BAC Information

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BAC

Clone NameB6Ng01-097E09
Chromosome7 (Build37)
Map Location 149,728,692 - 149,857,443
singlet/doubletdoublet
Overlap geneNctc1, H19, Igf2, Igf2as
Upstream geneAp2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23
Downstream geneIns2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097E09.bB6Ng01-097E09.g
ACCDH907692DH907693
length1,083738
definitionDH907692|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E09, 5' end.DH907693|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,856,364 - 149,857,443)(149,728,692 - 149,729,428)
sequence
gaattcaagggaatagagcttggatacatttaagaaaaataaagtttttc
ttctctggctgtgacctctaggatatagccattatttctttatagcccct
tatccttctaccagctcagaggaagcgcctctcttggagctttcatggaa
tctcttcacaggtttggagaaatccttcactttcttcatgtcaacctctg
gcttagtaaatcacagccaaacattctcagagagccttagtggtagcagt
ttgcaatgtcaagcatgttgctgtggacaatagagggcagcacttgtcac
atacttctagtctcagggcctagagtaggtctagaatcttcacaagaaaa
agactgcctcactctgataagcatgaaatgccctctgttataaatctcat
atatgatttggggtcatccacaagcatagtgagaaatcccacttgccctt
ctcccatggaataggatatctgtatcatacctccatcaagtatagattac
cataaagtttatcttcccctacagaaagtctcattctccctaaacatgcc
tatctcaaccactaagtaagtgacttcaggtggaacttggacaacaaatg
gagagggaataattaagtcttagcttgggcttataagctgagtaaaataa
aaaagattagctggaatgcaaaagtgcaaagggtagagactagtgggttt
tttgtggagtgcttttttttttctttctttctttctttctttctttcttt
tttttttttttttttttttttttttttttttctgggctttactctctgtt
ttccctcaaagccaggaacaaaggtctcagagtttaaattgtgacttcag
gcattacttttttatctgagccccatttcagcagcttgtctttaaagaag
gacattttgagtccgttccttatacagcgttttgagtatcgtgcctttaa
aagcactggcaactcggctaaaaggggtgggaacccatccaataacattc
cccaaaggggtgaccagtgtcacttatactggcattcggccccgtatgct
tatggttgggcaccctctaaaggggcagggggc
gaattcttgctctgcgacatagctctgctgtgggctgtgggttctgagca
gggcctggggccccctgagatggagtcagtgctctcagccccacccccac
tggagtgcacgggcgggcgggcgagcaggccggtgggcgggagaaggggg
gtatgctggctgaggctgaaggccagcaaaagcacccttcaagtgttgat
ttagaggatgggaaggtcaggaagtgggcaggagaactgtattttcctta
gagaaataattcatggggccccccgggcatggacgaccctcactgttggg
ggaggaggaatcccatctttcacgctgcctgcacaaggaactctttgcaa
cctccacaggggcacaggcagacttgggggccaaggtcacccttcatcat
gtcctgctggcttccacagtccccccccagctttggccttgtcacacata
cagacacacacacagacacacacacacataccccaccagggccctcacag
gcccaggctacatcccgctcttttagccaggggaggaggaagggggcctc
tagctgctggtgactgcttcctgatacccaggaggctacctggataggga
agctaggaggatcccgggtgcagtagtcacttcagtgtagaaccaagtca
cctacaataaggcagcctagcgggcagatgaccataaacatggaaacagg
gtcagtttgcctctttgttactagacccctttgtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149856364_149857443
seq2: B6Ng01-097E09.b_47_1129 (reverse)

seq1  GCCCCCTGCCCTTTATGAGTGGTGCCAAACACTAAGCATACTGGTGCAGA  50
      ||||||||||| ||  ||| |||||| |||  ||||||||| || || ||
seq2  GCCCCCTGCCCCTTTAGAG-GGTGCCCAACCATAAGCATAC-GGGGCCGA  48

seq1  TGGCATGTAT-AGTGACACTTGTTCACCCTTTTGGGG-ATGTTATTTGGG  98
        ||  |||| |||||||| || |||||| ||||||| |||||| |||| 
seq2  ATGCCAGTATAAGTGACAC-TGGTCACCCCTTTGGGGAATGTTA-TTGGA  96

seq1  TGGGTTCTCACCCCTTTTTAGCCGAGTTG-CAGTGCTGTTTAAGGCACG-  146
      ||||||| |||||| |||||||||||||| ||||||| || |||||||| 
seq2  TGGGTTCCCACCCC-TTTTAGCCGAGTTGCCAGTGCTTTTAAAGGCACGA  145

seq1  TACTC-AAACGCTGTTTAAGGAACGGACTC-AAATGTCCTTCTTAAAGGA  194
      ||||| ||||||||| |||||||||||||| ||||||||||||| || ||
seq2  TACTCAAAACGCTGTATAAGGAACGGACTCAAAATGTCCTTCTTTAAAGA  195

seq1  C-AGCTGCTGAGATGGGGCTCAGAT-AACAAGTATTGCCTGAAGTCAC-A  241
      | ||||||||| ||||||||||||| || ||||| ||||||||||||| |
seq2  CAAGCTGCTGAAATGGGGCTCAGATAAAAAAGTAATGCCTGAAGTCACAA  245

seq1  TTTAAACTCTGAGACCTTTGTTCCTGGCTTTGAGGGAAAACAGAGAGTAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCTGAGACCTTTGTTCCTGGCTTTGAGGGAAAACAGAGAGTAA  295

seq1  AGACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAA  341
      || | ||  |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAG--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAA  343

seq1  AGAAAGAAAGAAAGAAAGAAAAAAAAAAGCACTCCAC-AAAAACCCACTA  390
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAAAAAAAAGCACTCCACAAAAAACCCACTA  393

seq1  GTCTCTACCCTTTGCACTTTTGCATTCCAGCTAATCTTTTTTATTTTACT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTACCCTTTGCACTTTTGCATTCCAGCTAATCTTTTTTATTTTACT  443

seq1  CAGCTTATAAGCCCAAGCTAAGACTTAATTATTCCCTCTCCATTTGTTGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTATAAGCCCAAGCTAAGACTTAATTATTCCCTCTCCATTTGTTGT  493

seq1  CCAAGTTCCACCTGAAGTCACTTACTTAGTGGTTGAGATAGGCATGTTTA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTCCACCTGAAGTCACTTACTTAGTGGTTGAGATAGGCATGTTTA  543

seq1  GGGAGAATGAGACTTTCTGTAGGGGAAGATAAACTTTATGGTAATCTATA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATGAGACTTTCTGTAGGGGAAGATAAACTTTATGGTAATCTATA  593

seq1  CTTGATGGAGGTATGATACAGATATCCTATTCCATGGGAGAAGGGCAAGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGGAGGTATGATACAGATATCCTATTCCATGGGAGAAGGGCAAGT  643

seq1  GGGATTTCTCACTATGCTTGTGGATGACCCCAAATCATATATGAGATTTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTCTCACTATGCTTGTGGATGACCCCAAATCATATATGAGATTTA  693

seq1  TAACAGAGGGCATTTCATGCTTATCAGAGTGAGGCAGTCTTTTTCTTGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAGGGCATTTCATGCTTATCAGAGTGAGGCAGTCTTTTTCTTGTG  743

seq1  AAGATTCTAGACCTACTCTAGGCCCTGAGACTAGAAGTATGTGACAAGTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTAGACCTACTCTAGGCCCTGAGACTAGAAGTATGTGACAAGTG  793

seq1  CTGCCCTCTATTGTCCACAGCAACATGCTTGACATTGCAAACTGCTACCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCTATTGTCCACAGCAACATGCTTGACATTGCAAACTGCTACCA  843

seq1  CTAAGGCTCTCTGAGAATGTTTGGCTGTGATTTACTAAGCCAGAGGTTGA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCTCTCTGAGAATGTTTGGCTGTGATTTACTAAGCCAGAGGTTGA  893

seq1  CATGAAGAAAGTGAAGGATTTCTCCAAACCTGTGAAGAGATTCCATGAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGAAAGTGAAGGATTTCTCCAAACCTGTGAAGAGATTCCATGAAA  943

seq1  GCTCCAAGAGAGGCGCTTCCTCTGAGCTGGTAGAAGGATAAGGGGCTATA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAGAGAGGCGCTTCCTCTGAGCTGGTAGAAGGATAAGGGGCTATA  993

seq1  AAGAAATAATGGCTATATCCTAGAGGTCACAGCCAGAGAAGAAAAACTTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAATGGCTATATCCTAGAGGTCACAGCCAGAGAAGAAAAACTTT  1043

seq1  ATTTTTCTTAAATGTATCCAAGCTCTATTCCCTTGAATTC  1080
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTAAATGTATCCAAGCTCTATTCCCTTGAATTC  1083

seq1: chr7_149728692_149729428
seq2: B6Ng01-097E09.g_71_808

seq1  GAATTCTTGCTCTGCGACATAGCTCTGCTGTGGGCTGTGGGTTCTGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTCTGCGACATAGCTCTGCTGTGGGCTGTGGGTTCTGAGCA  50

seq1  GGGCCTGGGGCCCCCTGAGATGGAGTCAGTGCTCTCAGCCCCACCCCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGGGCCCCCTGAGATGGAGTCAGTGCTCTCAGCCCCACCCCCAC  100

seq1  TGGAGTGCACGGGCGGGCGGGCGAGCAGGCCGGTGGGCGGGAGAAGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGCACGGGCGGGCGGGCGAGCAGGCCGGTGGGCGGGAGAAGGGGG  150

seq1  GTATGCTGGCTGAGGCTGAAGGCCAGCAAAAGCACCCTTCAAGTGTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTGGCTGAGGCTGAAGGCCAGCAAAAGCACCCTTCAAGTGTTGAT  200

seq1  TTAGAGGATGGGAAGGTCAGGAAGTGGGCAGGAGAACTGTATTTTCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGATGGGAAGGTCAGGAAGTGGGCAGGAGAACTGTATTTTCCTTA  250

seq1  GAGAAATAATTCATGGGGCCCCCCGGGCATGGACGACCCTCACTGTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATAATTCATGGGGCCCCCCGGGCATGGACGACCCTCACTGTTGGG  300

seq1  GGAGGAGGAATCCCATCTTTCACGCTGCCTGCACAAGGAACTCTTTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGAATCCCATCTTTCACGCTGCCTGCACAAGGAACTCTTTGCAA  350

seq1  CCTCCACAGGGGCACAGGCAGACTTGGGGGCCAAGGTCACCCTTCATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAGGGGCACAGGCAGACTTGGGGGCCAAGGTCACCCTTCATCAT  400

seq1  GTCCTGCTGGCTTCCACAGTCCCCCCCCAGCTTTGGCCTTGTCACACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCTGGCTTCCACAGTCCCCCCCCAGCTTTGGCCTTGTCACACATA  450

seq1  CAGACACACACACAGACACACACACACATACCCCACCAGGGCCCTCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACACACAGACACACACACACATACCCCACCAGGGCCCTCACAG  500

seq1  GCCCAGGCTACATCCCGCTCTTTTAGCCAGGGGAGGAGGAA-GGGGCCTC  549
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCCCAGGCTACATCCCGCTCTTTTAGCCAGGGGAGGAGGAAGGGGGCCTC  550

seq1  TAGCTGCTGGTGACTGCTTCCTGATACCCAGGAGGCTACCTGGATAGGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTGGTGACTGCTTCCTGATACCCAGGAGGCTACCTGGATAGGGA  600

seq1  AGCTAGGAGGATCCCGGGTGCAGTAGTCACTTCAGTGTAGAACCAAGTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGAGGATCCCGGGTGCAGTAGTCACTTCAGTGTAGAACCAAGTCA  650

seq1  CCTACAATAAGGCAGCCTAGGCGGGCAGATGACCATAGACATGGAAACAG  699
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  CCTACAATAAGGCAGCCTA-GCGGGCAGATGACCATAAACATGGAAACAG  699

seq1  GGTCAG-TTGCCTCCTTGTTACCAGACCCCTTTGTGTAT  737
      |||||| ||||||| ||||||| ||||||||||||||||
seq2  GGTCAGTTTGCCTCTTTGTTACTAGACCCCTTTGTGTAT  738