BAC Information

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BAC

Clone NameB6Ng01-098F13
Chromosome7 (Build37)
Map Location 34,685,078 - 34,686,251
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803
Downstream geneAbpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15, Chst8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098F13.bB6Ng01-098F13.g
ACCDH908466DH908467
length1,1711,113
definitionDH908466|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F13, 5' end.DH908467|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacctaagtggtcaggaacccaaggtgactggaaccaggttggg
aataggatcggcatgacagacagacaagcactcaatggtgaagctgctgc
tgcaaaatctttacctcagggttcagattatatacacaatcaagaaggaa
caattttctcttgacaaatcacatatcttagttcctctttaaacctaaca
caagtatagcttactaggaaattaaatcacccattggcgcccacctgtgg
ttttgctgccagactgaactttcatattgactcaagaatcttataacctt
ttatttactactctaatgatcttattcaacagcacatgcaatcccaatct
aaactttataatatttcttgcttatttcttttattaccaaatatgtctac
tcctggctatctaggagtaagtatctccaaatgataggaaaacatacatc
tgccacctcaaggtccactgttgctcatctgttaaggcataccaaggagc
cctacttcttattctttcccatagacttaattctgaatatctcattttcc
acaatccatctgattaagttcttatcataaattccagtccatggaagtgg
agcatttgttggattaaacttgtaaggtccatgatatctaggtacttccc
actatcctctactcagcttcacaagaactgactaatcaccccccctttca
ctgttagtcctaattcctataaattctggatttcttcatcctgtatagtt
tctcttttacatctgacaattttattaatgcctaaatctaattgttgtat
taaatttaatgacagcgcccaaaatcatattttctctttgcaagatctgc
aaaatcaattgtgctgtttcagacaaaatctctagtgggatgacattgcg
agcaattcaatcagattctcatctatttttgctacatacaccagctctgt
ggttgaggacactgagggtgaaggacctagcacagtttcctgtctaggta
ctttcagttcctgaaacagctaaaggataatctttcaaatcacaaaattc
ttttgtatcagcaactgcatcagtccaagcttggcagaaggggacatgga
cgggcagactgccatggacctccagagaacttagctccacagcacaaatt
caaggtaaatgttaccattca
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtctgag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccagaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccatctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccacccagaag
ctctgcaactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcacctgtgccacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaagtggccggctgtctggagctgaagatggcgccgccca
gaagctctgcaactctcgcccgtcccggaaacggctggcactctgtattc
cacacggtcacccgtgcagcctgccctccgcggagtcccggagccaagaa
ggctccgccggcgtctgtgccacaaacctctcaggtcggggcagactccc
tgtgttcttacaggaaggtggaccggctgtctggagctgaagatgtgctg
cccaaagctctgcgacttctccgattttagaatcttagatgcagcttgaa
tgtttctttatcaaaggaggttgaacttgtatacttatcccaagcctagt
tgagacttagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34685078_34686251
seq2: B6Ng01-098F13.b_49_1219 (reverse)

seq1  TGAATGGTAACCATTCAC--TGAGATTTGTGCTCTGTGGAGCTAGGTCTC  48
      |||||||||| |||| ||  ||| |||||||  ||||||||||| ||   
seq2  TGAATGGTAA-CATTTACCTTGA-ATTTGTG--CTGTGGAGCTAAGTTCT  46

seq1  CTGGAGGTCCCTGGCAGTCTGCCCGTCCCATGTCCCCTTCTGGCATGCTT  98
      |||||||||| ||||||||||||||| ||||||||||||||| || ||||
seq2  CTGGAGGTCCATGGCAGTCTGCCCGT-CCATGTCCCCTTCTGCCAAGCTT  95

seq1  GGCTGGATGGCAGTTGCTGATAC-AAAGAATTTTGTGATTTGGAAAGATG  147
      ||   ||| |||||||||||||| ||||||||||||||||| ||||||| 
seq2  GGACTGAT-GCAGTTGCTGATACAAAAGAATTTTGTGATTT-GAAAGAT-  142

seq1  TAT-CTTTAGCTGTTTCAGGAACTGAAAGTA-CTAGACAGGAAACTGTGC  195
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATCCTTTAGCTGTTTCAGGAACTGAAAGTACCTAGACAGGAAACTGTGC  192

seq1  TGGGTGCTTCAACCTCAGTGTCCTCAACCACAGAGCTGGTGTATGTAGCA  245
      | ||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCTTCACCCTCAGTGTCCTCAACCACAGAGCTGGTGTATGTAGCA  242

seq1  AAAATAGATGAGAATCTGATTGGAATTGCTCGCAATGTCATCCCACTAGA  295
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAATAGATGAGAATCTGATT-GAATTGCTCGCAATGTCATCCCACTAGA  291

seq1  GATTTTGTCTGAAACAGCACAATTGATTTTGCAGATCTTGCAAAGAGAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTCTGAAACAGCACAATTGATTTTGCAGATCTTGCAAAGAGAAA  341

seq1  ATATGATTTTGGGCGCTGTCATT-AATTTAATACAACAATTAGATTTAGG  394
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATATGATTTTGGGCGCTGTCATTAAATTTAATACAACAATTAGATTTAGG  391

seq1  CATTAATAAAATTGTCAGATGTAAAAGAGAAACTATACAGGATGAAGAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATAAAATTGTCAGATGTAAAAGAGAAACTATACAGGATGAAGAAA  441

seq1  TCCAGAATTTATAGGAATTAGGACTAACAGTGAAAGGGGGGGTGATTAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATTTATAGGAATTAGGACTAACAGTGAAAGGGGGGGTGATTAGT  491

seq1  CAGTTCTTGTGAAGCTGAGTAGAGGATAGTGGGAAGTACCTAGATATCAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTGTGAAGCTGAGTAGAGGATAGTGGGAAGTACCTAGATATCAT  541

seq1  GGACCTTACAAGTTTAATCCAACAAATGCTCCACTTCCATGGACTGGAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTACAAGTTTAATCCAACAAATGCTCCACTTCCATGGACTGGAAT  591

seq1  TTATGATAAGAACTTAATCAGATGGATTGTGGAAAATGAGATATTCAGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATAAGAACTTAATCAGATGGATTGTGGAAAATGAGATATTCAGAA  641

seq1  TTAAGTCTATGGGAAAGAATAAGAAGTAGGGCTCCTTGGTATGCCTTAAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCTATGGGAAAGAATAAGAAGTAGGGCTCCTTGGTATGCCTTAAC  691

seq1  AGATGAGCAACAGTGGACCTTGAGGTGGCAGATGTATGTTTTCCTATCAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCAACAGTGGACCTTGAGGTGGCAGATGTATGTTTTCCTATCAT  741

seq1  TTGGAGATACTTACTCCTAGATAGCCAGGAGTAGACATATTTGGTAATAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATACTTACTCCTAGATAGCCAGGAGTAGACATATTTGGTAATAA  791

seq1  AAGAAATAAGCAAGAAATATTATAAAGTTTAGATTGGGATTGCATGTGCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAAGCAAGAAATATTATAAAGTTTAGATTGGGATTGCATGTGCT  841

seq1  GTTGAATAAGATCATTAGAGTAGTAAATAAAAGGTTATAAGATTCTTGAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATAAGATCATTAGAGTAGTAAATAAAAGGTTATAAGATTCTTGAG  891

seq1  TCAATATGAAAGTTCAGTCTGGCAGCAAAACCACAGGTGGGCGCCAATGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGAAAGTTCAGTCTGGCAGCAAAACCACAGGTGGGCGCCAATGG  941

seq1  GTGATTTAATTTCCTAGTAAGCTATACTTGTGTTAGGTTTAAAGAGGAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTAATTTCCTAGTAAGCTATACTTGTGTTAGGTTTAAAGAGGAAC  991

seq1  TAAGATATGTGATTTGTCAAGAGAAAATTGTTCCTTCTTGATTGTGTATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATGTGATTTGTCAAGAGAAAATTGTTCCTTCTTGATTGTGTATA  1041

seq1  TAATCTGAACCCTGAGGTAAAGATTTTGCAGCAGCAGCTTCACCATTGAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAACCCTGAGGTAAAGATTTTGCAGCAGCAGCTTCACCATTGAG  1091

seq1  TGCTTGTCTGTCTGTCATGCCGATCCTATTCCCAACCTGGTTCCAGTCAC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCTGTCTGTCATGCCGATCCTATTCCCAACCTGGTTCCAGTCAC  1141

seq1  CTTGGGTTCCTGACCACTTAGGTGGAATTC  1174
      ||||||||||||||||||||||||||||||
seq2  CTTGGGTTCCTGACCACTTAGGTGGAATTC  1171