BAC Information

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BAC

Clone NameB6Ng01-097C20
Chromosome7 (Build37)
Map Location 82,067,531 - 82,226,595
singlet/doubletdoublet
Overlap genenone
Upstream geneSt8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik
Downstream geneSv2b, 1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097C20.bB6Ng01-097C20.g
ACCDH907619DH907620
length1,1781,169
definitionDH907619|Mus musculus domesticus DNA, BAC clone: B6Ng01-097C20, 5' end.DH907620|Mus musculus domesticus DNA, BAC clone: B6Ng01-097C20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,225,420 - 82,226,595)(82,067,531 - 82,068,509)
sequence
gaattcattctagtcataaaataagatgatcacagaagtcatttagttta
gctcaacttactcattttgatgatggaataaaaaaaaaaaatgaatgaac
atggttaagaacacgtggctacagaatgccagtctccaggttttcagaat
tctctgaaaaattgctctttccattgcttcttgtcagtgcccactttatc
tcattgttctcgtttccataatagatataatgacatttatgttcctactt
aaaatagaacttgcctaagatgaaaagcacatcaattaaacagcattttt
gtagattaaaatgttgcagattattcaatgctattatcttcaccattgat
tttatcataacttctgtcctgtatattaaatatcctctgggtattggatt
ttaatgccaggaggaccattccttccacaacctcattttggatgaggaca
ccaaggtcaagggagacctgtgtgacttgcagaaggtcacaggtaatcaa
acaagtcctcctgcatcgtgattccctgaggattcacatctcagggagtg
gctcccttgaaatgcttctctgaaatgtggctgaggctgctgtctacttc
ccatgtaatttcccctctggtatttgacaccacaaacggaagcacaaggc
cagatgcttaatagctcctaaatggagctgatgaatgataaaatgacctt
tccccatctctttctgtgggtcactgtgtctcctccaaagtcattgattt
tttgttgtgttattcccttatttccacactggggaattacataaatgata
tggaaacagcagactacttatgggaagctggaatataacaggtctagatt
tttttttcaggaattggcagctaaatgatgataattggtatacttctagc
agaacagaaaactatataatataaagggaaagttattcttgggtcatatt
atccgtcttctttaaatggtagaatttatttctctcatatcatatacaat
gttttatcattgcagaaaaatttaaaactatttctcattttctttcttta
ccgaatggaaatatccaggttctatttggggtatttttctacctcaacgg
taaggccagcctattgtctcagggagctctgggtatttgggggtggagaa
cagggttagaacaagattggccttaagt
gaattctggggacaagtgagagggtataaaaatgccagagccctgagagg
ctgtggtgatgactgctccccctgctgttgctgatgttgctgtttgctga
ttgtttgctgtttgctgtttgctgtttgctgtttactgtttactatttac
tgtttactggttgctgtttgttggttactggctgctggttactggtgact
ggttgaagatatcttgacaatgaagataaaacttaccccaagaaacttga
tgtccctaatcagccagaagtagtccaacaagatcaatgccaccttttcc
ctctatcctttttcacctacatagtattcgggggttataagagtggagaa
agatggtagaaaaaagaaccccataaagtagccaaaagtatagttacagt
tttttctcagtccacaagtttagatgtcttaacagtccaaccaagcactg
aaagtctgagggttgattcttagagagctgcttatttccagcctaagaag
ttggttatataaattaagggcagaatgtcatggttacaggacagatagac
ttgccagcaagagtgagggcaagcatgcaaaaaggcaaagtttccttctt
ccatgtccttttatctggactgccaccagaaggtacctaaatttagagtg
aatctttattcaaataatttgatcaaaacatttcatcaccagactgcatt
caaataatcttatcaagaaaatcccttaaggatgttgccagttaaagtgg
gagcactaattggaaaagagcaccatcctctcactggggaaggaagtgta
gaggagaaccctaatgaggccgagggactttgagccctcagattctgaag
gaattatcttacctgagtaagtagtgtctacatcctcaccagaggatgca
tccctaaccccacttcttacaggattacccacccccactcttgcctgaga
agaattaatccccaatatctgtagaactggcagtgaccttccctaaagaa
tatgtcagacaagacaatatggatgaccttcgtgcccactgataggtaca
tctagccctatataaacaagaccttaagcaaaagaacagcccttagaatg
tgcttgctaacctgacaaaatatgaaactgaacaatatggttcctggggt
ataccgaaatagtgacacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82225420_82226595
seq2: B6Ng01-097C20.b_44_1221 (reverse)

seq1  ACTTAAAGGCCAAATCTTGGTTTCTAAACCTGTTCTCCA-CTCCAAATAA  49
      |||| |||||| |||||||  |||||| ||||||||||| | ||||||| 
seq2  ACTT-AAGGCC-AATCTTG--TTCTAACCCTGTTCTCCACCCCCAAATAC  46

seq1  CCAGAGCTCCTTGGAGAC-ATA-GCTGACTTTACGGTTGAGGTAGAAAAA  97
      |||||||||| | ||||| ||| |||| | |||| |||||||||||||||
seq2  CCAGAGCTCCCT-GAGACAATAGGCTGGCCTTACCGTTGAGGTAGAAAAA  95

seq1  TACACAAAAT-GAACCTGGA-ATATTCATTCGGTAAAGATAG-AAATGAG  144
      ||| | |||| ||||||||| || | ||||||||||||| || |||||||
seq2  TACCCCAAATAGAACCTGGATATTTCCATTCGGTAAAGAAAGAAAATGAG  145

seq1  AAATAGTTTTAAATTTTTTCTGCAATGATAAAACATTGTATATGATATGA  194
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTTTAAA-TTTTTCTGCAATGATAAAACATTGTATATGATATGA  194

seq1  GAGAAATAAATTCTACCATTTAAAGAAAGAACGGATAATATGA-CCAAGA  243
      |||||||||||||||||||||||||||   ||||||||||||| ||||||
seq2  GAGAAATAAATTCTACCATTTAAAGAA--GACGGATAATATGACCCAAGA  242

seq1  ATAACTTTCCCTTTATATTTTATAGTTTTCTGTTCTGCTAGAAGTATACC  293
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATAACTTTCCCTTTATATTATATAGTTTTCTGTTCTGCTAGAAGTATACC  292

seq1  AATTATCATCATTTAGCTGCCAATTCCTGAAAAAAAAATCTAGACCTGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCATCATTTAGCTGCCAATTCCTGAAAAAAAAATCTAGACCTGTT  342

seq1  ATATTCCAGCTTCCCATAAGTAGTCTGCTGTTTCCATATCATTTATGTAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAGCTTCCCATAAGTAGTCTGCTGTTTCCATATCATTTATGTAA  392

seq1  TT-CCCAGTGTGGAAATAAGGGAATAACACAAC-AAAAATCAATGACTTT  441
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCCCCAGTGTGGAAATAAGGGAATAACACAACAAAAAATCAATGACTTT  442

seq1  GGAGGAGACACAGTGACCCACAG-AAGAGATGGGGAAAGGTCATTTTATC  490
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGAGGAGACACAGTGACCCACAGAAAGAGATGGGGAAAGGTCATTTTATC  492

seq1  ATTCATCAGCTCCATTTAGGAGCTATTAAGCATCTGGCCTTGTGCTTCCG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAGCTCCATTTAGGAGCTATTAAGCATCTGGCCTTGTGCTTCCG  542

seq1  TTTGTGGTGTCAAATACCAGAGGGGAAATTACATGGGAAGTAGACAGCAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTGTCAAATACCAGAGGGGAAATTACATGGGAAGTAGACAGCAG  592

seq1  CCTCAGCCACATTTCAGAGAAGCATTTCAAGGGAGCCACTCCCTGAGATG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCACATTTCAGAGAAGCATTTCAAGGGAGCCACTCCCTGAGATG  642

seq1  TGAATCCTCAGGGAATCACGATGCAGGAGGACTTGTTTGATTACCTGTGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTCAGGGAATCACGATGCAGGAGGACTTGTTTGATTACCTGTGA  692

seq1  CCTTCTGCAAGTCACACAGGTCTCCCTTGACCTTGGTGTCCTCATCCAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCAAGTCACACAGGTCTCCCTTGACCTTGGTGTCCTCATCCAAA  742

seq1  ATGAGGTTGTGGAAGGAATGGTCCTCCTGGCATTAAAATCCAATACCCAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTTGTGGAAGGAATGGTCCTCCTGGCATTAAAATCCAATACCCAG  792

seq1  AGGATATTTAATATACAGGACAGAAGTTATGATAAAATCAATGGTGAAGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATTTAATATACAGGACAGAAGTTATGATAAAATCAATGGTGAAGA  842

seq1  TAATAGCATTGAATAATCTGCAACATTTTAATCTACAAAAATGCTGTTTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCATTGAATAATCTGCAACATTTTAATCTACAAAAATGCTGTTTA  892

seq1  ATTGATGTGCTTTTCATCTTAGGCAAGTTCTATTTTAAGTAGGAACATAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTGCTTTTCATCTTAGGCAAGTTCTATTTTAAGTAGGAACATAA  942

seq1  ATGTCATTATATCTATTATGGAAACGAGAACAATGAGATAAAGTGGGCAC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTATATCTATTATGGAAACGAGAACAATGAGATAAAGTGGGCAC  992

seq1  TGACAAGAAGCAATGGAAAGAGCAATTTTTCAGAGAATTCTGAAAACCTG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAAGCAATGGAAAGAGCAATTTTTCAGAGAATTCTGAAAACCTG  1042

seq1  GAGACTGGCATTCTGTAGCCACGTGTTCTTAACCATGTTCATTCATTTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGCATTCTGTAGCCACGTGTTCTTAACCATGTTCATTCATTTTT  1092

seq1  TTTTTTTATTCCATCATCAAAATGAGTAAGTTGAGCTAAACTAAATGACT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTCCATCATCAAAATGAGTAAGTTGAGCTAAACTAAATGACT  1142

seq1  TCTGTGATCATCTTATTTTATGACTAGAATGAATTC  1176
      ||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATCATCTTATTTTATGACTAGAATGAATTC  1178

seq1: chr7_82067531_82068509
seq2: B6Ng01-097C20.g_261_1236

seq1  GGTGACTGGTTGAAGATATCTTGACAATGAAGATAAAACTTACCCCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTGGTTGAAGATATCTTGACAATGAAGATAAAACTTACCCCAAGA  50

seq1  AACTTGATGTCCCTAATCAGCCAGAAGTAGTCCAACAAGATCAATGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGATGTCCCTAATCAGCCAGAAGTAGTCCAACAAGATCAATGCCAC  100

seq1  CTTTTCCCTCTATCCTTTTTCACCTACATAGTATTCGGGGGTTATAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCTCTATCCTTTTTCACCTACATAGTATTCGGGGGTTATAAGAG  150

seq1  TGGAGAAAGATGGTAGAAAAAAGAACCCCATAAAGTAGCCAAAAGTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGATGGTAGAAAAAAGAACCCCATAAAGTAGCCAAAAGTATAG  200

seq1  TTACAGTTTTTTCTCAGTCCACAAGTTTAGATGTCTTAACAGTCCAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTTTTTCTCAGTCCACAAGTTTAGATGTCTTAACAGTCCAACCA  250

seq1  AGCACTGAAAGTCTGAGGGTTGATTCTTAGAGAGCTGCTTATTTCCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAAAGTCTGAGGGTTGATTCTTAGAGAGCTGCTTATTTCCAGCC  300

seq1  TAAGAAGTTGGTTATATAAATTAAGGGCAGAATGTCATGGTTACAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTTGGTTATATAAATTAAGGGCAGAATGTCATGGTTACAGGACA  350

seq1  GATAGACTTGCCAGCAAGAGTGAGGGCAAGCATGCAAAAAGGCAAAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACTTGCCAGCAAGAGTGAGGGCAAGCATGCAAAAAGGCAAAGTTT  400

seq1  CCTTCTTCCATGTCCTTTTATCTGGACTGCCACCAGAAGGTACCTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCCATGTCCTTTTATCTGGACTGCCACCAGAAGGTACCTAAATT  450

seq1  TAGAGTGAATCTTTATTCAAATAATTTGATCAAAACATTTCATCACCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGAATCTTTATTCAAATAATTTGATCAAAACATTTCATCACCAGA  500

seq1  CTGCATTCAAATAATCTTATCAAGAAAATCCCTTAAGGATGTTGCCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCAAATAATCTTATCAAGAAAATCCCTTAAGGATGTTGCCAGTT  550

seq1  AAAGTGGGAGCACTAATTGGAAAAGAGCACCATCCTCTCACTGGGGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGAGCACTAATTGGAAAAGAGCACCATCCTCTCACTGGGGAAGG  600

seq1  AAGTGTAGAGGAGAACCCTAATGAGGCCGA-GGACTTTGAGCCCTCAGAT  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGTGTAGAGGAGAACCCTAATGAGGCCGAGGGACTTTGAGCCCTCAGAT  650

seq1  TCTGAAGGAATTATCTTACCTGAGTAAGTAGTGTCTACATCCTCACCAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGAATTATCTTACCTGAGTAAGTAGTGTCTACATCCTCACCAGA  700

seq1  GGATGCATCCCTAACCCCACTTCTTACAGGATTACCCA-CCCCACTCTTG  748
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGATGCATCCCTAACCCCACTTCTTACAGGATTACCCACCCCCACTCTTG  750

seq1  CCTGAG-AGAATTAATTCCCCATTATCTGTAGAACTGGCAGTGACCTTCC  797
      |||||| |||||||| |||||| |||||||||||||||||||||||||||
seq2  CCTGAGAAGAATTAA-TCCCCAATATCTGTAGAACTGGCAGTGACCTTCC  799

seq1  CTAAAGGATATGTCAGACAAGACAATATGGATGACCTTCGGTGCACACTG  847
      |||||| |||||||||||||||||||||||||||||||| |||| |||||
seq2  CTAAAGAATATGTCAGACAAGACAATATGGATGACCTTC-GTGCCCACTG  848

seq1  ATAGGTTACATCTAGCCCTATAT-AACAAGACTCAAAGCCAAAAAGGACA  896
      ||||| ||||||||||||||||| ||||||||   ||||  ||||| |||
seq2  ATAGG-TACATCTAGCCCTATATAAACAAGACCTTAAGC--AAAAGAACA  895

seq1  GCCTTTAGAGT-TGC-TGCT-ACCAGACAAAATAGTGAACTGAAACAATA  943
      ||| ||||| | ||| |||| ||| |||||||||   ||||| |||||||
seq2  GCCCTTAGAATGTGCTTGCTAACCTGACAAAATATGAAACTG-AACAATA  944

seq1  TAGTGTTCCTGGGTGATAACAGAAATTAGTGACACC  979
      |   |||||||||  || || |||| ||||||||||
seq2  T--GGTTCCTGGGGTAT-ACCGAAA-TAGTGACACC  976