BAC Information

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BAC

Clone NameB6Ng01-095E13
Chromosome7 (Build37)
Map Location 32,429,904 - 32,578,031
singlet/doubletdoublet
Overlap geneLOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343
Upstream gene3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233
Downstream geneEG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095E13.bB6Ng01-095E13.g
ACCDH906267DH906268
length9841,000
definitionDH906267|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E13, 5' end.DH906268|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,577,321 - 32,578,031)(32,429,904 - 32,430,626)
sequence
gaattctggaacaactcatctctatatccacaatatacaggtgacatttg
tcgttttcttcagcttcctgagtatgctgaccaacttgtatagatcagta
tcatggctcctttcgcaaagctggaggaggatgtatagtgctaaatctta
cccaggaacagaagcagacctccagcaatggattctctctggcacagtat
gttgtctatggaaaaagatctgacccttccaaggcaacttccaaaacagt
caagaaaaataatgatcttgtaggatgtggctgaaaggtaggaatgtagt
taggcttataagaagctacagtgggacagctgtggcttcaaagtttcatg
ctccttgaaactttccacacaaagccacctctaatggggcagtattagga
gatggggctattggtgtgtgataagaatccactgtaccttttgttagcta
ctttgtgggttcttttttcttccacgttccctcatcctctttcttccacc
atttcaaactcctaacactaaatgagagattttttgttcgtttgtttgtt
tttttctttttttgtttgttttgaaaacaacatggaggggaaaggaaata
gatcccagaataaaatcagtggtcagaaaggtggcaatattatcattaga
ctacttcttgataatttgggcaatgacctcatgaggtaacgttgaacttt
cttgtcaggatatataatttcttcttactattttaattttacacctgact
actaaaaagaccatgactaacaacaatcaaccacccttctcaggaccata
gcaattatacagcctctaaaatgtccccagaattctatacatcacaaatc
acataaactatttgtagctggcaaaattaatgcctgtgctagagagtgaa
gcaaatcatagtctaaacagtgaaattgtgaggcttccctcacatcctac
acctgagataaaatatctctgtgtgttttttttt
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaacgctgaga
acggctaagatgaaaaattcaggtgacagcagatgctggcgaagatgtgg
agaaagaggtgcattcctccgttgttgaggtctccctcggacccacaaat
aactgaatccctcgggaggggatacaccacaggttcttttattattcaga
cttctttttgctatcctaggttttttattattccagatgaattttcaaat
tgccctttctaactcagtgaagaattgagttgcaattttgttggagagtg
cattaaatgtgtagattgctttcggcaggatagccattttgaatattaat
ccttccaatccatgagcatagtagatctttccatcttatgagatcttctt
caatttctttgtttagaaatttgaacttgttatcatagagatctttcact
tccttagagtcacacaaaagtattttatattatttgtgactattgtgagg
ggtgttgtttctctaatttttttctcagtcggtttatcctttgtgtagag
aaaagtcattgatttgtttgaggtaatattatatccagctacttcactga
atctgtttgtcaggtttagaagttctcttgtagaaattttagggtcacat
acataaactatcatatcatctggaaggaatgatattttgacttcttcctt
tccaatttgtatccccttgatctcctgttgttgtcgaattgctctggctg
ggaattcaactactatattgaaataggtacagagtgagggggcagccttc
tctaatcactgattttagtgggattgcttcgagtttctctccatttagat
ggatgttagctactagtttgttgtatatacttttatatgtttagtatggg
ccttgaattctgaacttctgagctttatatcatgaagttgtgttggattt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32577321_32578031
seq2: B6Ng01-095E13.b_49_759 (reverse)

seq1  ATCCTGACAAGAAAGTTCAACGTTACCTCATGAGGTCATTGCCCAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACAAGAAAGTTCAACGTTACCTCATGAGGTCATTGCCCAAATTA  50

seq1  TCAAGAAGTAGTCTAATGATAATATTGCCACCTTTCTGACCACTGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGTAGTCTAATGATAATATTGCCACCTTTCTGACCACTGATTTT  100

seq1  ATTCTGGGATCTATTTCCTTTCCCCTCCATGTTGTTTTCAAAACAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGATCTATTTCCTTTCCCCTCCATGTTGTTTTCAAAACAAACAA  150

seq1  AAAAAGAAAAAAACAAACAAACGAACAAAAAATCTCTCATTTAGTGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAAACAAACAAACGAACAAAAAATCTCTCATTTAGTGTTAG  200

seq1  GAGTTTGAAATGGTGGAAGAAAGAGGATGAGGGAACGTGGAAGAAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGAAATGGTGGAAGAAAGAGGATGAGGGAACGTGGAAGAAAAAAG  250

seq1  AACCCACAAAGTAGCTAACAAAAGGTACAGTGGATTCTTATCACACACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACAAAGTAGCTAACAAAAGGTACAGTGGATTCTTATCACACACCA  300

seq1  ATAGCCCCATCTCCTAATACTGCCCCATTAGAGGTGGCTTTGTGTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCCATCTCCTAATACTGCCCCATTAGAGGTGGCTTTGTGTGGAAA  350

seq1  GTTTCAAGGAGCATGAAACTTTGAAGCCACAGCTGTCCCACTGTAGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAGGAGCATGAAACTTTGAAGCCACAGCTGTCCCACTGTAGCTTC  400

seq1  TTATAAGCCTAACTACATTCCTACCTTTCAGCCACATCCTACAAGATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGCCTAACTACATTCCTACCTTTCAGCCACATCCTACAAGATCAT  450

seq1  TATTTTTCTTGACTGTTTTGGAAGTTGCCTTGGAAGGGTCAGATCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTTGACTGTTTTGGAAGTTGCCTTGGAAGGGTCAGATCTTTTT  500

seq1  CCATAGACAACATACTGTGCCAGAGAGAATCCATTGCTGGAGGTCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGACAACATACTGTGCCAGAGAGAATCCATTGCTGGAGGTCTGCTT  550

seq1  CTGTTCCTGGGTAAGATTTAGCACTATACATCCTCCTCCAGCTTTGCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTGGGTAAGATTTAGCACTATACATCCTCCTCCAGCTTTGCGAA  600

seq1  AGGAGCCATGATACTGATCTATACAAGTTGGTCAGCATACTCAGGAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCATGATACTGATCTATACAAGTTGGTCAGCATACTCAGGAAGCT  650

seq1  GAAGAAAACGACAAATGTCACCTGTATATTGTGGATATAGAGATGAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAACGACAAATGTCACCTGTATATTGTGGATATAGAGATGAGTTG  700

seq1  TTCCAGAATTC  711
      |||||||||||
seq2  TTCCAGAATTC  711

seq1: chr7_32429904_32430626
seq2: B6Ng01-095E13.g_66_788

seq1  GAATTCTCACCTGAGGAATACCAAATGGCAGAGAAGCACCTGAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCAAATGGCAGAGAAGCACCTGAAAAAAAT  50

seq1  GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACGCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACGCTGAGA  100

seq1  ACGGCTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGCGAAGATGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGCGAAGATGTGG  150

seq1  AGAAAGAGGTGCATTCCTCCGTTGTTGAGGTCTCCCTCGGACCCACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGGTGCATTCCTCCGTTGTTGAGGTCTCCCTCGGACCCACAAAT  200

seq1  AACTGAATCCCTCGGGAGGGGATACACCACAGGTTCTTTTATTATTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCCCTCGGGAGGGGATACACCACAGGTTCTTTTATTATTCAGA  250

seq1  CTTCTTTTTGCTATCCTAGGTTTTTTATTATTCCAGATGAATTTTCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTGCTATCCTAGGTTTTTTATTATTCCAGATGAATTTTCAAAT  300

seq1  TGCCCTTTCTAACTCAGTGAAGAATTGAGTTGCAATTTTGTTGGAGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTTCTAACTCAGTGAAGAATTGAGTTGCAATTTTGTTGGAGAGTG  350

seq1  CATTAAATGTGTAGATTGCTTTCGGCAGGATAGCCATTTTGAATATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATGTGTAGATTGCTTTCGGCAGGATAGCCATTTTGAATATTAAT  400

seq1  CCTTCCAATCCATGAGCATAGTAGATCTTTCCATCTTATGAGATCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAATCCATGAGCATAGTAGATCTTTCCATCTTATGAGATCTTCTT  450

seq1  CAATTTCTTTGTTTAGAAATTTGAACTTGTTATCATAGAGATCTTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTTTGTTTAGAAATTTGAACTTGTTATCATAGAGATCTTTCACT  500

seq1  TCCTTAGAGTCACACAAAAGTATTTTATATTATTTGTGACTATTGTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAGTCACACAAAAGTATTTTATATTATTTGTGACTATTGTGAGG  550

seq1  GGTGTTGTTTCTCTAATTTTTTTCTCAGTCGGTTTATCCTTTGTGTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTTTCTCTAATTTTTTTCTCAGTCGGTTTATCCTTTGTGTAGAG  600

seq1  AAAAGTCATTGATTTGTTTGAGGTAATATTATATCCAGCTACTTCACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCATTGATTTGTTTGAGGTAATATTATATCCAGCTACTTCACTGA  650

seq1  ATCTGTTTGTCAGGTTTAGAAGTTCTCTTGTAGAAATTTTAGGGTCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTGTCAGGTTTAGAAGTTCTCTTGTAGAAATTTTAGGGTCACAT  700

seq1  ACATAAACTATCATATCATCTGG  723
      |||||||||||||||||||||||
seq2  ACATAAACTATCATATCATCTGG  723