BAC Information

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BAC

Clone NameB6Ng01-097P20
Chromosome7 (Build37)
Map Location 134,887,167 - 135,018,241
singlet/doubletdoublet
Overlap geneFbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668
Upstream geneLOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2
Downstream geneZfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097P20.bB6Ng01-097P20.g
ACCDH908211DH908212
length1,085955
definitionDH908211|Mus musculus domesticus DNA, BAC clone: B6Ng01-097P20, 5' end.DH908212|Mus musculus domesticus DNA, BAC clone: B6Ng01-097P20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,017,161 - 135,018,241)(134,887,167 - 134,888,118)
sequence
gaattccaccagaagtttgctctcagtcaccaaacagttttggagtaaca
ggtgcgtagaacaaagttccctggacccgattgctggaggtgaaaaatta
agaaccaaataataacatatgctagtgctacaatagtcaaggggacagat
ggcagaaatgtccatatctgactacttggcttcaaataccagctaagtct
gtggtaattgcctggcttttctgtgttatctcttatatctcgtgtgtttt
tgtagcacatgtgtggaggtcagagaacaacttactggaattggttctgt
ctttccatcatgtgggtcctgaggatacaactcagcctcgacagaaaacg
cctttacctactggggcatcttgggttcttgttcttgccccaagaacagg
aacctaaccttccggcctgaagctctccccttagggctttattgaacctt
aattactgctgaaaagaccttgttagcaaacacagtcttggtgcggctag
agcttcaacataagaattttagaagacagatactcagctataacaggctt
ctaaggcatcaggacatgaacttaagtcaaagaagtcagttaagtgtgca
taaaatacacatgatgtgtaatccatggcaggaagccggcaccttaaaag
aaaaggtttttgaagttaaaatgtagttaggataaacatctcattatctg
aaaggagtatatgaggtgtggtggtgcacatagtaacattataacactca
ggtgagagtttccaggccagctgaggctaatagtgaaactttgtctcaaa
gctagaaattgcaaacagtgccacgaagaaagacatagagccaaagtaca
ggattcacagctgtaatccctacactgagggggtttaaggcaggaagaag
aatcaagccagcctgagctacatagtaagatcctgcacacccccttcaac
aacaaggtagacaagaaaaccttcattatttttatgtatatgagtgttat
gcttacatgtattgtatgtgtaccaagtgttatgcctgatgctttacatg
tatggtatgtgtaccaagttatgcctggatgctta
gaattcactctgtagaccaggcaggactactcaaactcagaaatcttcct
gcctctgcctcacaagtgctggccataaaggtgtgccacctggctattac
aggcttcttaggatcaaatgagaggctgaacgcatttggtattccaggtg
ggactgagatgtaaactccttgcagagtgctttgcctcccatcaatgata
tctggtttgattcccagcagggcaaaaccaaacaacacctgtgaggtgca
tccagcaagcttccaagttagtggaaaggacactaaacaaagctcatctg
ggaattactagaaggttttattgtggcagtggaattttaataggaacttg
atgggtaaacaactgggtggagacgtgggatggatgaaaaagtacaactt
tggtccacgcaaggagagcgctagaaggccagaaagcagtccttgctagt
tgaaagaaacgccgccgtgtggatttaaaatggacagacacttccctggg
agccacgactgttacggggctgcaaggagcccctacttaggttaaggcta
gtagtcctagcaaactgagacttgacacagttttgaccggagttaacttc
ctaagcagaaaaaccacacccaccaagtctccagtagggctggaaaccca
gcagagacaaggaagcagagattggcttgggggtagtactgagcaaattt
tctaggacgcaggaggtcatccacatggcacaaagcagtccctttggcaa
ctgagagttcaccggaagcctccaaggctcaaaagacaaggcatgaggct
tcacagctccaaaaggctacaattcaggttgagaaaatttggtcagtgtg
tgcgtcctctgttaaaggagagagggcgccccctgggaagagtgctggta
gagatggttggaatgactcagatgaggactgaaggagggagggggtgggg
gttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135017161_135018241
seq2: B6Ng01-097P20.b_49_1133 (reverse)

seq1  TAAGCAT-CAGGCATACACTTGGTACACATA-CATACATGT-AAGCATCA  47
      ||||||| |||||||| |||||||||||||| ||||||||| ||||||||
seq2  TAAGCATCCAGGCATA-ACTTGGTACACATACCATACATGTAAAGCATCA  49

seq1  GGCAT-ACACTTGGTACACATAC-ATACATGTAAGCATAACACTCATATA  95
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGCATAACACTTGGTACACATACAATACATGTAAGCATAACACTCATATA  99

seq1  CATAAAAAATAATGAAGGTTTTCTTGTCTACCTTGTTGTTGGAGGGGGTG  145
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAT-AAAAATAATGAAGGTTTTCTTGTCTACCTTGTTGTTGAAGGGGGTG  148

seq1  TGCAGGATCTTACTATGTAGCTCAGGCTGGCCTTGATTCTTCTTCCTGCC  195
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCAGGATCTTACTATGTAGCTCAGGCTGG-CTTGATTCTTCTTCCTGCC  197

seq1  TT-AACCCCCTCAGTGTAGGGATTACAGCTGTGAATCCTGTACTTTGGCT  244
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCCCCTCAGTGTAGGGATTACAGCTGTGAATCCTGTACTTTGGCT  247

seq1  CTATGTCTTTCTTCGTGGCACTGTTTGCAATTTCTAGCTTTGAGACAAAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCTTTCTTCGTGGCACTGTTTGCAATTTCTAGCTTTGAGACAAAG  297

seq1  TTTCACTATTAGCCTCAGCTGGCCTGG-AACTCTCACCTGAGTGTTATAA  343
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTCACTATTAGCCTCAGCTGGCCTGGAAACTCTCACCTGAGTGTTATAA  347

seq1  TGTTACTATGTGCACCACCACACCTCATATACTCCTTTCAGATAATGAGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTATGTGCACCACCACACCTCATATACTCCTTTCAGATAATGAGA  397

seq1  TGTTTATCCTAACTACATTTTAACTTCAAAAACCTTTTCTTTTAAGGTGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCCTAACTACATTTTAACTTCAAAAACCTTTTCTTTTAAGGTGC  447

seq1  CGGCTTCCTGCCATGGATTACACATCATGTGTATTTTATGCACACTTAAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTCCTGCCATGGATTACACATCATGTGTATTTTATGCACACTTAAC  497

seq1  TGACTTCTTTGACTTAAGTTCATGTCCTGATGCCTTAGAAGCCTGTTATA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTTTGACTTAAGTTCATGTCCTGATGCCTTAGAAGCCTGTTATA  547

seq1  GCTGAGTATCTGTCTTCTAAAATTCTTATGTTGAAGCTCTAGCCGCACCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTATCTGTCTTCTAAAATTCTTATGTTGAAGCTCTAGCCGCACCA  597

seq1  AGACTGTGTTTGCTAACAAGGTCTTTTCAGCAGTAATTAAGGTTCAATAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGTTTGCTAACAAGGTCTTTTCAGCAGTAATTAAGGTTCAATAA  647

seq1  AGCCCTAAGGGGAGAGCTTCAGGCCGGAAGGTTAGGTTCCTGTTCTTGGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTAAGGGGAGAGCTTCAGGCCGGAAGGTTAGGTTCCTGTTCTTGGG  697

seq1  GCAAGAACAAGAACCCAAGATGCCCCAGTAGGTAAAGGCGTTTTCTGTCG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAACAAGAACCCAAGATGCCCCAGTAGGTAAAGGCGTTTTCTGTCG  747

seq1  AGGCTGAGTTGTATCCTCAGGACCCACATGATGGAAAGACAGAACCAATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGTTGTATCCTCAGGACCCACATGATGGAAAGACAGAACCAATT  797

seq1  CCAGTAAGTTGTTCTCTGACCTCCACACATGTGCTACAAAAACACACGAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGTTGTTCTCTGACCTCCACACATGTGCTACAAAAACACACGAG  847

seq1  ATATAAGAGATAACACAGAAAAGCCAGGCAATTACCACAGACTTAGCTGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAGATAACACAGAAAAGCCAGGCAATTACCACAGACTTAGCTGG  897

seq1  TATTTGAAGCCAAGTAGTCAGATATGGACATTTCTGCCATCTGTCCCCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAGCCAAGTAGTCAGATATGGACATTTCTGCCATCTGTCCCCTT  947

seq1  GACTATTGTAGCACTAGCATATGTTATTATTTGGTTCTTAATTTTTCACC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGTAGCACTAGCATATGTTATTATTTGGTTCTTAATTTTTCACC  997

seq1  TCCAGCAATCGGGTCCAGGGAACTTTGTTCTACGCACCTGTTACTCCAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAATCGGGTCCAGGGAACTTTGTTCTACGCACCTGTTACTCCAAA  1047

seq1  ACTGTTTGGTGACTGAGAGCAAACTTCTGGTGGAATTC  1081
      ||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGGTGACTGAGAGCAAACTTCTGGTGGAATTC  1085

seq1: chr7_134887167_134888118
seq2: B6Ng01-097P20.g_70_1024

seq1  GAATTCACTCTGTAGACCAGGCAGGACTACTCAAACTCAGAAATCTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCAGGACTACTCAAACTCAGAAATCTTCCT  50

seq1  GCCTCTGCCTCACAAGTGCTGGCCATAAAGGTGTGCCACCTGGCTATTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCACAAGTGCTGGCCATAAAGGTGTGCCACCTGGCTATTAC  100

seq1  AGGCTTCTTAGGATCAAATGAGAGGCTGAACGCATTTGGTATTCCAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCTTAGGATCAAATGAGAGGCTGAACGCATTTGGTATTCCAGGTG  150

seq1  GGACTGAGATGTAAACTCCTTGCAGAGTGCTTTGCCTCCCATCAATGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGATGTAAACTCCTTGCAGAGTGCTTTGCCTCCCATCAATGATA  200

seq1  TCTGGTTTGATTCCCAGCAGGGCAAAACCAAACAACACCTGTGAGGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTGATTCCCAGCAGGGCAAAACCAAACAACACCTGTGAGGTGCA  250

seq1  TCCAGCAAGCTTCCAAGTTAGTGGAAAGGACACTAAACAAAGCTCATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAAGCTTCCAAGTTAGTGGAAAGGACACTAAACAAAGCTCATCTG  300

seq1  GGAATTACTAGAAGGTTTTATTGTGGCAGTGGAATTTTAATAGGAACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTACTAGAAGGTTTTATTGTGGCAGTGGAATTTTAATAGGAACTTG  350

seq1  ATGGGTAAACAACTGGGTGGAGACGTGGGATGGATGAAAAAGTACAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAAACAACTGGGTGGAGACGTGGGATGGATGAAAAAGTACAACTT  400

seq1  TGGTCCACGCAAGGAGAGCGCTAGAAGGCCAGAAAGCAGTCCTTGCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCACGCAAGGAGAGCGCTAGAAGGCCAGAAAGCAGTCCTTGCTAGT  450

seq1  TGAAAGAAACGCCGCCGTGTGGATTTAAAATGGACAGACACTTCCCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAACGCCGCCGTGTGGATTTAAAATGGACAGACACTTCCCTGGG  500

seq1  AGCCACGACTGTTACGGGGCTGCAAGGAGCCCCTACTTAGGTTAAGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACGACTGTTACGGGGCTGCAAGGAGCCCCTACTTAGGTTAAGGCTA  550

seq1  GTAGTCCTAGCAAACTGAGACTTGACACAGTTTTGACCGGAGTTAACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCCTAGCAAACTGAGACTTGACACAGTTTTGACCGGAGTTAACTTC  600

seq1  CTAAGCAGAAAAACCACACCCACCAAGTCTCCAGTAGGGCTGGAAACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGAAAAACCACACCCACCAAGTCTCCAGTAGGGCTGGAAACCCA  650

seq1  GCAGAGACAAGGAAGCAGAGATTGGCTT-GGGGTAGTACTGAGCAAATTT  699
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCAGAGACAAGGAAGCAGAGATTGGCTTGGGGGTAGTACTGAGCAAATTT  700

seq1  TCTAGGACGCAGGAGGTCATCCACATGGCACAAAGCAGTCCCTTTGGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACGCAGGAGGTCATCCACATGGCACAAAGCAGTCCCTTTGGCAA  750

seq1  CTGAGAGTTCACCGGAAGCCTCCAAGGCTCAAAAGACAAGGCATGAGGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTTCACCGGAAGCCTCCAAGGCTCAAAAGACAAGGCATGAGGCT  800

seq1  TCACAGCTCC-AAAGGCTACAATTCAGGTTGAGAAAATTTGGTCAGTGTG  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCTCCAAAAGGCTACAATTCAGGTTGAGAAAATTTGGTCAGTGTG  850

seq1  TGCGTCCTCTGTTAAAAGGAGAGAGGGCGCCCCCTGGGAAGAGTGCTGGG  898
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  TGCGTCCTCTGTT-AAAGGAGAGAGGGCGCCCCCTGGGAAGAGTGCT-GG  898

seq1  TAGAGATGGTTGGAA-GACTCAGATGAGGACTGAA-GAGGGA-GGGGTGG  945
      ||||||||||||||| ||||||||||||||||||| |||||| |||||||
seq2  TAGAGATGGTTGGAATGACTCAGATGAGGACTGAAGGAGGGAGGGGGTGG  948

seq1  GGGTTAA  952
      |||||||
seq2  GGGTTAA  955