BAC Information

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BAC

Clone NameB6Ng01-096G23
Chromosome7 (Build37)
Map Location 111,348,434 - 111,484,303
singlet/doubletdoublet
Overlap geneOlfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34
Upstream geneOlfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649
Downstream gene9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096G23.bB6Ng01-096G23.g
ACCDH907085DH907086
length1,0911,032
definitionDH907085|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G23, 5' end.DH907086|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,483,226 - 111,484,303)(111,348,434 - 111,349,471)
sequence
gaattcattatgtgtatgaggtaacacaggagacagaggtgataaggcca
cattgaaccacacacttgtgaaaggtgatcagaacacagtgatttcaaca
tctgcaacttcttaccccagtaggcccggacagctgatagctctgaaatg
ataaaacatttggagacttttattagaagcaaagattcgaaagaggtaat
actttgctctctctagaggtaagaaagggtggtataagaagaggtttatg
agaggcttaaaaaagtttaaaggtcctctctggtaaacaagaacacttta
gggtgctccctcggacacagctgtatcgtcctcctcacagaacacccctc
cctgacttccctgctatctttaccatagaaactgcctgctgctctcctca
cctctgaacttttgtagcatgccactcagatcaggagcttggaataccat
gctcagtttcttagaaactgcttttggcttcttcagtgtccagatctgac
tcctagggatggagaaatagtttaatctttacatctgtcatgttgttgtc
ttgctaacacaatggcctttctctccttccacatcactgatgtgcttcat
acctgaggatcctaaaggaaagccctgactgtgaatcagaagccacaggc
ctctgtgaaatgttccctgtgacactgggaggatctaaccctcttgaagt
cacagctgcctcttcttaatatgggggtagctttcatctcttgaaatctc
atggtaataatataaatttgggtgaaaagcatcggaatgacattggcaca
gcactgagggtgcggtgaggacctatgagttctcaaggaaattgagagca
aggctgtaggtcctgggctgtgatgtaggactcataaactaactgcctgt
gagtttgtgagtagtccgaagcctggggttccacaacacaccaccacacc
ccatgccccatatagataacagatggttcttctggggggaagaagaaagc
ctggactctaggtatggatccacatcggagaataaaatgttatgggggga
aagcctctctaaaagaaaaagtatattgcgttaaaaatgaa
gaattccctcaaaaatcacttgggaattcggaaggatgggaagaacccag
cagcaactggcaccaactggtcagtaggtggcgctaatggagcacccaga
gagtgctgtcaatgcccgtccaaagggggcggtgcacacctgagagggaa
cttctgcagacaggccctcctctataactaagcagtgactgatagagata
agagagtgaagagtgaaccactcccgcatataatgagaaatttgctttga
cttttgatcataaggaaaggaaaactcataccagaaaacataatgacact
aaaaataacagcagggactagcaatgcctatcagtcgatagcacacacaa
ggccccaagtgcaatccttagtacctcattaaccagggatgctgtcatac
ctctgtaatcgtccacttcaaaggtggaggcaggagaatagatcaaaaat
ttaagatcatcctcaactatatagatgacttccagccagcctgggctaca
tgaagcctgtttcaaaaaaaaaaaaaaattgtcaaatatttaaatgaaca
aaacaaccctccctattgtttgcttaaaacactgcattagttgttgtctg
gctaatacaataaaacaccaaaccaaagcaacttaaggaaagaagggttt
attctggctccagtatatggtggcagcaggtcacattgcatctacagtca
ggacacagagagatatgaactctggaactcagctcatcttcctttttatg
tctgatctgccagatatggtgggtcctctagcctcaatcttatctggcaa
gccctcacaaacaagcccaaagctttgtcctaagaccgtggcgcatacaa
tcagtacacaccatgtaagtgtaagggattcctcgggtctctgagaaagt
atggggaagagagcagtgaagtggagagttggtggcaggaggacagggtc
tccactcagtgagatgagagtattgacaggaaaggattcaagatcaatca
gtagagtgaagttagcatttatttggaatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111483226_111484303
seq2: B6Ng01-096G23.b_46_1136 (reverse)

seq1  TTCATTTT--AAGCAATA-AC-TTTTCTTTT-GCAAGGCTTT-CCCCCAT  44
      ||||||||  | |||||| || ||||||||| |  ||||||| |||||||
seq2  TTCATTTTTAACGCAATATACTTTTTCTTTTAGAGAGGCTTTCCCCCCAT  50

seq1  AACAATGTTATCTCTGATGTGGAT-CATACCTAGAGTTCAGGCTTTCTTC  93
      |||| | |  |||| ||||||||| |||||||||||| ||||||||||||
seq2  AACATTTTATTCTCCGATGTGGATCCATACCTAGAGTCCAGGCTTTCTTC  100

seq1  TT-CCCCCAGAAGAACCATCTGTTATCTATATGGGGCATGGGGTGTGGT-  141
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCCCCCCAGAAGAACCATCTGTTATCTATATGGGGCATGGGGTGTGGTG  150

seq1  GTGTG-TGTGGAA-CCCAGGCTTCGGACTACTCACAAACTCACAGGCAGT  189
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGTGGAACCCCAGGCTTCGGACTACTCACAAACTCACAGGCAGT  200

seq1  TAGTTTATGAGTCCTACATCACAG-CCAGGACCTACAGCCTTGCTCTCAA  238
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGTTTATGAGTCCTACATCACAGCCCAGGACCTACAGCCTTGCTCTCAA  250

seq1  TTTCCTTGAGAACTCATAGGTCCTCACCGCACCCTCAGTGCTGTGCCAAT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGAGAACTCATAGGTCCTCACCGCACCCTCAGTGCTGTGCCAAT  300

seq1  GTCATTCCGATGCTTTTCACCCAAATTTATATTATTACCATGAGATTTCA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCCGATGCTTTTCACCCAAATTTATATTATTACCATGAGATTTCA  350

seq1  AGAGATGAAAGCTA-CCCCATATTAAGAAGAGGCAGCTGTGACTTCAAGA  387
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAGATGAAAGCTACCCCCATATTAAGAAGAGGCAGCTGTGACTTCAAGA  400

seq1  GGGTTAGATCCTCCCAGTGTCACAGGGAACATTTCACAGAGGCCTGTGGC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGATCCTCCCAGTGTCACAGGGAACATTTCACAGAGGCCTGTGGC  450

seq1  TTCTGATTCACAGTCAGGGCTTTCCTTTAGGATCCTCAGGTATGAAGCAC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTCACAGTCAGGGCTTTCCTTTAGGATCCTCAGGTATGAAGCAC  500

seq1  ATCAGTGATGTGGAAGGAGAGAAAGGCCATTGTGTTAGCAAGACAACAAC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGATGTGGAAGGAGAGAAAGGCCATTGTGTTAGCAAGACAACAAC  550

seq1  ATGACAGATGTAAAGATTAAACTATTTCTCCATCCCTAGGAGTCAGATCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATGTAAAGATTAAACTATTTCTCCATCCCTAGGAGTCAGATCT  600

seq1  GGACACTGAAGAAGCCAAAAGCAGTTTCTAAGAAACTGAGCATGGTATTC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTGAAGAAGCCAAAAGCAGTTTCTAAGAAACTGAGCATGGTATTC  650

seq1  CAAGCTCCTGATCTGAGTGGCATGCTACAAAAGTTCAGAGGTGAGGAGAG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCCTGATCTGAGTGGCATGCTACAAAAGTTCAGAGGTGAGGAGAG  700

seq1  CAGCAGGCAGTTTCTATGGTAAAGATAGCAGGGAAGTCAGGGAGGGGTGT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCAGTTTCTATGGTAAAGATAGCAGGGAAGTCAGGGAGGGGTGT  750

seq1  TCTGTGAGGAGGACGATACAGCTGTGTCCGAGGGAGCACCCTAAAGTGTT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGGAGGACGATACAGCTGTGTCCGAGGGAGCACCCTAAAGTGTT  800

seq1  CTTGTTTACCAGAGAGGACCTTTAAACTTTTTTAAGCCTCTCATAAACCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTACCAGAGAGGACCTTTAAACTTTTTTAAGCCTCTCATAAACCT  850

seq1  CTTCTTATACCACCCTTTCTTACCTCTAGAGAGAGCAAAGTATTACCTCT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATACCACCCTTTCTTACCTCTAGAGAGAGCAAAGTATTACCTCT  900

seq1  TTCGAATCTTTGCTTCTAATAAAAGTCTCCAAATGTTTTATCATTTCAGA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAATCTTTGCTTCTAATAAAAGTCTCCAAATGTTTTATCATTTCAGA  950

seq1  GCTATCAGCTGTCCGGGCCTACTGGGGTAAGAAGTTGCAGATGTTGAAAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAGCTGTCCGGGCCTACTGGGGTAAGAAGTTGCAGATGTTGAAAT  1000

seq1  CACTGTGTTCTGATCACCTTTCACAAGTGTGTGGTTCAATGTGGCCTTAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTTCTGATCACCTTTCACAAGTGTGTGGTTCAATGTGGCCTTAT  1050

seq1  CACCTCTGTCTCCTGTGTTACCTCATACACATAATGAATTC  1078
      |||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTGTCTCCTGTGTTACCTCATACACATAATGAATTC  1091

seq1: chr7_111348434_111349471
seq2: B6Ng01-096G23.g_67_1098

seq1  GAATTCCCTCAAAAATCACTTGGGAATTCGGAAGGATGGGAAGAACCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCAAAAATCACTTGGGAATTCGGAAGGATGGGAAGAACCCAG  50

seq1  CAGCAACTGGCACCAACTGGTCAGTAGGTGGCGCTAATGGAGCACCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTGGCACCAACTGGTCAGTAGGTGGCGCTAATGGAGCACCCAGA  100

seq1  GAGTGCTGTCAATGCCCGTCCAAAGGGGGCGGTGCACACCTGAGAGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGTCAATGCCCGTCCAAAGGGGGCGGTGCACACCTGAGAGGGAA  150

seq1  CTTCTGCAGACAGGCCCTCCTCTATAACTAAGCAGTGACTGATAGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGACAGGCCCTCCTCTATAACTAAGCAGTGACTGATAGAGATA  200

seq1  AGAGAGTGAAGAGTGAACCACTCCCGCATATAATGAGAAATTTGCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGAAGAGTGAACCACTCCCGCATATAATGAGAAATTTGCTTTGA  250

seq1  CTTTTGATCATAAGGAAAGGAAAACTCATACCAGAAAACATAATGACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATCATAAGGAAAGGAAAACTCATACCAGAAAACATAATGACACT  300

seq1  AAAAATAACAGCAGGGACTAGCAATGCCTATCAGTCGATAGCACACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACAGCAGGGACTAGCAATGCCTATCAGTCGATAGCACACACAA  350

seq1  GGCCCCAAGTGCAATCCTTAGTACCTCATTAACCAGGGATGCTGTCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAAGTGCAATCCTTAGTACCTCATTAACCAGGGATGCTGTCATAC  400

seq1  CTCTGTAATCGTCCACTTCAAAGGTGGAGGCAGGAGAATAGATCAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAATCGTCCACTTCAAAGGTGGAGGCAGGAGAATAGATCAAAAAT  450

seq1  TTAAGATCATCCTCAACTATATAGATGACTTCCAGCCAGCCTGGGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCATCCTCAACTATATAGATGACTTCCAGCCAGCCTGGGCTACA  500

seq1  TGAAGCCTGTTTCAAAAAAAAAAAAAAATTGTCAAATATTTAAATGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTGTTTCAAAAAAAAAAAAAAATTGTCAAATATTTAAATGAACA  550

seq1  AAACAACCCTCCCTATTGTTTGCTTAAAACACTGCATTAGTTGTTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCCTCCCTATTGTTTGCTTAAAACACTGCATTAGTTGTTGTCTG  600

seq1  GCTAATACAATAAAACACCAAACCAAAGCAACTTAAGGAAAGAAGGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATACAATAAAACACCAAACCAAAGCAACTTAAGGAAAGAAGGGTTT  650

seq1  ATTCTGGCTCCAGTATATGGTGGCAGCAGGTCACATTGCATCTACAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCTCCAGTATATGGTGGCAGCAGGTCACATTGCATCTACAGTCA  700

seq1  GGACACAGAGAGATATGAACTCTGGAACTCAGCTCATCTTCCTTTTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGAGAGATATGAACTCTGGAACTCAGCTCATCTTCCTTTTTATG  750

seq1  TCTGATCTGCCAGATATGGTGGGTCCTCTAGCCTCAATCTTATCTGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTGCCAGATATGGTGGGTCCTCTAGCCTCAATCTTATCTGGCAA  800

seq1  GCCCTCACAAACAAGCCCAAAGCTTTGTCCTAAGACCGTGGCGCATACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCACAAACAAGCCCAAAGCTTTGTCCTAAGACCGTGGCGCATACAA  850

seq1  TCAGTACACACCATGTAAGTGTAAGGGATTCCTCGGGTCCCTGAGGAAAG  900
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  TCAGTACACACCATGTAAGTGTAAGGGATTCCTCGGGTCTCTGA-GAAAG  899

seq1  TATGGGGAAGAGAGCAGTGAAGTGGAGAGTTGGTGGCAGGAGGACAAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATGGGGAAGAGAGCAGTGAAGTGGAGAGTTGGTGGCAGGAGGAC-AGGG  948

seq1  TCTCCACTCAGGTGAAGATGAGAGTATTGACAGGAAAGGATTTCAGGATC  1000
      |||||||||| ||| ||||||||||||||||||||||||| |||| ||||
seq2  TCTCCACTCA-GTG-AGATGAGAGTATTGACAGGAAAGGA-TTCAAGATC  995

seq1  AATCAGTAGGAAGTGAAGTTAGCATTTATTTGG-ATGGT  1038
      |||||||||  |||||||||||||||||||||| |||||
seq2  AATCAGTAG--AGTGAAGTTAGCATTTATTTGGAATGGT  1032