BAC Information

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BAC

Clone NameB6Ng01-097N22
Chromosome7 (Build37)
Map Location 89,720,907 - 89,722,016
singlet/doubletsinglet
Overlap geneAdamtsl3
Upstream geneWhdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3
Downstream gene1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097N22.bB6Ng01-097N22.g
ACCDH908124DH908125
length1,125489
definitionDH908124|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N22, 5' end.DH908125|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaaggaatggtctgtacttctgtttgcttgcttgcttgcttt
ttctttccatcattgttaagtggcagttagttaaaaatcttatgttgtca
atcaaaaacaaataaacaaaaacctatgttcttagtttggcagtggccag
ggtgacatcttctgtggacactgcctcatccctgtgatgaagcagataag
catgtgtatgtgacattgtacaaagatgagctgagggtacttgaacaaaa
ccaaaggccatcttgagatcaataggcctgaattcttaactggctctgaa
tggactctaggtcagttcactgtacttgttcctcaccaacaagcttcttt
actacaaaaatactgtttccaaacccaatggccacccacaggactctgga
agttgttcttatgaaccaacattcccatacgcactttgcagttatttcca
aggatctgagaaggccatatgtttgggtctcaatgtgttttggttttctc
ccacagtgacttttccagggctggtaatagagtaagatctttaagtaaat
caatgtcatgatcttctgactctagcaatgcctcacttccatcacttgcc
agtgcctactagccttcagtcccacaccctgtgatctgcccagggaccag
cacatattatcaaagagtaatcagacttcttcccacagcaccccatgagc
ttcccttcagtaaaacaagtgtgaaagctgtcaccataggggacagattg
ggcttgcattccctttggtctcgacccattaactagagtccatgtctgag
agcaaatgaggctctgttccaactctgatttcctcttagtctgtcctgtg
gcttctgggcttcctttgccatctggctggtggttgaaaggcatcaaata
tgagagccccttgtgtgcctactacagcaaggggcatgtgatctaagtaa
atggacttaactctcacactcttcttgatgagattccctaacatcatttt
tcattttgcagaacaagagcctgggatttcttaagctattacataccagc
caccataaaataaacaccataccaaattatgtggctcaaccttgcgcatt
cattcttgcttaaagtactagacag

tgctgaagagagggacgaaagattgtaggagccagagggatcaaggacat
caaaagaaaaaccttcagaatcaactaacctgggctcacaggggcccaaa
gagacaaccaacaacccgtgaacctgtatgggactgacctaggcctaggc
acgcatgttacagctgtgtagcttggagttcttgtgggactccaacagtg
ggagcaggggctgtctctggctcttttgcctacttgtgggacctttttcc
tcctacattactgcctcatccagccttgatagaagggaagtgtctagtcc
tactgcgacttgatatgcaatgtttggttaataacccggggaagatggcc
attgttttaagggaaacgaggaggcatggacagtgggggtaagtggtagg
aagatagggagtacgtggaggctggggcaaaaggatctaatgcttgtggc
ttgccttgtctacagaatgagatttaagctgtcttaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89720907_89722016
seq2: B6Ng01-097N22.b_48_1172

seq1  GAATTCATCAAGGAATGGTCTGTACTTCTGTTTGCTTGCTTGCTTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAGGAATGGTCTGTACTTCTGTTTGCTTGCTTGCTTGCTTT  50

seq1  TTCTTTCCATCATTGTTAAGTGGCAGTTAGTTAAAAATCTTATGTTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCATCATTGTTAAGTGGCAGTTAGTTAAAAATCTTATGTTGTCA  100

seq1  ATCAAAAACAAATAAACAAAAACCTATGTTCTTAGTTTGGCAGTGGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAACAAATAAACAAAAACCTATGTTCTTAGTTTGGCAGTGGCCAG  150

seq1  GGTGACATCTTCTGTGGACACTGCCTCATCCCTGTGATGAAGCAGATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACATCTTCTGTGGACACTGCCTCATCCCTGTGATGAAGCAGATAAG  200

seq1  CATGTGTATGTGACATTGTACAAAGATGAGCTGAGGGTACTTGAACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTATGTGACATTGTACAAAGATGAGCTGAGGGTACTTGAACAAAA  250

seq1  CCAAAGGCCATCTTGAGATCAATAGGCCTGAATTCTTAACTGGCTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGCCATCTTGAGATCAATAGGCCTGAATTCTTAACTGGCTCTGAA  300

seq1  TGGACTCTAGGTCAGTTCACTGTACTTGTTCCTCACCAACAAGCTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTAGGTCAGTTCACTGTACTTGTTCCTCACCAACAAGCTTCTTT  350

seq1  ACTACAAAAATACTGTTTCCAAACCCAATGGCCACCCACAGGACTCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAAATACTGTTTCCAAACCCAATGGCCACCCACAGGACTCTGGA  400

seq1  AGTTGTTCTTATGAACCAACATTCCCATACGCACTTTGCAGTTATTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTCTTATGAACCAACATTCCCATACGCACTTTGCAGTTATTTCCA  450

seq1  AGGATCTGAGAAGGCCATATGTTTGGGTCTCAATGTGTTTTGGTTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTGAGAAGGCCATATGTTTGGGTCTCAATGTGTTTTGGTTTTCTC  500

seq1  CCACAGTGACTTTTCCAGGGCTGGTAATAGAGTAAGATCTTTAAGTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGACTTTTCCAGGGCTGGTAATAGAGTAAGATCTTTAAGTAAAT  550

seq1  CAATGTCATGATCTTCTGACTCTAGCAATGCCTCACTTCCATCACTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCATGATCTTCTGACTCTAGCAATGCCTCACTTCCATCACTTGCC  600

seq1  AGTGCCTACTAGCCTTCAGTCCCACACCCTGTGATCTGCCCAGGGACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTACTAGCCTTCAGTCCCACACCCTGTGATCTGCCCAGGGACCAG  650

seq1  CACATATTATCAAAGAGTAATCAGACTTCTTCCCACAGCACCCCATGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTATCAAAGAGTAATCAGACTTCTTCCCACAGCACCCCATGAGC  700

seq1  TTCCCTTCAGTAAAACAAGTGTGAAAGCTGTCACCATAGGGGACAGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCAGTAAAACAAGTGTGAAAGCTGTCACCATAGGGGACAGATTG  750

seq1  GGCTTGCATTCCCTTTGGTCTCGACCCATTAACTAGAGTCCATGTCTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCATTCCCTTTGGTCTCGACCCATTAACTAGAGTCCATGTCTGAG  800

seq1  AGCAAATGAGGCTCTGTTCCAACTCTGATTTCCTCTTAGTCTGTCCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGAGGCTCTGTTCCAACTCTGATTTCCTCTTAGTCTGTCCTGTG  850

seq1  GCTTCTGGGCTTCCTTTGCCATCTGGCTGGTGGTTG-AAGGCATCAAATA  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCTTCTGGGCTTCCTTTGCCATCTGGCTGGTGGTTGAAAGGCATCAAATA  900

seq1  TGAGAGCCCCTTGTGTGCCTACTACAGCAAGGGGCATGTGATCTAAGTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCCCCTTGTGTGCCTACTACAGCAAGGGGCATGTGATCTAAGTAA  950

seq1  ATGGACTTAACTCTCACACTCTTC-TGATGAGATT-CCTAACATCA-TTT  996
      |||||||||||||||||||||||| |||||||||| |||||||||| |||
seq2  ATGGACTTAACTCTCACACTCTTCTTGATGAGATTCCCTAACATCATTTT  1000

seq1  TCATTTTGCAG-ACAAGAG-CTGGGA-TTCTT-AGCTATTACATACAAG-  1041
      ||||||||||| ||||||| |||||| ||||| ||||||||||||| || 
seq2  TCATTTTGCAGAACAAGAGCCTGGGATTTCTTAAGCTATTACATACCAGC  1050

seq1  CAACATAAAATAAACA-CATA-CAAATAATGT-GCTCAAACTT--GCATT  1086
      || ||||||||||||| |||| ||||| |||| |||||| |||  |||||
seq2  CACCATAAAATAAACACCATACCAAATTATGTGGCTCAACCTTGCGCATT  1100

seq1  CATTCTTGC-TAAAGTACTAGACAG  1110
      ||||||||| |||||||||||||||
seq2  CATTCTTGCTTAAAGTACTAGACAG  1125


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