BAC Information

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BAC

Clone NameB6Ng01-097E18
Chromosome7 (Build37)
Map Location 124,484,427 - 124,635,928
singlet/doubletdoublet
Overlap geneXylt1
Upstream genePik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097E18.bB6Ng01-097E18.g
ACCDH907710DH907711
length1,100841
definitionDH907710|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E18, 5' end.DH907711|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,634,830 - 124,635,928)(124,484,427 - 124,485,264)
sequence
gaattctccaaggaggccttttttttttttttttgtactaacaatccatt
gatgatacctacaaagacagtccctaagagacatatgccttttagcaagg
caaaacaaaaccacaaaaagcaaacaaataaacaaaacaaaacaaaacaa
atacccctatctgctggctgatataggtgcagacattattaagcctattt
tgcttataaaaaatctgactcagaaaaagaaacaaaattctttcttgata
cgttacggggtgtagaaggaggggccagcaagtaagagacccaccttctc
catgttaaatcagccgtctgagctgggcagtggtaacacatgcctttaat
cccagcacttgggaggcagaggcaggtggatttctgggttcgaggccagc
ctggtctacaaagtgagttcagagttccaggacagccagggctacacaga
gaaaccctgtctcgaaaccgaaaaaaaaaatcagccgtctgctcttcttc
ctgatcttctgtgcggcgggagaattctttcattttctagtgctctctag
tcagcccactggtatttctactttggtgaatttatttaaaaaagaaacat
tacccatatattggaaggaaaactagtctaatttgccacaaatgagatgt
aagtaggaaaatacacactgagctattaatgtctttaaagtttgctcctg
ctgttcgtaaactcgtcttgtgagtcaccagcttcctcccaacacaccgt
gaaaggctgctgaggagaaggggagtcttgagcttgttctggatggaagg
ggcaggaaccaaaggactagaagaagcatccagggtgggtgcctggtcta
cgggaaaatggtggaggtgagccaattgttggataccgctgcaactctag
tttttttgctgagacctaacttgctgggctgtggagttatgattcttttc
aaagcaaggacagaaatggtagtgtttgagtcacctccagaagccaggtg
tcaggcactaacaacacctcccagaagtgtccagcactgtgctaagactg
cttttcagcaggaagagtaaaaacaatctaaattctaagataatctacat

gaattctccttaagagggacggggtttcgttttctctcgctcttgcttct
tgcactcttgctcctgaagatgtaagcaataaagctttgccgcagaagat
tctggtctgttgcgtctttcctggccggtcgtgagaacgcgtctaataac
aaaacctggccatccagccagcttccattcactttccctctcatttactg
ttcagttctaggaagctcctgggcagtgagaaagagagaaggatgtcagc
tggtggaggaaattccctttcaactccctggagtctctgatcacttgaaa
gtaaaaggcattcctcagcttccctggtaaaggtggccctggggcagcct
tgctgggtgagctgtcctagttgcaatttctataacttcctgttacttta
ccttttcaaagccgactttcaatgatggttcttaaacactttaaccttcc
ttctagcccaccacccaccagagatagtggaagagaaaggatacggggtg
ggggtggggcctttttagaaatggttctttggagtaaattctatctgcat
agccaggatttcagcagttcagttcacaggtcagcagggcccaggaccaa
caggaacaccaggaaaagttctcagctgtgcctctcaatgaagcgaagat
cataagatcagagaagacttgagaccgagaagtgttgcacagctagctct
tcctagccagccccttttcacagtctgttgagtcctatttatactcccct
taaacatcagtcttacctcacccatgtgtattgcctcatcatgtgagttt
gtctcagctgacatcactctgccggtcaacccgagcctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124634830_124635928
seq2: B6Ng01-097E18.b_47_1146 (reverse)

seq1  ATGTAGCATTATCTAGGAAATTAGATTG-TTTTACTTCTCCTGCTGGAAA  49
      |||||| |||||||  ||| |||||||| |||||||  ||||||| ||||
seq2  ATGTAG-ATTATCTTAGAATTTAGATTGTTTTTACTCTTCCTGCT-GAAA  48

seq1  AGCAGTCTTAGCACAGTGCTGGACAC-TCTGGGAGGTGTTGTTAGTGCCT  98
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCAGTCTTAGCACAGTGCTGGACACTTCTGGGAGGTGTTGTTAGTGCCT  98

seq1  GGCCACCTGGCTTTCTGGAGGTGACTCAAACACTACCATTTCTGTCCTTG  148
       | |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  -GACACCTGGC-TTCTGGAGGTGACTCAAACACTACCATTTCTGTCCTTG  146

seq1  CTTTGAAAAGAATCATAACTCCACAGCCCAGCAAGTTAGGTCTCAGC-AC  197
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  CTTTGAAAAGAATCATAACTCCACAGCCCAGCAAGTTAGGTCTCAGCAAA  196

seq1  AAAACTTGAGTTGCAGCGGTATCC-ACCATTGGCTCACCTCCACC-TTTT  245
      |||||| ||||||||||||||||| || ||||||||||||||||| ||||
seq2  AAAACTAGAGTTGCAGCGGTATCCAACAATTGGCTCACCTCCACCATTTT  246

seq1  CCCGTAGACCAGGCACCCACCCTGGATGCTTCTTCTAGTCC-TTGGTTCC  294
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCGTAGACCAGGCACCCACCCTGGATGCTTCTTCTAGTCCTTTGGTTCC  296

seq1  TGCCCCCTTCCATCCAGAACAAGCTCAAGACTCCCCTTCTCCTCAGCAGC  344
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-CCCCTTCCATCCAGAACAAGCTCAAGACTCCCCTTCTCCTCAGCAGC  345

seq1  CTTTCACGGTGTGTTGGGAGGAAGCTGGTGACTCACAAGACGAGTTTACG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACGGTGTGTTGGGAGGAAGCTGGTGACTCACAAGACGAGTTTACG  395

seq1  AACAGCAGGAGCAAACTTTAAAGACATTAATAGCTCAGTGTGTATTTTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGGAGCAAACTTTAAAGACATTAATAGCTCAGTGTGTATTTTCC  445

seq1  TACTTACATCTCATTTGTGGCAAATTAGACTAGTTTTCCTTCCAATATAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACATCTCATTTGTGGCAAATTAGACTAGTTTTCCTTCCAATATAT  495

seq1  GGGTAATGTTTCTTTTTTAAATAAATTCACCAAAGTAGAAATACCAGTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATGTTTCTTTTTTAAATAAATTCACCAAAGTAGAAATACCAGTGG  545

seq1  GCTGACTAGAGAGCACTAGAAAATGAAAGAATTCTCCCGCCGCACAGAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTAGAGAGCACTAGAAAATGAAAGAATTCTCCCGCCGCACAGAAG  595

seq1  ATCAGGAAGAAGAGCAGACGGCTGATTTTTTTTTTCGGTTTCGAGACAGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAAGAAGAGCAGACGGCTGATTTTTTTTTTCGGTTTCGAGACAGG  645

seq1  GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCTGAACTCACTTTGTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCTGAACTCACTTTGTAG  695

seq1  ACCAGGCTGGCCTCGAACCCAGAAATCCACCTGCCTCTGCCTCCCAAGTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTGGCCTCGAACCCAGAAATCCACCTGCCTCTGCCTCCCAAGTG  745

seq1  CTGGGATTAAAGGCATGTGTTACCACTGCCCAGCTCAGACGGCTGATTTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCATGTGTTACCACTGCCCAGCTCAGACGGCTGATTTA  795

seq1  ACATGGAGAAGGTGGGTCTCTTACTTGCTGGCCCCTCCTTCTACACCCCG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGAAGGTGGGTCTCTTACTTGCTGGCCCCTCCTTCTACACCCCG  845

seq1  TAACGTATCAAGAAAGAATTTTGTTTCTTTTTCTGAGTCAGATTTTTTAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTATCAAGAAAGAATTTTGTTTCTTTTTCTGAGTCAGATTTTTTAT  895

seq1  AAGCAAAATAGGCTTAATAATGTCTGCACCTATATCAGCCAGCAGATAGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAATAGGCTTAATAATGTCTGCACCTATATCAGCCAGCAGATAGG  945

seq1  GGTATTTGTTTTGTTTTGTTTTGTTTATTTGTTTGCTTTTTGTGGTTTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGTTTTGTTTTGTTTTGTTTATTTGTTTGCTTTTTGTGGTTTTG  995

seq1  TTTTGCCTTGCTAAAAGGCATATGTCTCTTAGGGACTGTCTTTGTAGGTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTTGCTAAAAGGCATATGTCTCTTAGGGACTGTCTTTGTAGGTA  1045

seq1  TCATCAATGGATTGTTAGTACAAAAAAAAAAAAAAAAGGCCTCCTTGGAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAATGGATTGTTAGTACAAAAAAAAAAAAAAAAGGCCTCCTTGGAG  1095

seq1  AATTC  1099
      |||||
seq2  AATTC  1100

seq1: chr7_124484427_124485264
seq2: B6Ng01-097E18.g_69_909

seq1  GAATTCTCCTTAAGAGGGACGGGGTTTCGTTTTCTCTCGCTCTTGCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTAAGAGGGACGGGGTTTCGTTTTCTCTCGCTCTTGCTTCT  50

seq1  TGCACTCTTGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCTTGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGAT  100

seq1  TCTGGTCTGTTGCGTCTTTCCTGGCCGGTCGTGAGAACGCGTCTAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTGTTGCGTCTTTCCTGGCCGGTCGTGAGAACGCGTCTAATAAC  150

seq1  AAAACCTGGCCATCCAGCCAGCTTCCATTCACTTTCCCTCTCATTTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGGCCATCCAGCCAGCTTCCATTCACTTTCCCTCTCATTTACTG  200

seq1  TTCAGTTCTAGGAAGCTCCTGGGCAGTGAGAAAGAGAGAAGGATGTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCTAGGAAGCTCCTGGGCAGTGAGAAAGAGAGAAGGATGTCAGC  250

seq1  TGGTGGAGGAAATTCCCTTTCAACTCCCTGGAGTCTCTGATCACTTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGGAAATTCCCTTTCAACTCCCTGGAGTCTCTGATCACTTGAAA  300

seq1  GTAAAAGGCATTCCTCAGCTTCCCTGGTAAAGGTGGCCCTGGGGCAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGGCATTCCTCAGCTTCCCTGGTAAAGGTGGCCCTGGGGCAGCCT  350

seq1  TGCTGGGTGAGCTGTCCTAGTTGCAATTTCTATAACTTCCTGTTACTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTGAGCTGTCCTAGTTGCAATTTCTATAACTTCCTGTTACTTTA  400

seq1  CCTTTTCAAAGCCGACTTTCAATGATGGTTCTTAAACACTTTAACCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCAAAGCCGACTTTCAATGATGGTTCTTAAACACTTTAACCTTCC  450

seq1  TTCTAGCCCACCACCCACCAGAGATAGTGGAAGAGAAAGGATACGGGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCCCACCACCCACCAGAGATAGTGGAAGAGAAAGGATACGGGGTG  500

seq1  GGGGTGGGGCCTTTTTAGAAATGGTTCTTTGGAGTAAATTCTATCTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGCCTTTTTAGAAATGGTTCTTTGGAGTAAATTCTATCTGCAT  550

seq1  AGCCAGGATTTCAGCAGTTCAGTTCACAGGTCAGCAGGGCCCAGGACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGATTTCAGCAGTTCAGTTCACAGGTCAGCAGGGCCCAGGACCAA  600

seq1  CAGGAACACCAGGAAAAGTTCTCAGCTGTGCCTCTCAATGAAGCGAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACACCAGGAAAAGTTCTCAGCTGTGCCTCTCAATGAAGCGAAGAT  650

seq1  CATAAGATCAGAGAAGACTTGAGACCGAGAAGTGTTGCACAGCTAGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATCAGAGAAGACTTGAGACCGAGAAGTGTTGCACAGCTAGCTCT  700

seq1  ACC-AGCCAGCCCC-TTTCACAGTCTGTTGAGTCCTATTTATACTCCCTT  748
       || |||||||||| ||||||||||||||||||||||||||||||||| |
seq2  TCCTAGCCAGCCCCTTTTCACAGTCTGTTGAGTCCTATTTATACTCCCCT  750

seq1  CAAACATCAGTCTTACCTCA-CCATGTGTATTGCCTCAGCATGTGAGTTT  797
       ||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  TAAACATCAGTCTTACCTCACCCATGTGTATTGCCTCATCATGTGAGTTT  800

seq1  GTCTCAGCTGACATCACTCTGCCGGTCAGCCCGAGCCTGCA  838
      |||||||||||||||||||||||||||| ||||||||||||
seq2  GTCTCAGCTGACATCACTCTGCCGGTCAACCCGAGCCTGCA  841