BAC Information

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BAC

Clone NameB6Ng01-094P11
Chromosome7 (Build37)
Map Location 29,180,163 - 29,363,756
singlet/doubletdoublet
Overlap genePaf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4
Upstream geneSpnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl
Downstream geneC330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P11.bB6Ng01-094P11.g
ACCDH906034DH906035
length1,098900
definitionDH906034|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P11, 5' end.DH906035|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,180,163 - 29,181,264)(29,362,855 - 29,363,756)
sequence
gaattcaagaatggaaaaactactaaaaaatagttcattgatggcaagga
ctgcttatttcattgcctcaaccttcctcggactggcacataggaggtgc
tcagtaactactaatagagaaagcagtatgcaatacccttcttactcaga
agttgccaatgctggacgcttgcattcagagttcctctccatagaagctt
agcttctaggaagggagcatgttggggcgtgagggtggatcataaaactg
taacagtcatgttttcccttctaggtttgttcagtacaaagcaacctcct
tggagaaacagcacaaacatgacctcctgactgagccagatctgggggtc
accattgatctcatcaaccctgacacctaccgcattgatcccaatggtgt
gtggggagacagggagggtctgttccaggccagcaaaggccaggcctggg
tatccctcatggtcctcctgccccttaccccctagttcttctggatccgg
ctgatgagaagcttctagaagaggagattcaggctcccaccagctctaag
aggtgaggtgggtcccacaggtactgggtggactttgtcaagcatgggac
cctgaggtgcctggttttcctcttcagatcccagcagcatgcaaaggtgg
taccgtggatgcgtaagacagagtatatctccactgagttcaacagatat
ggcatctccaatgagaagcctgaagtcaagtaagtaacaaacaggtggga
agggggcaagactttagcaatgtccagaggcccttaatgacattttcttc
actgctaggattggggtttctgtgaaacagcagttcacagaggaagaaat
atacaaagacagggacagcccaaatcacagccattgaaaagacttttgaa
gatgcccagaaatcggtaattggggggaatagaatagaggcagagtgtgg
ctcaggtctttctctttctcaccctttttgtctatcgaatctccagcatt
acagcaagcccgagtgacaccagtgagtcatgcctgtcttccaattttaa
ggtcagactcaagggaaagaggtcgggggttgcttactttgtgcctgt
gaattcactgtagctcacgttggccttgaccttggggtgatcctcctgac
tcttgggaccatcatcctttgcttttcctttttgttttgccacctttggt
aaagtctcagaactgactcctccctggacatttgtgctttatcatgatag
gccctcagtcctgttacagaggactcccatgcaggtcagccatcagcttc
caagctgcccttgtagggacccaggaggtcacagtggaggtcctggttcc
cgtgtctggtgaaccttagcacggactcatgggctagcaccttgcttgtg
ttgtacccacgagagtacttaccaggtcctcagtgtgtttccacctgact
gctgctgcctacagcctccgtcctccctcccaagcgccgtgtggcagggc
atgcttcgaagtaggacaaggtgctgtgtatgtcacatgctgcattttgt
agggctctttaaagagtgcaggtgtgttcggagaactcatgggtctctcc
aaaggaaaaactcaagggcagtggggtgggcatatcctgcctctatttac
cctttggtgccttttggcattggtaccatgtgactgtaactagaaacaca
ggccgagatgaaaaggacagagacagacaagctcctgtgtgacaagccat
gattagtgagtcacccactcagcactcctcctcttggacctgtttcctgg
agctgaccagagctggtcaggctgcatcacctcccccaccagagctcaaa
cctgctggtctggtttgggaaggtggccctatctggcttgtctctgggtg
attgcttcctaggtaccctgcccccacagggagtggtaaccagagacctg
gaatgtggggtctcccaagctctgttctgtggtggggagggggtgagact

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29180163_29181264
seq2: B6Ng01-094P11.b_47_1144

seq1  GAATTCAAGAATGGAAAAACTACTAAAAAATAGTTCATTGATGGCAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAATGGAAAAACTACTAAAAAATAGTTCATTGATGGCAAGGA  50

seq1  CTGCTTATTTCATTGCCTCAACCTTCCTCGGACTGGCACATAGGAGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTATTTCATTGCCTCAACCTTCCTCGGACTGGCACATAGGAGGTGC  100

seq1  TCAGTAACTACTAATAGAGAAAGCAGTATGCAATACCCTTCTTACTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAACTACTAATAGAGAAAGCAGTATGCAATACCCTTCTTACTCAGA  150

seq1  AGTTGCCAATGCTGGACGCTTGCATTCAGAGTTCCTCTCCATAGAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCAATGCTGGACGCTTGCATTCAGAGTTCCTCTCCATAGAAGCTT  200

seq1  AGCTTCTAGGAAGGGAGCATGTTGGGGCGTGAGGGTGGATCATAAAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTAGGAAGGGAGCATGTTGGGGCGTGAGGGTGGATCATAAAACTG  250

seq1  TAACAGTCATGTTTTCCCTTCTAGGTTTGTTCAGTACAAAGCAACCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCATGTTTTCCCTTCTAGGTTTGTTCAGTACAAAGCAACCTCCT  300

seq1  TGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGATCTGGGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGATCTGGGGGTC  350

seq1  ACCATTGATCTCATCAACCCTGACACCTACCGCATTGATCCCAATGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGATCTCATCAACCCTGACACCTACCGCATTGATCCCAATGGTGT  400

seq1  GTGGGGAGACAGGGAGGGTCTGTTCCAGGCCAGCAAAGGCCAGGCCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGACAGGGAGGGTCTGTTCCAGGCCAGCAAAGGCCAGGCCTGGG  450

seq1  TATCCCTCATGGTCCTCCTGCCCCTTACCCCCTAGTTCTTCTGGATCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTCATGGTCCTCCTGCCCCTTACCCCCTAGTTCTTCTGGATCCGG  500

seq1  CTGATGAGAAGCTTCTAGAAGAGGAGATTCAGGCTCCCACCAGCTCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGAGAAGCTTCTAGAAGAGGAGATTCAGGCTCCCACCAGCTCTAAG  550

seq1  AGGTGAGGTGGGTCCCACAGGTACTGGGTGGACTTTGTCAAGCATGGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGTGGGTCCCACAGGTACTGGGTGGACTTTGTCAAGCATGGGAC  600

seq1  CCTGAGGTGCCTGGTTTTCCTCTTCAGATCCCAGCAGCATGCAAAGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGTGCCTGGTTTTCCTCTTCAGATCCCAGCAGCATGCAAAGGTGG  650

seq1  TACCGTGGATGCGTAAGACAGAGTATATCTCCACTGAGTTCAACAGATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTGGATGCGTAAGACAGAGTATATCTCCACTGAGTTCAACAGATAT  700

seq1  GGCATCTCCAATGAGAAGCCTGAAGTCAAGTAAGTAACAAACAGGTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTCCAATGAGAAGCCTGAAGTCAAGTAAGTAACAAACAGGTGGGA  750

seq1  AGGGGGCAAGACTTTAGCAATGTCCAGAGGCCCTTAATGACATTTTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCAAGACTTTAGCAATGTCCAGAGGCCCTTAATGACATTTTCTTC  800

seq1  ACTGCTAGGATTGGGGTTTCTGTGAAACAGCAGTTCACAGAGGAAGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTAGGATTGGGGTTTCTGTGAAACAGCAGTTCACAGAGGAAGAAAT  850

seq1  ATACAAAGACAGGGACAG-CCAAATCACAGCCATTGAAAAGACTTTTGAA  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATACAAAGACAGGGACAGCCCAAATCACAGCCATTGAAAAGACTTTTGAA  900

seq1  GATGCCCAGAAATCGGTAATTGGGGGGAATAGAATAGAGGCAAGAGTGTG  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GATGCCCAGAAATCGGTAATTGGGGGGAATAGAATAGAGGC-AGAGTGTG  949

seq1  GCTCAGGGTCTTCCTCTTTCTCACCCTTTTTGTTCTATCAGATCTCCCAG  999
      ||||| |||||| ||||||||||||||||||| ||||||  |||| ||||
seq2  GCTCA-GGTCTTTCTCTTTCTCACCCTTTTTG-TCTATCGAATCT-CCAG  996

seq1  CATTACAGCAAGCCCCGAGTGACACCAGTGGAGGTCATGCCTGTCTTCCC  1049
      |||||||||||| |||||||||||||||||   |||||||||||||||| 
seq2  CATTACAGCAAG-CCCGAGTGACACCAGTG--AGTCATGCCTGTCTTCC-  1042

seq1  AGATTTTAAGGTCAGACTC-AGGGAAAGAGG-CGGGGGTTGC-TAC-TTG  1095
        ||||||||||||||||| ||||||||||| |||||||||| ||| |||
seq2  -AATTTTAAGGTCAGACTCAAGGGAAAGAGGTCGGGGGTTGCTTACTTTG  1091

seq1  TGCCTGT  1102
      |||||||
seq2  TGCCTGT  1098

seq1: chr7_29362855_29363756
seq2: B6Ng01-094P11.g_70_969 (reverse)

seq1  AGTCTCACCCCCTCCCCACCACAGAACAGAGCTTGGGAGACCCCACATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTCTCACCCCCTCCCCACCACAGAACAGAGCTTGGGAGACCCCACATT-  49

seq1  CCAGGTCTCTGGTTACCACCTCCCTGTGGGGGCAGGGTACCTAGGAAGCA  100
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCAGGTCTCTGGTTACCA-CTCCCTGTGGGGGCAGGGTACCTAGGAAGCA  98

seq1  ATCACCCAGAGACAAGCCAGATAGGGCCACCTTCCCAAACCAGACCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCAGAGACAAGCCAGATAGGGCCACCTTCCCAAACCAGACCAGCA  148

seq1  GGTTTGAGCTCTGGTGGGGGAGGTGATGCAGCCTGACCAGCTCTGGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAGCTCTGGTGGGGGAGGTGATGCAGCCTGACCAGCTCTGGTCAG  198

seq1  CTCCAGGAAACAGGTCCAAGAGGAGGAGTGCTGAGTGGGTGACTCACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGAAACAGGTCCAAGAGGAGGAGTGCTGAGTGGGTGACTCACTAA  248

seq1  TCATGGCTTGTCACACAGGAGCTTGTCTGTCTCTGTCCTTTTCATCTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTTGTCACACAGGAGCTTGTCTGTCTCTGTCCTTTTCATCTCGG  298

seq1  CCTGTGTTTCTAGTTACAGTCACATGGTACCAATGCCAAAAGGCACCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTTCTAGTTACAGTCACATGGTACCAATGCCAAAAGGCACCAAA  348

seq1  GGGTAAATAGAGGCAGGATATGCCCACCCCACTGCCCTTGAGTTTTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATAGAGGCAGGATATGCCCACCCCACTGCCCTTGAGTTTTTCCT  398

seq1  TTGGAGAGACCCATGAGTTCTCCGAACACACCTGCACTCTTTAAAGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGACCCATGAGTTCTCCGAACACACCTGCACTCTTTAAAGAGCC  448

seq1  CTACAAAATGCAGCATGTGACATACACAGCACCTTGTCCTACTTCGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAATGCAGCATGTGACATACACAGCACCTTGTCCTACTTCGAAGC  498

seq1  ATGCCCTGCCACACGGCGCTTGGGAGGGAGGACGGAGGCTGTAGGCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTGCCACACGGCGCTTGGGAGGGAGGACGGAGGCTGTAGGCAGCA  548

seq1  GCAGTCAGGTGGAAACACACTGAGGACCTGGTAAGTACTCTCGTGGGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGGTGGAAACACACTGAGGACCTGGTAAGTACTCTCGTGGGTAC  598

seq1  AACACAAGCAAGGTGCTAGCCCATGAGTCCGTGCTAAGGTTCACCAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGCAAGGTGCTAGCCCATGAGTCCGTGCTAAGGTTCACCAGACA  648

seq1  CGGGAACCAGGACCTCCACTGTGACCTCCTGGGTCCCTACAAGGGCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAACCAGGACCTCCACTGTGACCTCCTGGGTCCCTACAAGGGCAGCT  698

seq1  TGGAAGCTGATGGCTGACCTGCATGGGAGTCCTCTGTAACAGGACTGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTGATGGCTGACCTGCATGGGAGTCCTCTGTAACAGGACTGAGG  748

seq1  GCCTATCATGATAAAGCACAAATGTCCAGGGAGGAGTCAGTTCTGAGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATCATGATAAAGCACAAATGTCCAGGGAGGAGTCAGTTCTGAGACT  798

seq1  TTACCAAAGGTGGCAAAACAAAAAGGAAAAGCAAAGGATGATGGTCCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAAGGTGGCAAAACAAAAAGGAAAAGCAAAGGATGATGGTCCCAA  848

seq1  GAGTCAGGAGGATCACCCCAAGGTCAAGGCCAACGTGAGCTACAGTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGAGGATCACCCCAAGGTCAAGGCCAACGTGAGCTACAGTGAAT  898

seq1  TC  902
      ||
seq2  TC  900