BAC Information

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BAC

Clone NameB6Ng01-094I17
Chromosome7 (Build37)
Map Location 140,304,899 - 140,422,906
singlet/doubletdoublet
Overlap geneCtbp2
Upstream geneCpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1
Downstream geneLOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12, A130023I24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094I17.bB6Ng01-094I17.g
ACCDH905738DH905739
length625404
definitionDH905738|Mus musculus domesticus DNA, BAC clone: B6Ng01-094I17, 5' end.DH905739|Mus musculus domesticus DNA, BAC clone: B6Ng01-094I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,304,899 - 140,305,523)(140,422,497 - 140,422,906)
sequence
gaattctttccagacagccagaaacttccaaagacctcccaggtttgaat
agtcacttcaagattacactgagagtaattggagagaaagctcaacagtc
aagaccactgactgctctttcaggacctggatgcatacaggctcgcacac
acccatgcacccacaatggctgttaactccagtttcatccagagggtcag
atgccctcttctggtgtttgcatgtactgtgtgcacaaagtttcgtgcag
gcaaaacatacacataaaataaaagtgtgtttttaaaatacagagaagcc
tgatctcgtagtacagtacaggtcttagctgctcaggaggagactgaggc
tgcccagtgaatttaagagcagcctggtatcttcgggagaaaagggatga
gatatagctgagtgtgcttgcctagcttatgcaggagaccctaggtaccc
taagctagatctccagtacaaagtgaagggaacctaccagcaggtggtga
tgcgcgcatacacacctcattccaatacttggggaaaggaagattgtgag
ttggaagccaccctacaaaacatagcaagactgtccccacacacactgtg
tgtgtgtgtgtgtgtgtgtgtgtgt
agtgcaggatgcacttccattgcttacagcctaccttgttcacccctgct
cccttcttagcccagggtcctcagaggcatctggggagcccggtgtctgg
gagctatggtgctaacctcctccaagacagcctcatgcccatggcccagt
gcccatgagcatgtgaacagcactcagatggccacctactaccggccaaa
cttgtcccatcactgcctgcttacatgtggctggcaagtgccactcaagc
tgcttcacggactagaatgaccatcccaccttgtggccagctcagggact
gcctgaccctcagctctttcccctcttcccagtgttctctctctctctct
ctctctctctctctctctctctctctctctctctctttctctctatctcc
ctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_140304899_140305523
seq2: B6Ng01-094I17.b_45_669

seq1  GAATTCTTTCCAGACAGCCAGAAACTTTCAAAGACCTCCCAGGTTTGAAT  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATTCTTTCCAGACAGCCAGAAACTTCCAAAGACCTCCCAGGTTTGAAT  50

seq1  AGTCACTTCAAGATTACACTGAGAGTAATTGGAGAGAAAGCTCAACAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTCAAGATTACACTGAGAGTAATTGGAGAGAAAGCTCAACAGTC  100

seq1  AAGACCACTGACTGCTCTTTCAGGACCTGGATGCATACAGGCTCGCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACTGACTGCTCTTTCAGGACCTGGATGCATACAGGCTCGCACAC  150

seq1  ACCCATGCACCCACAATGGCTGTTAACTCCAGTTTCATCCAGAGGGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGCACCCACAATGGCTGTTAACTCCAGTTTCATCCAGAGGGTCAG  200

seq1  ATGCCCTCTTCTGGTGTTTGCATGTACTGTGTGCACAAAGTTTCGTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTCTTCTGGTGTTTGCATGTACTGTGTGCACAAAGTTTCGTGCAG  250

seq1  GCAAAACATACACATAAAATAAAAGTGTGTTTTTAAAATACAGAGAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACATACACATAAAATAAAAGTGTGTTTTTAAAATACAGAGAAGCC  300

seq1  TGATCTCGTAGTACAGTACAGGTCTTAGCTGCTCAGGAGGAGACTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCGTAGTACAGTACAGGTCTTAGCTGCTCAGGAGGAGACTGAGGC  350

seq1  TGCCCAGTGAATTTAAGAGCAGCCTGGTATCTTCGGGAGAAAAGGGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGTGAATTTAAGAGCAGCCTGGTATCTTCGGGAGAAAAGGGATGA  400

seq1  GATATAGCTGAGTGTGCTTGCCTAGCTTATGCAGGAGACCCTAGGTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGCTGAGTGTGCTTGCCTAGCTTATGCAGGAGACCCTAGGTACCC  450

seq1  TAAGCTAGATCTCCAGTACAAAGTGAAGGGAACCTACCAGCAGGTGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTAGATCTCCAGTACAAAGTGAAGGGAACCTACCAGCAGGTGGTGA  500

seq1  TGCGCGCATACACACCTCATTCCAATACTTGGGGAAAGGAAGATTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCGCATACACACCTCATTCCAATACTTGGGGAAAGGAAGATTGTGAG  550

seq1  TTGGAAGCCACCCTACAAAACATAGCAAGACTGTCCCCACACACACTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGCCACCCTACAAAACATAGCAAGACTGTCCCCACACACACTGTG  600

seq1  TGTGTGTGTGTGTGTGTGTGTGTGT  625
      |||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGT  625

seq1: chr7_140422497_140422906
seq2: B6Ng01-094I17.g_66_475 (reverse)

seq1  AGAGAGAGAGAGAGAGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50
      |||| |||| |||||| |||||||||||||||||||||||||||||||||
seq2  AGAGGGAGATAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50

seq1  AGAGAGAGAGAGAGAGAGAACACTGGGAAGAGGGGAAAGAGCTGAGGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAACACTGGGAAGAGGGGAAAGAGCTGAGGGTC  100

seq1  AGGCAGTCCCTGAGCTGGCCACAAGGTGGGATGGTCATTCTAGTCCGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTCCCTGAGCTGGCCACAAGGTGGGATGGTCATTCTAGTCCGTGA  150

seq1  AGCAGCTTGAGTGGCACTTGCCAGCCACATGTAAGCAGGCAGTGATGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTGAGTGGCACTTGCCAGCCACATGTAAGCAGGCAGTGATGGGA  200

seq1  CAAGTTTGGCCGGTAGTAGGTGGCCATCTGAGTGCTGTTCACATGCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTGGCCGGTAGTAGGTGGCCATCTGAGTGCTGTTCACATGCTCAT  250

seq1  GGGCACTGGGCCATGGGCATGAGGCTGTCTTGGAGGAGGTTAGCACCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTGGGCCATGGGCATGAGGCTGTCTTGGAGGAGGTTAGCACCATA  300

seq1  GCTCCCAGACACCGGGCTCCCCAGATGCCTCTGAGGACCCTGGGCTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGACACCGGGCTCCCCAGATGCCTCTGAGGACCCTGGGCTAAGA  350

seq1  AGGGAGCAGGGGTGAACAAGGTAGGCTGTAAGCAATGGAAGTGCATCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCAGGGGTGAACAAGGTAGGCTGTAAGCAATGGAAGTGCATCCTG  400

seq1  CACTGAATTC  410
      ||||||||||
seq2  CACTGAATTC  410