BAC Information

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BAC

Clone NameB6Ng01-098P24
Chromosome7 (Build37)
Map Location 72,149,720 - 72,235,529
singlet/doubletdoublet
Overlap genenone
Upstream geneTrpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
Downstream geneTjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1, H47
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098P24.bB6Ng01-098P24.g
ACCDH908919DH908920
length3201,087
definitionDH908919|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P24, 5' end.DH908920|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,235,346 - 72,235,529)(72,149,720 - 72,150,813)
sequence
caggtttccatctttggtgagtcattgctcatgccgatgtgggctttggt
gatgttggtgatgtggctgtcatcgagtcattttagttccattaagtaac
cccaataaaacttgttggtttaagaaattggacgttggtttttgagtgta
tatgtactttggtctattgctgtttcttctgtctgggattcagtattccc
tgggaatagtgtcatgacatgagatggctcaattggtaagaacacttaat
attcaagtatgaggatccctagcatctgcacacacacacacgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
gaattctaataagaggcaactacaaatggaggtctgggtcaaaccaatga
aaaaatgaaggcaactgaaaacttcaagaaaacaaaaagttaggtagcaa
tcatacaacccaacacaggaagctctctgtgaataacttgtgcatagata
tggggatgtcaactcaagcactgagttaactaaacacacacctattccgg
caggtaaggacgaggaaacccaagggaaagtggagtagagagttaaatgt
tcacccccccccccaataacaagcccaaaaagaagccatgtgtgggagtg
catgtgtataaaccagctactcagagtctgaagaaaagtaacaatgtgaa
atctgggctgggccacacagtgagaccatagaaagagggagagggggaag
gagggccagaggtgatgcttaatttaattaatcaaacatcaagatgcctg
catcgttcttaggaatgtgataccacggtgcccggatgtgggaaggctga
gagtcaaaagtagttccatttgggcaaattaggacagagaatcaccatgt
tttcctatttgatatgtgacttttaaaactatgttattttgctagatgac
aacacattaatttaaaaagtagacacggatgcattttttcccttttagta
gcacaaaacagattatgtccaaatcatattaagtggccttggcatctgta
acagtgttgggagaactgttgatccctttacattttttttttttttttga
tttgttgagacagggtttctctgtgtagccctgactgttctggaactcac
tctgtagaccaggctggcctcgaactcagaaatccaccctgcctctgccc
tccggagtgctgggataaaggcatgcaccacccatggcccggctacattt
tttaatacaaaaaaagaaaaaaattattcctctttcattattgcagaatc
cttaaatctgtctattttcatggcaccatgaggaggagaattctgatatt
tctatacctctactacaaaggttaggataagctggttcttcatatcattt
catgattagtacccttgagctggagagagccattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72235346_72235529
seq2: B6Ng01-098P24.b_48_231 (reverse)

seq1  AAGAAACAGCAATAGACCAAAGTACATATACACTCAAAAACCAACGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGCAATAGACCAAAGTACATATACACTCAAAAACCAACGTCCA  50

seq1  ATTTCTTAAACCAACAAGTTTTATTGGGGTTACTTAATGGAACTAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAAACCAACAAGTTTTATTGGGGTTACTTAATGGAACTAAAATG  100

seq1  ACTCGATGACAGCCACATCACCAACATCACCAAAGCCCACATCGGCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGATGACAGCCACATCACCAACATCACCAAAGCCCACATCGGCATGA  150

seq1  GCAATGACTCACCAAAGATGGAAACCTGGAATTC  184
      ||||||||||||||||||||||||||||||||||
seq2  GCAATGACTCACCAAAGATGGAAACCTGGAATTC  184

seq1: chr7_72149720_72150813
seq2: B6Ng01-098P24.g_68_1154

seq1  GAATTCTAATAAGAGGCAACTACAAATGGAGGTCTGGGTCAAACCAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATAAGAGGCAACTACAAATGGAGGTCTGGGTCAAACCAATGA  50

seq1  AAAAATGAAGGCAACTGAAAACTTCAAGAAAACAAAAAGTTAGGTAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAGGCAACTGAAAACTTCAAGAAAACAAAAAGTTAGGTAGCAA  100

seq1  TCATACAACCCAACACAGGAAGCTCTCTGTGAATAACTTGTGCATAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAACCCAACACAGGAAGCTCTCTGTGAATAACTTGTGCATAGATA  150

seq1  TGGGGATGTCAACTCAAGCACTGAGTTAACTAAACACACACCTATTCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATGTCAACTCAAGCACTGAGTTAACTAAACACACACCTATTCCGG  200

seq1  CAGGTAAGGACGAGGAAACCCAAGGGAAAGTGGAGTAGAGAGTTAAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAGGACGAGGAAACCCAAGGGAAAGTGGAGTAGAGAGTTAAATGT  250

seq1  TCACCCCCCCCCCCAATAACAAGCCCAAAAAGAAGCCATGTGTGGGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCCCCCCCCAATAACAAGCCCAAAAAGAAGCCATGTGTGGGAGTG  300

seq1  CATGTGTATAAACCAGCTACTCAGAGTCTGAAGAAAAGTAACAATGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTATAAACCAGCTACTCAGAGTCTGAAGAAAAGTAACAATGTGAA  350

seq1  ATCTGGGCTGGGCCACACAGTGAGACCATAGAAAGAGGGAGAGGGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGCTGGGCCACACAGTGAGACCATAGAAAGAGGGAGAGGGGGAAG  400

seq1  GAGGGCCAGAGGTGATGCTTAATTTAATTAATCAAACATCAAGATGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCAGAGGTGATGCTTAATTTAATTAATCAAACATCAAGATGCCTG  450

seq1  CATCGTTCTTAGGAATGTGATACCACGGTGCCCGGATGTGGGAAGGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTTCTTAGGAATGTGATACCACGGTGCCCGGATGTGGGAAGGCTGA  500

seq1  GAGTCAAAAGTAGTTCCATTTGGGCAAATTAGGACAGAGAATCACCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAAAGTAGTTCCATTTGGGCAAATTAGGACAGAGAATCACCATGT  550

seq1  TTTCCTATTTGATATGTGACTTTTAAAACTATGTTATTTTGCTAGATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATTTGATATGTGACTTTTAAAACTATGTTATTTTGCTAGATGAC  600

seq1  AACACATTAATTTAAAAAGTAGACACGGATGCATTTTTTCCCTTTTAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTAATTTAAAAAGTAGACACGGATGCATTTTTTCCCTTTTAGTA  650

seq1  GCACAAAACAGATTATGTCCAAATCATATTAAGTGGCCTTGGCATCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAACAGATTATGTCCAAATCATATTAAGTGGCCTTGGCATCTGTA  700

seq1  ACAGTGTTGGGAGAACTGTTGATCCCTTTACATTTTTTTTTTTTTTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTGGGAGAACTGTTGATCCCTTTACATTTTTTTTTTTTTTTTGA  750

seq1  TTTGTTGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTTCTGGAACTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTTCTGGAACTCAC  800

seq1  TCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCA-CCTGCCTCTG-CC  848
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  TCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCCTGCCTCTGCCC  850

seq1  TCCGGAGTGCTGGGATTAAAGGCATGCACCA-CCAT-GCCCGGCTACATT  896
      ||||||||||||||| ||||||||||||||| |||| |||||||||||||
seq2  TCCGGAGTGCTGGGA-TAAAGGCATGCACCACCCATGGCCCGGCTACATT  899

seq1  TTTTAAATACAAAAAA--GAAAAAATTATT-CTCTTCAATTATGCCAGAA  943
      |||| |||||||||||   ||||||||||| |||||  |||||  |||||
seq2  TTTT-AATACAAAAAAAGAAAAAAATTATTCCTCTTTCATTATTGCAGAA  948

seq1  TCCTTAAATCTGTCTATTTTCATGGCACCATGAGGAAGGAGAATTCTGAT  993
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCTTAAATCTGTCTATTTTCATGGCACCATGAGG-AGGAGAATTCTGAT  997

seq1  ATTTCTATACCTCTAACTACCAAAAGGGTTAAGATAAGCTGGTTTCTCCA  1043
      |||||||||||||| |||||   || ||||| |||||||||| |||| ||
seq2  ATTTCTATACCTCT-ACTAC---AAAGGTTAGGATAAGCTGG-TTCTTCA  1042

seq1  ATTATCATTTCATGAATAAAGTACCCTTGGAGCTGGAGAGAAGCCAATAT  1093
        ||||||||||||| |  ||||||||| ||||||||||| ||||| |||
seq2  --TATCATTTCATGATT--AGTACCCTT-GAGCTGGAGAG-AGCCATTAT  1086

seq1  T  1094
      |
seq2  T  1087