAGAGAGAGCAGACAGCATAGATTATCTTGCTGAAGACTTATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGCAGACAGCATAGATTATCTTGCTGAAGACTTATATTA  300

seq1  CTAAGTCTATAATAATACATGCTTTCTAAGATTTTATTTGCAAGGGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCTATAATAATACATGCTTTCTAAGATTTTATTTGCAAGGGAACC  350

seq1  CTTTTGTCAAGTTAGGACAAAGCATTGCCTTCTGTTTTATCTCCAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCAAGTTAGGACAAAGCATTGCCTTCTGTTTTATCTCCAAATGT  400

seq1  TTTCTTTCTAGGGCAGAGAGAGACCTGTAAATACAAGGACTTGAATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTAGGGCAGAGAGAGACCTGTAAATACAAGGACTTGAATTTAT  450

seq1  TCATCTATGTTCTATAATCTCAGAACACAGCACGATGCCAGATAGAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATGTTCTATAATCTCAGAACACAGCACGATGCCAGATAGAGTCA  500

seq1  GTAATTCACAAGGAAAGAGGCATGTCTGGATAATTAAATGATATACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCACAAGGAAAGAGGCATGTCTGGATAATTAAATGATATACAGCT  550

seq1  TATCCTCTGCTTTATCAAGAGTGAGATGATATTTAGATCTAGTTCAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTGCTTTATCAAGAGTGAGATGATATTTAGATCTAGTTCAAAAT  600

seq1  AAATATGCATTAGCCCAGCTTGCCAAACCTCCCATGCATATCATGGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCATTAGCCCAGCTTGCCAAACCTCCCATGCATATCATGGCTCA  650

seq1  TTCTGAGCACCATTTACCTCACAAACAGAAAGTGCTTTTCCTGATCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGCACCATTTACCTCACAAACAGAAAGTGCTTTTCCTGATCTCCA  700

seq1  GAAAGCTAATTAATAAATGCTCTAGTGTCAATCTTGATAAAGCTACTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTAATTAATAAATGCTCTAGTGTCAATCTTGATAAAGCTACTGAT  750

seq1  GTACACTAAAAACAAATTTGAGAATGTAGAGCTATGATTAAGGCAATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTAAAAACAAATTTGAGAATGTAGAGCTATGATTAAGGCAATTAA  800

seq1  ATACATGTTCCGTTGTCATTCATATCTTGATTATAAACTACTGTGGTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTTCCGTTGTCATTCATATCTTGATTATAAACTACTGTGGTATA  850

seq1  GACTGAAATTAACATGTACACATATTTTGCATCATTTGCCAAAGACTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAATTAACATGTACACATATTTTGCATCATTTGCCAAAGACTAGT  900

seq1  TTAAGTAATAATCATAATTTAAGATCACTTCCATATAAGCACTAAAATTG  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTAAGTAATAATCATAATTTAGGATCACTTCCATATAAGCACTAAAATTG  950

seq1  CCCCCTGTGTTCAAAGAG-TGTAGTCACA-GATATTTAGATGTAAATAAA  998
      ||| |||||||| ||||| |||||||||| |||| |||||||||||||||
seq2  CCCTCTGTGTTC-AAGAGTTGTAGTCACAGGATA-TTAGATGTAAATAAA  998

seq1  TGAGAAACTTGTATTCCTGCTT-AGGCTAAAAAATTGCCCATTACCTAAT  1047
      |||| |||||||||| |||||| ||||| |||||||| ||||||||||| 
seq2  TGAG-AACTTGTATT-CTGCTTAAGGCT-AAAAATTG-CCATTACCTAAA  1044

seq1  TGCAATTACACAGGCAT-GGCTTTCTC-TACTAGATTTCA  1085
      |||||||||||  |||| ||||||||| |||| |||||||
seq2  TGCAATTACACCAGCATGGGCTTTCTCTTACTGGATTTCA  1084


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