BAC Information

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BAC

Clone NameB6Ng01-095O16
Chromosome7 (Build37)
Map Location 6,335,386 - 6,497,191
singlet/doubletdoublet
Overlap geneZfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328
Upstream geneV1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78
Downstream geneOlfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095O16.bB6Ng01-095O16.g
ACCDH906724DH906725
length1,1241,100
definitionDH906724|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O16, 5' end.DH906725|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,496,466 - 6,497,191)(6,335,386 - 6,336,489)
sequence
gaattctgcttagcatcctacaatgcacagggcaacccccccctcactgc
agtgaacaattggatccccaaatgccatggtgcggaatcattggcttaat
gatttctaaccactctgaccaaaaccaacttatggaaaggaagggtttat
ttcacttacatgttcaggccacagttcattgttgatggaagtaagcaggg
actcaaggtaggaactgaaagacaggactggttgttatcccctgaggcat
tgcctctgaacagggaacccactcattgccagagaaatacaacagaagcc
atggaggaatgctacttgctggcttgatcatagactcaggcttcactagc
tttctagtacagcctagaactaactgttcatggaagggtgttacccacag
tgtgctggacctaactacaccaattaataatcaaacagtctcctcacagg
catgcccacacaccattctggtctggataacatctcaaccaagactcctt
tctcaggtgacttgaggctgtgtcaagctgacagtgaaaactaggacaac
aatccacttccatcttctggagcccacaatgcccaaggaggaataaggga
tctgggactcagtgggtaaagtgcctgctgcacaagcataaggatctgag
ttcgaatcttcaacactcaggtaaaagccacataccttgtagcttgtacc
tgtaactccaacactgggcagctggatctccagggcttgtggccaaccag
tctagttgaaacaggttcagtgagagacaccatctcaaaaactaatgtgg
aaagtgatagaggaagacacacaaatgtcatggctacacacacacataca
tacacactggtgcgcatacacgaatatgcatgtgtacatatacacatgta
caacaagagagagagacagagattgagaagatgaacaaaggagcttggag
tgacttggtcagtaaagtactcacatacaggcgtgaagatctgagctatc
tcccaacacttgtaagaagatgactacagcagtaatgacttgcatctcag
taatggaaatcagagggtggggaggattctgggtgcatgcttgctagtca
gccaagatgaaaccacggaattca
gaattctgagatccggctgtctcttactcccgggcactgcgattaaaggc
aagagtgaacatattaaagaggcaccgcagaagaaaacctggggaaacct
gcagacctaaaacttggtagtacatacagaggggcattttgaacactagg
cactaaagtcgaggtggtctagtggagaggtgaagattgcaatggcagca
actgaatcccaaactgaaaagtacatgcaaccagaaccactgtggacttg
ccaaaagcccgcattgccccagcccaattcacagcatcctccaactcccc
ttcctccaaacaacctcaaatcgcgcgccactagccctgccgctgcactc
gtacgctccaattgtcaccaggactcccagaagcctctgaggaactgttt
tgaatttcgcgggactcgtgtttccggcagggtcccgcggttctcccaca
gggtcttgtaaaaaccagctgggctctaaaggatttctccgctggggact
acacttcccagggggccttgtgctcaagcaaagtccacttccggtgcgtt
ccggaggaactgcctgagggtccgatcttttagggcggggttgggcaggg
cgagggcgtggctggcgagggcgtggcgggcgtgggtgttgccgggggtg
tgtccctgagcagcggccttgaagggtgtctgcagcctggctaggagagc
gtgcgcccctcgcgtgacatgcagggaatggcgagtgtagtgtcatgcga
accctgggccctcctggggcgtggcgccctctgcacaaaggccaggcctg
gtggaggtccggcggcggggactgtagttgctcctggggagcccgaccgg
ggaaggccgcgctccaggaacagcctggcctcccaggatcagcaaggagc
agtgacttcgggaccgcgcacaaaggtgagtgtcatgtttctgggctgag
tggacaagatgatctattctgggttgtgaaggaagggtaaggtccgattg
ttctcgagccttggtgctgaaatttgtgtctctgggccgcgttattgtgt
ttgttaataaccatcctcgaaagctcaacttgaggagagaagtctaggca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6496466_6497191
seq2: B6Ng01-095O16.b_451_1173 (reverse)

seq1  TGAATT-CGCTGATTCATCTAGACTGACTAGCAAGCATGCACCAGGAATC  49
      |||||| ||  | ||||||| | ||||||||||||||||||||  |||||
seq2  TGAATTCCGTGGTTTCATCTTGGCTGACTAGCAAGCATGCACCCAGAATC  50

seq1  CTCCC--ACCTCTGATTTCCCAATACTGAGATTGCAAGTCATTACTGCTG  97
      |||||   |||||||||| ||| |||||||| ||||||||||||||||||
seq2  CTCCCCACCCTCTGATTT-CCATTACTGAGA-TGCAAGTCATTACTGCTG  98

seq1  TAGTCATCTTCTTACAAGGTGTTGGGGAGATAGCTCAGATCTTCACGCCT  147
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  TAGTCATCTTCTTACAA-GTGTT-GGGAGATAGCTCAGATCTTCACGCCT  146

seq1  GTATGGTGAGTACTTTACTGACCAAGTCACTCCAAGCTCCTTTGTTCATC  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAT-GTGAGTACTTTACTGACCAAGTCACTCCAAGCTCCTTTGTTCATC  195

seq1  TTCTCAATCTCTGTCCTCTCTCTCTTGTTGTACATGTGTATATGTACACA  247
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCTCAATCTCTGT-CTCTCTCTCTTGTTGTACATGTGTATATGTACACA  244

seq1  TGCATATTCGTGTATGCGCACCAGTGTGTATGTATGTGTGTGTGTAGCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTCGTGTATGCGCACCAGTGTGTATGTATGTGTGTGTGTAGCCA  294

seq1  TGACATTTGTGTGTCTTCCTCTATCACTTTCCACATTAGTTTTTGAGATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTGTGTGTCTTCCTCTATCACTTTCCACATTAGTTTTTGAGATG  344

seq1  GTGTCTCTCACTGAACCTGTTTCAACTAGACTGGTTGGCCACAAGCCCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTCACTGAACCTGTTTCAACTAGACTGGTTGGCCACAAGCCCTG  394

seq1  GAGATCCAGCTGCCCAGTGTTGGAGTTACAGGTACAAGCTACAAGGTATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCAGCTGCCCAGTGTTGGAGTTACAGGTACAAGCTACAAGGTATG  444

seq1  TGGCTTTTACCTGAGTGTTGAAGATTCGAACTCAGATCCTTATGCTTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTACCTGAGTGTTGAAGATTCGAACTCAGATCCTTATGCTTGTG  494

seq1  CAGCAGGCACTTTACCCACTGAGTCCCAGATCCCTTATTCCTCCTTGGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCACTTTACCCACTGAGTCCCAGATCCCTTATTCCTCCTTGGGC  544

seq1  ATTGTGGGCTCCAGAAGATGGAAGTGGATTGTTGTCCTAGTTTTCACTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGCTCCAGAAGATGGAAGTGGATTGTTGTCCTAGTTTTCACTGT  594

seq1  CAGCTTGACACAGCCTCAAGTCACCTGAGAAAGGAGTCTTGGTTGAGATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGACACAGCCTCAAGTCACCTGAGAAAGGAGTCTTGGTTGAGATG  644

seq1  TTATCCAGACCAGAATGGTGTGTGGGCATGCCTGTGAGGAGACTGTTTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAGACCAGAATGGTGTGTGGGCATGCCTGTGAGGAGACTGTTTGA  694

seq1  TTATTAATTGGTGTAGTTAGGTCCAGCAC  726
      |||||||||||||||||||||||||||||
seq2  TTATTAATTGGTGTAGTTAGGTCCAGCAC  723

seq1: chr7_6335386_6336489
seq2: B6Ng01-095O16.g_69_1168

seq1  GAATTCTGAGATCCGGCTGTCTCTTACTCCCGGGCACTGCGATTAAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGATCCGGCTGTCTCTTACTCCCGGGCACTGCGATTAAAGGC  50

seq1  AAGAGTGAACATATTAAAGAGGCACCGCAGAAGAAAACCTGGGGAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGAACATATTAAAGAGGCACCGCAGAAGAAAACCTGGGGAAACCT  100

seq1  GCAGACCTAAAACTTGGTAGTACATACAGAGGGGCATTTTGAACACTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCTAAAACTTGGTAGTACATACAGAGGGGCATTTTGAACACTAGG  150

seq1  CACTAAAGTCGAGGTGGTCTAGTGGAGAGGTGAAGATTGCAATGGCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGTCGAGGTGGTCTAGTGGAGAGGTGAAGATTGCAATGGCAGCA  200

seq1  ACTGAATCCCAAACTGAAAAGTACATGCAACCAGAACCACTGTGGACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCCCAAACTGAAAAGTACATGCAACCAGAACCACTGTGGACTTG  250

seq1  CCAAAAGCCCGCATTGCCCCAGCCCAATTCACAGCATCCTCCAACTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGCCCGCATTGCCCCAGCCCAATTCACAGCATCCTCCAACTCCCC  300

seq1  TTCCTCCAAACAACCTCAAATCGCGCGCCACTAGCCCTGCCGCTGCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCAAACAACCTCAAATCGCGCGCCACTAGCCCTGCCGCTGCACTC  350

seq1  GTACGCTCCAATTGTCACCAGGACTCCCAGAAGCCTCTGAGGAACTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGCTCCAATTGTCACCAGGACTCCCAGAAGCCTCTGAGGAACTGTTT  400

seq1  TGAATTTCGCGGGACTCGTGTTTCCGGCAGGGTCCCGCGGTTCTCCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCGCGGGACTCGTGTTTCCGGCAGGGTCCCGCGGTTCTCCCACA  450

seq1  GGGTCTTGTAAAAACCAGCTGGGCTCTAAAGGATTTCTCCGCTGGGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTGTAAAAACCAGCTGGGCTCTAAAGGATTTCTCCGCTGGGGACT  500

seq1  ACACTTCCCAGGGGGCCTTGTGCTCAAGCAAAGTCCACTTCCGGTGCGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCCAGGGGGCCTTGTGCTCAAGCAAAGTCCACTTCCGGTGCGTT  550

seq1  CCGGAGGAACTGCCTGAGGGTCCGATCTTTTAGGGCGGGGTTGGGCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGAACTGCCTGAGGGTCCGATCTTTTAGGGCGGGGTTGGGCAGGG  600

seq1  CGAGGGCGTGGCTGGCGAGGGCGTGGCGGGCGTGGGTGTTGCCGGGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGGCGTGGCTGGCGAGGGCGTGGCGGGCGTGGGTGTTGCCGGGGGTG  650

seq1  TGTCCCTGAGCAGCGGCCTTGAAGGGTGTCTGCAGCCTGGCTAGGAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGAGCAGCGGCCTTGAAGGGTGTCTGCAGCCTGGCTAGGAGAGC  700

seq1  GTGCGCCCCTCGCGTGACATGCAGGGAATGGCGAGTGTAGTGTCATGCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCCCCTCGCGTGACATGCAGGGAATGGCGAGTGTAGTGTCATGCGA  750

seq1  ACCCTGGGCCCTCCTGGGGCGTGGCGCCCTCTGCACAAAGGCCAGGCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGGCCCTCCTGGGGCGTGGCGCCCTCTGCACAAAGGCCAGGCCTG  800

seq1  GTGGAGGTCCGGCGGCGGGGACTGTAGTTGCTCCTGGGAGCCCCGACCGG  850
      ||||||||||||||||||||||||||||||||||||||   |||||||||
seq2  GTGGAGGTCCGGCGGCGGGGACTGTAGTTGCTCCTGGGGAGCCCGACCGG  850

seq1  GGAAGGCCGCGCTCCAGGAACAGCCTGGCCTCCCAGGATCAGCAAGGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCCGCGCTCCAGGAACAGCCTGGCCTCCCAGGATCAGCAAGGAGC  900

seq1  AGTGACCTCGGGGACCGCGCACAAAGGTGAGTGTCATGTTTCTGGGCTGA  950
      |||||| || ||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTC-GGGACCGCGCACAAAGGTGAGTGTCATGTTTCTGGGCTGA  949

seq1  GTGGACAAAGATGAATCTATTCTGGG-TGTGAAGGAAGGGTAAGGTCCGA  999
      |||||| |||||| |||||||||||| |||||||||||||||||||||||
seq2  GTGGAC-AAGATG-ATCTATTCTGGGTTGTGAAGGAAGGGTAAGGTCCGA  997

seq1  TGGTTCTCGAGGCCTTGGTGCTGGAGATGGTGTCTCTGGG-CGCGTGATT  1048
      | |||||||| |||||||||||| |  | ||||||||||| ||||| |||
seq2  TTGTTCTCGA-GCCTTGGTGCTGAAATTTGTGTCTCTGGGCCGCGTTATT  1046

seq1  GTGATGGTTAAATAACCAATCCTCGAAAGCTCAACTTGAGGCAGAGAAGT  1098
      ||| | ||| ||||||| ||||||||||||||||||||||| ||||||||
seq2  GTGTTTGTT-AATAACC-ATCCTCGAAAGCTCAACTTGAGG-AGAGAAGT  1093

seq1  C-AGGCA  1104
      | |||||
seq2  CTAGGCA  1100