BAC Information

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BAC

Clone NameB6Ng01-096A09
Chromosome7 (Build37)
Map Location 124,305,686 - 124,306,886
singlet/doubletsinglet
Overlap genenone
Upstream genePlekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096A09.bB6Ng01-096A09.g
ACCDH906801DH906802
length1,180411
definitionDH906801|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A09, 5' end.DH906802|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttctttcaccattaataggtgggaccagtggatgctggggta
ttgatgttgcctagactgtagtgcatctcagttattttcctctcttgggt
aacttgctacagagaggtaatatgccattttcttagagagggcacaacat
tgaacaagtccagttcactcagttctcaagaatgtttctattagactaaa
gaagattcaggaggcttcaagcaggaaagagatttcaaggtgaccttgta
gaaggagccagcattatgaaatgtttttgatcaagtggaacaagataagc
cgttcatgttgtgaaagggttcaaagccctggacaccagaagaaataaaa
aaaaaaattcaatttctgccgtaagattgtgctttttacccctgtcgttt
aggagaatacatagatccactctcctcctgtaatgaaaatacagcattcc
ttggtggtaactcagacgcaaactgggttgcaaaggcaggtgagcgctgc
acagggaaggctgcctgtagatttttggaaacaggatctctatagttgtt
tggggacttatgagcaagctcagatataacgaggctgggaaccaaggaat
gacccagggctatttcaatatgcttccactttatcctaaggtgactgtag
aatcccctgaccgcagtgatctaaaacagtgctgtccttgcactgatggt
aacagcctatcactgcaccatcctagacagtggctactatccccaggtag
ctattaaatccttgaaatgtgggctactgcaacacagaaactattataaa
ttttagtgcacttaaaatagccaaagtggctacagtggcttcttctgcca
ttgtcactggatagcatggctctagatgggcttggattcagtctctacta
ctggctggtgctacaactttgggcagtgtcttattctccctggcttccct
ctccactctcctctggggaaaataggatagtgacatttacatgctaggtg
tctgtgaaatttgttgtaatagcagaacagcacagacaccgttggtttat
aaattgtggctatccagtcatgacacatctgcagcttcaagtcagttgca
gttttctcaacatgagcccagttctcataacactggggcaacttagtatg
aatgagaaaatcctctgtccttcagggaaa

caacaagtgcttactgacagaagcctgtatagctgtctccagaaaggctc
ttccagtgcctgacaaatacagaggtggatgctcacagccatccattgga
cagagcacaggatccccaatgaaggagctagagaaaagacccaaggagct
gaaggggttagcagccctataggagaaacaacaatatgaattaaccagta
ttcccagaactcccagggactaaatcatcaacaaaagagtacacatggtg
ggactcatggctccagctgcatatgtagcagaggatggcctagtcagtca
tcaatgggaggagaggtccttgatcctgtgaaggctctctgccccagtat
agggcaatgccaggaccagaaagcagatgtgggtgggttggtgagcaggg
ggagagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124305686_124306886
seq2: B6Ng01-096A09.b_46_1225 (reverse)

seq1  TTTCCCTGAAGGGTACAGAGGATTCTCCTCATTCCATAACTTTAGTCTGC  50
      ||||||||||||  |||||||||| | |||||| ||||   | ||| |||
seq2  TTTCCCTGAAGG--ACAGAGGATT-TTCTCATT-CATA--CTAAGT-TGC  43

seq1  CCCAGTGTTATTGAGAACCTGTGCTCATGGTTGAGAAAACTGCAAACTGA  100
      |||||||||| |||||| ||| |||||| |||||||||||||| ||||||
seq2  CCCAGTGTTA-TGAGAA-CTGGGCTCAT-GTTGAGAAAACTGC-AACTGA  89

seq1  CTCTGAAGCTGCAAGATGTGCTCATGACTTGATAGCCACAATTTAATAAA  150
      || ||||||||| ||||||| |||||||| |||||||||||||| |||||
seq2  CT-TGAAGCTGC-AGATGTG-TCATGACTGGATAGCCACAATTT-ATAAA  135

seq1  CCCACGTGTTCTGTGCTTGTTCTGCTATTACAACACATTTCCACAGACAT  200
      || |||   ||||||| |||||||||||||||||| |||| |||||||| 
seq2  CCAACGGTGTCTGTGC-TGTTCTGCTATTACAACAAATTT-CACAGACA-  182

seq1  CCTAGCATGTAGATGTCACTATCCTATTTTTCCCCAGAGGAGAGTTGGAG  250
      ||||||||||| |||||||||||||| ||||||||||||||||| |||||
seq2  CCTAGCATGTAAATGTCACTATCCTA-TTTTCCCCAGAGGAGAG-TGGAG  230

seq1  AGGGAAGCCAGGGAGAATAAGACACCTGCCCAAAGTTGTAGCACCAGCCA  300
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGGGAAGCCAGGGAGAATAAGACA-CTGCCCAAAGTTGTAGCACCAGCCA  279

seq1  GTAGTAGAGACTGAATCCAAGCCCATCTAGAGCCATGCTATCCAGTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGAGACTGAATCCAAGCCCATCTAGAGCCATGCTATCCAGTGACA  329

seq1  ATGGCAGAAGAAGCCACTGTAGCCACTTTGGCTATTTTAAGTGCACTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGAAGAAGCCACTGTAGCCACTTTGGCTATTTTAAGTGCACTAAA  379

seq1  ATTTATAATAGTTTCTGTGTTGCAGTAGCCCACATTTCAAGGATTTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATAGTTTCTGTGTTGCAGTAGCCCACATTTCAAGGATTTAATA  429

seq1  GCTACCTGGGGATAGTAGCCACTGTCTAGGATGGTGCAGTGATAGGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTGGGGATAGTAGCCACTGTCTAGGATGGTGCAGTGATAGGCTGT  479

seq1  TACCATCAGTGCAAGGACAGCACTGTTTTAGATCACTGCGGTCAGGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCAGTGCAAGGACAGCACTGTTTTAGATCACTGCGGTCAGGGGAT  529

seq1  TCTACAGTCACCTTAGGATAAAGTGGAAGCATATTGAAATAGCCCTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGTCACCTTAGGATAAAGTGGAAGCATATTGAAATAGCCCTGGGT  579

seq1  CATTCCTTGGTTCCCAGCCTCGTTATATCTGAGCTTGCTCATAAGTCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTGGTTCCCAGCCTCGTTATATCTGAGCTTGCTCATAAGTCCCC  629

seq1  AAACAACTATAGAGATCCTGTTTCCAAAAATCTACAGGCAGCCTTCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTATAGAGATCCTGTTTCCAAAAATCTACAGGCAGCCTTCCCTG  679

seq1  TGCAGCGCTCACCTGCCTTTGCAACCCAGTTTGCGTCTGAGTTACCACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCGCTCACCTGCCTTTGCAACCCAGTTTGCGTCTGAGTTACCACCA  729

seq1  AGGAATGCTGTATTTTCATTACAGGAGGAGAGTGGATCTATGTATTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCTGTATTTTCATTACAGGAGGAGAGTGGATCTATGTATTCTCC  779

seq1  TAAACGACAGGGGTAAAAAGCACAATCTTACGGCAGAAATTGAATTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGACAGGGGTAAAAAGCACAATCTTACGGCAGAAATTGAATTTTTT  829

seq1  TTTTTATTTCTTCTGGTGTCCAGGGCTTTGAACCCTTTCACAACATGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTCTTCTGGTGTCCAGGGCTTTGAACCCTTTCACAACATGAAC  879

seq1  GGCTTATCTTGTTCCACTTGATCAAAAACATTTCATAATGCTGGCTCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATCTTGTTCCACTTGATCAAAAACATTTCATAATGCTGGCTCCTT  929

seq1  CTACAAGGTCACCTTGAAATCTCTTTCCTGCTTGAAGCCTCCTGAATCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGGTCACCTTGAAATCTCTTTCCTGCTTGAAGCCTCCTGAATCTT  979

seq1  CTTTAGTCTAATAGAAACATTCTTGAGAACTGAGTGAACTGGACTTGTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTCTAATAGAAACATTCTTGAGAACTGAGTGAACTGGACTTGTTC  1029

seq1  AATGTTGTGCCCTCTCTAAGAAAATGGCATATTACCTCTCTGTAGCAAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTGCCCTCTCTAAGAAAATGGCATATTACCTCTCTGTAGCAAGT  1079

seq1  TACCCAAGAGAGGAAAATAACTGAGATGCACTACAGTCTAGGCAACATCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGAGAGGAAAATAACTGAGATGCACTACAGTCTAGGCAACATCA  1129

seq1  ATACCCCAGCATCCACTGGTCCCACCTATTAATGGTGAAAGAACTGAATT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCAGCATCCACTGGTCCCACCTATTAATGGTGAAAGAACTGAATT  1179

seq1  C  1201
      |
seq2  C  1180


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