BAC Information

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BAC

Clone NameB6Ng01-093P24
Chromosome7 (Build37)
Map Location 9,109,962 - 9,216,977
singlet/doubletdoublet
Overlap geneEG628145, EG545909, LOC100042039
Upstream geneLOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110
Downstream geneLOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P24.bB6Ng01-093P24.g
ACCDH905334DH905335
length7991,041
definitionDH905334|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P24, 5' end.DH905335|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,109,962 - 9,110,751)(9,215,936 - 9,216,977)
sequence
gaattcaatgctaacagggtctacagacagagttccatggacagccaggg
agggctacatggagagatcctgcctcaaacaacaacaaaaacaacacaac
ttcaaacaaaaatacaatgacagtcagaagacataacactctagcacgtt
ggttctcaacatgtggatcatgatcttttaggggatatgtaagaccatca
ggaaacacagatatttacactaagattcatgacagtagtgaaactacagt
tatgaggtagaaatgataatttatggctggggatcaccataactagagga
actgtgataaagggtcctaggattagaaagagtgagcaccactgctcttg
cacatggttgcctaaagtggaaatccagcatgagtgatatgataaggtgg
aaagcagctacataaatttaatcatctgaatcgacatggtaggtgaaaaa
aagtgacttttccaaattgtactctgacttgcataagtgtagggacatac
acacgcacaccccttttttaggtgagtaagaactcatgaatttattgtct
tcattacaaaatcagcatagaactagatcactgtgcattggtgtttgcta
catctctgtctgcatctgtctctttgtctctctctgtctctcagtcactc
tggttggtttgttttttttgttttgcttttttgagacaggggtttctctg
tgtagctctggctgtcctgaaaactcactctgtagtccaggctgggcctt
gaaattttatcatctgcctgacatgtgtgccactgctcacatggctgaa
gaattcctcttgtagtttgatattaatagtttataggagcttcttcttat
gtttattcacatgcaaatgtggaatacataatctgtatcagtagttccag
atgttctgattatcgaattgacagtttgaattatattttcaaaaataaag
tattcttagtactaagctgggaacaactgtcattcaattgtctatcacta
actcatgcttaactcactactattcatttgaggtatgaagtaggatttca
tggtcttttcacctagctcattttcatatgtctatttttcataatgtgtt
atgaaaattttgttatattatgatggcttagttttgtttaatcttgtttt
attttactattctcccatagaatcctgtcattttctaatgagtgacataa
agtggatttgatgaaaaaggaagaaaatatgaatattaactatgatatat
ttgccaggagaactgacaattgttcacatcccagtagaagaaatggaaac
tgtaattaggatatattatgtgagaataacaagttattttcaataaataa
aacaatcaaaattaaaaacaaattctccctgttctcagagaatgatcttt
ctgttatgtgttgtgttcttttggtaggtgtttttgtcaagaattattcc
acacatattcatcaaatgtattgttcttgaatgaccttttttccctctca
ttaaacattattctgtttttttccattttttaataaaggaaagttctcct
tttgtatatgaatgtgtcttcctacctctgcaggcatcttaggaatgtct
taaaaaataaaccagttttgttgtcgtagatttcatttagagaatgttaa
caaaaaagttcaattatcactgaaaattatatgttgcttttgtctgggtg
ctgttattgctgtacttgagtgtgtcaatagcctttattttttctgtgtc
tattgctgtctataggttcctttgatctctgggtcatcttatggaaaaga
ggtgattggattctttcaaattactaaaagtcaatgtttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9109962_9110751
seq2: B6Ng01-093P24.b_46_844

seq1  GAATTCAATGCTAACAGGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTAACAGGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50

seq1  AGGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100

seq1  TTCAAACAAAAATACAATGACAGTCAGAAGACATAACACTCTAGCACGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAAAATACAATGACAGTCAGAAGACATAACACTCTAGCACGTT  150

seq1  GGTTCTCAACATGTGGATCATGATCTTTTAGGGGATATGTAAGACCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCAACATGTGGATCATGATCTTTTAGGGGATATGTAAGACCATCA  200

seq1  GGAAACACAGATATTTACACTAAGATTCATGACAGTAGTGAAACTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAGATATTTACACTAAGATTCATGACAGTAGTGAAACTACAGT  250

seq1  TATGAGGTAGAAATGATAATTTATGGCTGGGGATCACCATAACTAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGTAGAAATGATAATTTATGGCTGGGGATCACCATAACTAGAGGA  300

seq1  ACTGTGATAAAGGGTCCTAGGATTAGAAAGAGTGAGCACCACTGCTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATAAAGGGTCCTAGGATTAGAAAGAGTGAGCACCACTGCTCTTG  350

seq1  CACATGGTTGCCTAAAGTGGAAATCCAGCATGAGTGATATGATAAGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTTGCCTAAAGTGGAAATCCAGCATGAGTGATATGATAAGGTGG  400

seq1  AAAGCAGCTACATAAATTTAATCATCTGAATCGACATGGTAGGTGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCTACATAAATTTAATCATCTGAATCGACATGGTAGGTGAAAAA  450

seq1  AAGTGACTTTTCCAAATTGTACTCTGACTTGCATAAGTGTAGGGACATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACTTTTCCAAATTGTACTCTGACTTGCATAAGTGTAGGGACATAC  500

seq1  ACACGCACACCCCTTTTTTAGGTGAGTAAGAACTCATGAATTTATTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCACACCCCTTTTTTAGGTGAGTAAGAACTCATGAATTTATTGTCT  550

seq1  TCATTACAAAATCAGCATAGAACTAGATCACTGTGCATTGGTGTTTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACAAAATCAGCATAGAACTAGATCACTGTGCATTGGTGTTTGCTA  600

seq1  CATCTCTGTCTGCATCTGTCTCTTTGTCTCTCTCTGTCTCTCAGTCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGTCTGCATCTGTCTCTTTGTCTCTCTCTGTCTCTCAGTCACTC  650

seq1  TGGTTGGTTTGTTTTTT---GTTTGC-TTTTTGAGACA-GGGTTTCTCTG  695
      |||||||||||||||||    ||||| ||||||||||| |||||||||||
seq2  TGGTTGGTTTGTTTTTTTTGTTTTGCTTTTTTGAGACAGGGGTTTCTCTG  700

seq1  TGTAGCTCTGGCTGTCCTG-AAACTCACTCTGTAGTCCAGGCT-GGCCTT  743
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  TGTAGCTCTGGCTGTCCTGAAAACTCACTCTGTAGTCCAGGCTGGGCCTT  750

seq1  G-AACTTTATCATCTGCCTGACATGTGTGCCACTGC-CACATGGCTGCA  790
      | || ||||||||||||||||||||||||||||||| |||||||||| |
seq2  GAAATTTTATCATCTGCCTGACATGTGTGCCACTGCTCACATGGCTGAA  799

seq1: chr7_9215936_9216977
seq2: B6Ng01-093P24.g_67_1107 (reverse)

seq1  AGAAACA-TGACTTTTTAGTAAATTTGAAGAATCCATTCA-CTCTTTTCC  48
      ||||||| |||| ||||||||| ||  ||||||||| ||| |||||||||
seq2  AGAAACATTGAC-TTTTAGTAATTTGAAAGAATCCAATCACCTCTTTTCC  49

seq1  ATAAGATGACCAGAAGATCAAAGGAACCTATAGACAGCAATAGAACACAG  98
      |||||||||||   ||||||||||||||||||||||||||||| ||||||
seq2  ATAAGATGACCCAGAGATCAAAGGAACCTATAGACAGCAATAG-ACACAG  98

seq1  AAAAAATAAAGGCTATTGACACACCTCAAGTACAGCAATAACAGCAACCA  148
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  AAAAAATAAAGGCTATTGACACA-CTCAAGTACAGCAATAACAGCACCCA  147

seq1  GACAAAAGCAACATATAATTTTCAGTGATAATTGAACTTTTTTGTTAACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGCAACATATAATTTTCAGTGATAATTGAACTTTTTTGTTAACA  197

seq1  TTCTCTAAATGAAATCTACGACAACAAAACTGGTTTATTTTTTAAGACAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAATGAAATCTACGACAACAAAACTGGTTTATTTTTTAAGACAT  247

seq1  TCCTAAGATGCCTGCAGAGGTAGGAAGACACATTCATATACAAAAGGAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGATGCCTGCAGAGGTAGGAAGACACATTCATATACAAAAGGAGA  297

seq1  ACTTTCCTTTATTAAAAAATGGAAAAAAACAGAATAATGTTTAATGAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTTATTAAAAAATGGAAAAAAACAGAATAATGTTTAATGAGAG  347

seq1  GGAAAAAAGGTCATTCAAGAACAATACATTTGATGAATATGTGTGGAATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAGGTCATTCAAGAACAATACATTTGATGAATATGTGTGGAATA  397

seq1  ATTCTTGACAAAAACACCTACCAAAAGAACACAACACATAACAGAAAGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGACAAAAACACCTACCAAAAGAACACAACACATAACAGAAAGAT  447

seq1  CATTCTCTGAGAACAGGGAGAATTTGTTTTTAATTTTGATTGTTTTATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGAGAACAGGGAGAATTTGTTTTTAATTTTGATTGTTTTATTT  497

seq1  ATTGAAAATAACTTGTTATTCTCACATAATATATCCTAATTACAGTTTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATAACTTGTTATTCTCACATAATATATCCTAATTACAGTTTCC  547

seq1  ATTTCTTCTACTGGGATGTGAACAATTGTCAGTTCTCCTGGCAAATATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTACTGGGATGTGAACAATTGTCAGTTCTCCTGGCAAATATAT  597

seq1  CATAGTTAATATTCATATTTTCTTCCTTTTTCATCAAATCCACTTTATGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTAATATTCATATTTTCTTCCTTTTTCATCAAATCCACTTTATGT  647

seq1  CACTCATTAGAAAATGACAGGATTCTATGGGAGAATAGTAAAATAAAACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTAGAAAATGACAGGATTCTATGGGAGAATAGTAAAATAAAACA  697

seq1  AGATTAAACAAAACTAAGCCATCATAATATAACAAAATTTTCATAACACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAACAAAACTAAGCCATCATAATATAACAAAATTTTCATAACACA  747

seq1  TTATGAAAAATAGACATATGAAAATGAGCTAGGTGAAAAGACCATGAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAAATAGACATATGAAAATGAGCTAGGTGAAAAGACCATGAAAT  797

seq1  CCTACTTCATACCTCAAATGAATAGTAGTGAGTTAAGCATGAGTTAGTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTCATACCTCAAATGAATAGTAGTGAGTTAAGCATGAGTTAGTGA  847

seq1  TAGACAATTGAATGACAGTTGTTCCCAGCTTAGTACTAAGAATACTTTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAATTGAATGACAGTTGTTCCCAGCTTAGTACTAAGAATACTTTAT  897

seq1  TTTTGAAAATATAATTCAAACTGTCAATTCGATAATCAGAACATCTGGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAATATAATTCAAACTGTCAATTCGATAATCAGAACATCTGGAA  947

seq1  CTACTGATACAGATTATGTATTCCACATTTGCATGTGAATAAACATAAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGATACAGATTATGTATTCCACATTTGCATGTGAATAAACATAAGA  997

seq1  AGAAGCTCCTATAAACTATTAATATCAAACTACAAGAGGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCCTATAAACTATTAATATCAAACTACAAGAGGAATTC  1041