BAC Information

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BAC

Clone NameB6Ng01-094O05
Chromosome7 (Build37)
Map Location 149,948,848 - 149,950,069
singlet/doubletsinglet
Overlap genenone
Upstream geneMuc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264
Downstream geneEG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094O05.bB6Ng01-094O05.g
ACCDH905981DH905982
length5071,190
definitionDH905981|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O05, 5' end.DH905982|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttctgaggccagaaactgcagtctctggcatttagcacctcatagtaaaa
cagtgggggattaagcaaaaggatttattgctggcgcttctttccctgat
gaatcagcaagaaacctttctggctaagctggttaactctttgtgtacca
gagagaaaggaggagaaaagaattaagatgctttatacaggcaaaaaatg
cacagacacatatacattcatacacccacattctggccagtcagactctc
acaatcaacttaagtattcatgcatgcttacatatatacatttacccaca
aaaacacacatatagacaaacagacatatacatttggatggatggatgga
tggatggatggatggttgaataggacagagttcccaaccattcaaccaac
aactttgttttttctctggtcttcttacatcttcttagacaaaaagctct
ttagaaaattaccgcaatgctcacagtcagctatatgaaagggtcacaag
acctcat
gaattctcactgtgattaaaggccttctctcaagtcttgtgaagttttca
tgcattgcccaggttttgaatgtggactaaaacgtcctatagattttcac
aggaatgtaaatcatgacccaggttctcactgaggcctaaacatttccca
agttctcaagagttccataagtagttccatgagttttcactgggtttagg
cccccatgtctcagtgttgaagcggaaatttctggtttctatggggactc
agttatgtcatgtgatgttttgctgaagcaaacacaggtgaaaggatgtt
ttgttgaagcagacatgtgaaaggatgaatagaaacaatataaatttaac
ccatggacagtgttataaagctcttgaattggtttgccttgtaccatgtc
gatgatcttcacttgtcttgactgtatagagagtaattctccagagaact
ttttataatactctgaggactcctgctgaatggtggagtctctcagacat
ttttcaggatagtattgccactgctgattaatgcttggtatttgttagtg
cagtagagtgctgacaacaaagattggaatagtccccaatgaactatttc
taaacaggtttgcaacccccattcctattaacctttcttttctgacctgg
ttctcgggtcagtcaatggggtctgcaagagagaatgtggggactgaggg
gcaaaagacatgaagaatggagacaaaacagtctgtctgctcaagttttg
agtctcatttatttggaaggcaactatgggtatatattcactcaccgggg
agtgcagctagagacacttaaccacaggtccaggatctgtaggagaaaaa
caagatgttatcagagtgtgttcagctgtggtgggcttcttgcaaaaatg
tgctagaaacaagtctcttgtcaggtggaaagtactacctgtagtaaata
gcctgagatggctgcagagatgatagccactttttgctagagttggctcc
aacacttttcccctaccacttgtgggcttccaagtgtccctcaatcttaa
agccttgcctgttccattccagcaggacttagttatttcatgggtgggaa
ggaataggctgaaagaaaataaatgggaaagggaagcgacagcaaagtgt
cagtctatttatgagcttgacctgattaagcacagtgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149948848_149950069
seq2: B6Ng01-094O05.g_70_1259

seq1  GAATTCTCACTGTGATTAAAGGCCTTCTCTCAAGTCTTGTGAAGTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTGTGATTAAAGGCCTTCTCTCAAGTCTTGTGAAGTTTTCA  50

seq1  TGCATTGCCCAGGTTTTGAATGTGGACTAAAACGTCCTATAGATTTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCCCAGGTTTTGAATGTGGACTAAAACGTCCTATAGATTTTCAC  100

seq1  AGGAATGTAAATCATGACCCAGGTTCTCACTGAGGCCTAAACATTTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGTAAATCATGACCCAGGTTCTCACTGAGGCCTAAACATTTCCCA  150

seq1  AGTTCTCAAGAGTTCCATAAGTAGTTCCATGAGTTTTCACTGGGTTTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAAGAGTTCCATAAGTAGTTCCATGAGTTTTCACTGGGTTTAGG  200

seq1  CCCCCATGTCTCAGTGTTGAAGCGGAAATTTCTGGTTTCTATGGGGACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATGTCTCAGTGTTGAAGCGGAAATTTCTGGTTTCTATGGGGACTC  250

seq1  AGTTATGTCATGTGATGTTTTGCTGAAGCAAACACAGGTGAAAGGATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTCATGTGATGTTTTGCTGAAGCAAACACAGGTGAAAGGATGTT  300

seq1  TTGTTGAAGCAGACATGTGAAAGGATGAATAGAAACAATATAAATTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGCAGACATGTGAAAGGATGAATAGAAACAATATAAATTTAAC  350

seq1  CCATGGACAGTGTTATAAAGCTCTTGAATTGGTTTGCCTTGTACCATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGACAGTGTTATAAAGCTCTTGAATTGGTTTGCCTTGTACCATGTC  400

seq1  GATGATCTTCACTTGTCTTGACTGTATAGAGAGTAATTCTCCAGAGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCTTCACTTGTCTTGACTGTATAGAGAGTAATTCTCCAGAGAACT  450

seq1  TTTTATAATACTCTGAGGACTCCTGCTGAATGGTGGAGTCTCTCAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATACTCTGAGGACTCCTGCTGAATGGTGGAGTCTCTCAGACAT  500

seq1  TTTTCAGGATAGTATTGCCACTGCTGATTAATGCTTGGTATTTGTTAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGATAGTATTGCCACTGCTGATTAATGCTTGGTATTTGTTAGTG  550

seq1  CAGTAGAGTGCTGACAACAAAGATTGGAATAGTCCCCAATGAACTATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGTGCTGACAACAAAGATTGGAATAGTCCCCAATGAACTATTTC  600

seq1  TAAACAGGTTTGCAACCCCCATTCCTATTAACCTTTCTTTTCTGACCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGGTTTGCAACCCCCATTCCTATTAACCTTTCTTTTCTGACCTGG  650

seq1  TTCTCGGGTCAGTCAATGGGGTCTGCAAGAGAGAATGTGGGGACTGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGGGTCAGTCAATGGGGTCTGCAAGAGAGAATGTGGGGACTGAGGG  700

seq1  GCAAAAGACATGAAGAATGGAGACAAAACAGTCTGTCTGCTCAAGTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGACATGAAGAATGGAGACAAAACAGTCTGTCTGCTCAAGTTTTG  750

seq1  AGTCTCATTTATTTGGAAGGCAACTATGGGTATATATTCACTCACCGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATTTATTTGGAAGGCAACTATGGGTATATATTCACTCACCGGGG  800

seq1  AGTGCAGCTAGAGACACTTAACCACAGGTCCAGGATCTGTAGGAGAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGCTAGAGACACTTAACCACAGGTCCAGGATCTGTAGGAGAAAAA  850

seq1  CAAGATGTTATCAGAGTGTGTTCAGCTGTGGTGGGCTTCTTGCAAAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTTATCAGAGTGTGTTCAGCTGTGGTGGGCTTCTTGCAAAAATG  900

seq1  TGCTAGGAAAACAAGTCTCTTGTCAGGGTGGAAAAGTACTACCTGTAAGT  950
      ||||||  ||||||||||||||||| ||||| |||||||||||||| |||
seq2  TGCTAG--AAACAAGTCTCTTGTCA-GGTGG-AAAGTACTACCTGT-AGT  945

seq1  AAATAGCCTGAGATGGCTGCAGAGATGATAGCCACTTTTTGCTAAGAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAATAGCCTGAGATGGCTGCAGAGATGATAGCCACTTTTTGCT-AGAGTT  994

seq1  GGCTCCCAACACTTTTCCCCTACCACTTGTGGGCCTTCCCAGGTTGTCTC  1050
      |||| |||||||||||||||||||||||||||| ||||| ||  |||| |
seq2  GGCT-CCAACACTTTTCCCCTACCACTTGTGGG-CTTCCAAG--TGTCCC  1040

seq1  TCAATCTTAAAGCCTTGCCTGTCCCA-TCCAGCAGGACTTAGTTATTCCA  1099
      |||||||||||||||||||||| ||| |||||||||||||||||||| ||
seq2  TCAATCTTAAAGCCTTGCCTGTTCCATTCCAGCAGGACTTAGTTATTTCA  1090

seq1  TGGGTTGAGAAGGATCAGGGCCTGAAAGAAAAATGAGTGGAGAAAGGGAA  1149
      |||| || ||||||  |||  ||||||| ||||| | ||| |||||||||
seq2  TGGG-TGGGAAGGAATAGG--CTGAAAG-AAAATAAATGG-GAAAGGGAA  1135

seq1  GCAGAACCAAGCAAAGAGTTGTCAAGGTCTATTTAATGAAGGCTAGGAGC  1199
      || ||    |||||||   |||||  |||||||| ||||  ||| |   |
seq2  GC-GA---CAGCAAAG---TGTCA--GTCTATTT-ATGA--GCTTG--AC  1171

seq1  CTGATTATAAGCACACAGTGAGA  1222
      |||||  ||||  ||||||||||
seq2  CTGAT--TAAG--CACAGTGAGA  1190