BAC Information

Click to search

BAC

Clone NameB6Ng01-099E05
Chromosome7 (Build37)
Map Location 129,587,742 - 129,720,529
singlet/doubletdoublet
Overlap genePrkcb1
Upstream geneHs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, LOC668486
Downstream geneCacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099E05.bB6Ng01-099E05.g
ACCDH909106DH909107
length7881,172
definitionDH909106|Mus musculus domesticus DNA, BAC clone: B6Ng01-099E05, 5' end.DH909107|Mus musculus domesticus DNA, BAC clone: B6Ng01-099E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,719,742 - 129,720,529)(129,587,742 - 129,588,920)
sequence
tccagtaagctttactcctctcttaaaatacactcagggtagagtggtat
cggggggcatcctctcctctgaggagaaggggagggagaaggggccaggg
atttgcaaggacaggactgggggaagggagacagggcattgtgattggga
tgtaaagtgaaaaatgaattatggaaagaaatattgttaaacgtaagcag
cttttcaaagatctatccttcctcaccttaaaaaaaatagtcttagaaat
tcagtttatggggtttttgtcattgctgtcatttggttggctatccggct
tgctttttgtttattcgtttagttggttggtttttgtcctttgttttttt
ctgactatggtgagacaggcctgtaatgaagcacgtgagcagctgaggca
gaaagaccataagaccatctcgtactatatagcaagactaaaataagtac
ataagttgaaattcactttaaaaactgaaacgtaattgcttaaatatgtt
aaatcttcataactggaaaggcactgtccttgtaaaaactataaactcag
tctggactctgctatttacattctatatccaatttgactttggtgcatca
atattttaaagaatttattttatatatcaaaaacaaacaccatttgtcca
tgtcacaaagttcatatcctgcagtagccaggaatgacaaagtttggaaa
gtccaactgggggccaaccagagccaaccttgagtagaggcaaacttgag
agcttcctctgaacatatgtttgtgtgtgtgtgtgtgt
gaattccaagggagataatgatgcaagaataaaagatgaatgtggaccag
aaggaaatactggggaggactttctaattatgacagggggatagtacccc
gaaagagaaagggaaagtatgccttattacacatggacacctatgaatac
acacatacacacatacaaatacacatgcataccacacatgtacatataca
tgcacatacgtacaccacacacatacatagcatgaacagatagaaagaca
tacacgtgcaaacatatatacacacctaaacacagatacgtgcttctccc
cacagcctctgcacactgacttaaagttcatcagcaggattaaaaggcaa
atgaagaactgggaaaatgctatattgtgaatgaatacttaatatcctta
attaatacacggggaaattcattacaagtaattagcaagtaatgaacttg
aatttaaaaatgggcaaatagaggctggggatatagttcagtggagaaag
tgcttgcctagcacatgaaaggctctggagttcatccttgtaccataaaa
tgggaaggggtgaagaataataaaagcaaattaacagtagcaatgtatac
taattaaatacatatttcctccagttactgttaggcagttcccatgaaat
ggctctgcaaagtcccttgtttacctaggaatcattactttgtaaaccat
ttccaggtaagaaagtgacaacctaaaagggttaaataattttcccagag
tcacagagctaactgccagtggcaggagtgacgtttgaaagtggctatcc
cttcgtccctgacactcactgactttgaccatgtgtgtataggggcccag
gaagtcatctgtggagttctaccaggtttacacagtagaagttcatcctt
gaaactgaacaatgactcaccaggtaaaggcagggattagaagccattta
agcaagcaccagtcatcacacctacggtctttcatacacgctttcagttg
tattcatcctctctgcaagaacaaacagcgccccctctccctgtggcggg
tgggtggaactgcagcttctgacttcgtacatatcagctgtacagcatct
cagtccacctaatcctctataagtttccagccctcttttgtcctctggaa
ctaatagcctttgttgaagtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129719742_129720529
seq2: B6Ng01-099E05.b_55_842 (reverse)

seq1  ACACACACACACACACAAACATATGTTCAGAGGAAGCTCTCAAGTTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAAACATATGTTCAGAGGAAGCTCTCAAGTTTGCC  50

seq1  TCTACTCAAGGTTGGCTCTGGTTGGCCCCCAGTTGGACTTTCCAAACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCAAGGTTGGCTCTGGTTGGCCCCCAGTTGGACTTTCCAAACTTT  100

seq1  GTCATTCCTGGCTACTGCAGGATATGAACTTTGTGACATGGACAAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCCTGGCTACTGCAGGATATGAACTTTGTGACATGGACAAATGGT  150

seq1  GTTTGTTTTTGATATATAAAATAAATTCTTTAAAATATTGATGCACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTGATATATAAAATAAATTCTTTAAAATATTGATGCACCAAA  200

seq1  GTCAAATTGGATATAGAATGTAAATAGCAGAGTCCAGACTGAGTTTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTGGATATAGAATGTAAATAGCAGAGTCCAGACTGAGTTTATAG  250

seq1  TTTTTACAAGGACAGTGCCTTTCCAGTTATGAAGATTTAACATATTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAAGGACAGTGCCTTTCCAGTTATGAAGATTTAACATATTTAAG  300

seq1  CAATTACGTTTCAGTTTTTAAAGTGAATTTCAACTTATGTACTTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACGTTTCAGTTTTTAAAGTGAATTTCAACTTATGTACTTATTTTA  350

seq1  GTCTTGCTATATAGTACGAGATGGTCTTATGGTCTTTCTGCCTCAGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCTATATAGTACGAGATGGTCTTATGGTCTTTCTGCCTCAGCTGC  400

seq1  TCACGTGCTTCATTACAGGCCTGTCTCACCATAGTCAGAAAAAAACAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTGCTTCATTACAGGCCTGTCTCACCATAGTCAGAAAAAAACAAAG  450

seq1  GACAAAAACCAACCAACTAAACGAATAAACAAAAAGCAAGCCGGATAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAACCAACCAACTAAACGAATAAACAAAAAGCAAGCCGGATAGCC  500

seq1  AACCAAATGACAGCAATGACAAAAACCCCATAAACTGAATTTCTAAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATGACAGCAATGACAAAAACCCCATAAACTGAATTTCTAAGACT  550

seq1  ATTTTTTTTAAGGTGAGGAAGGATAGATCTTTGAAAAGCTGCTTACGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAAGGTGAGGAAGGATAGATCTTTGAAAAGCTGCTTACGTTT  600

seq1  AACAATATTTCTTTCCATAATTCATTTTTCACTTTACATCCCAATCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATTTCTTTCCATAATTCATTTTTCACTTTACATCCCAATCACAA  650

seq1  TGCCCTGTCTCCCTTCCCCCAGTCCTGTCCTTGCAAATCCCTGGCCCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGTCTCCCTTCCCCCAGTCCTGTCCTTGCAAATCCCTGGCCCCTT  700

seq1  CTCCCTCCCCTTCTCCTCAGAGGAGAGGATGCCCCCCGATACCACTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCCTTCTCCTCAGAGGAGAGGATGCCCCCCGATACCACTCTAC  750

seq1  CCTGAGTGTATTTTAAGAGAGGAGTAAAGCTTACTGGA  788
      ||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGTATTTTAAGAGAGGAGTAAAGCTTACTGGA  788

seq1: chr7_129587742_129588920
seq2: B6Ng01-099E05.g_66_1237

seq1  GAATTCCAAGGGAGATAATGATGCAAGAATAAAAGATGAATGTGGACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGGAGATAATGATGCAAGAATAAAAGATGAATGTGGACCAG  50

seq1  AAGGAAATACTGGGGAGGACTTTCTAATTATGACAGGGGGATAGTACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATACTGGGGAGGACTTTCTAATTATGACAGGGGGATAGTACCCC  100

seq1  GAAAGAGAAAGGGAAAGTATGCCTTATTACACATGGACACCTATGAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAAGGGAAAGTATGCCTTATTACACATGGACACCTATGAATAC  150

seq1  ACACATACACACATACAAATACACATGCATACCACACATGTACATATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACATACAAATACACATGCATACCACACATGTACATATACA  200

seq1  TGCACATACGTACACCACACACATACATAGCATGAACAGATAGAAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATACGTACACCACACACATACATAGCATGAACAGATAGAAAGACA  250

seq1  TACACGTGCAAACATATATACACACCTAAACACAGATACGTGCTTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTGCAAACATATATACACACCTAAACACAGATACGTGCTTCTCCC  300

seq1  CACAGCCTCTGCACACTGACTTAAAGTTCATCAGCAGGATTAAAAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTCTGCACACTGACTTAAAGTTCATCAGCAGGATTAAAAGGCAA  350

seq1  ATGAAGAACTGGGAAAATGCTATATTGTGAATGAATACTTAATATCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAACTGGGAAAATGCTATATTGTGAATGAATACTTAATATCCTTA  400

seq1  ATTAATACACGGGGAAATTCATTACAAGTAATTAGCAAGTAATGAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACACGGGGAAATTCATTACAAGTAATTAGCAAGTAATGAACTTG  450

seq1  AATTTAAAAATGGGCAAATAGAGGCTGGGGATATAGTTCAGTGGAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAATGGGCAAATAGAGGCTGGGGATATAGTTCAGTGGAGAAAG  500

seq1  TGCTTGCCTAGCACATGAAAGGCTCTGGAGTTCATCCTTGTACCATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCCTAGCACATGAAAGGCTCTGGAGTTCATCCTTGTACCATAAAA  550

seq1  TGGGAAGGGGTGAAGAATAATAAAAGCAAATTAACAGTAGCAATGTATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGGGTGAAGAATAATAAAAGCAAATTAACAGTAGCAATGTATAC  600

seq1  TAATTAAATACATATTTCCTCCAGTTACTGTTAGGCAGTTCCCATGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATACATATTTCCTCCAGTTACTGTTAGGCAGTTCCCATGAAAT  650

seq1  GGCTCTGCAAAGTCCCTTGTTTACCTAGGAATCATTACTTTGTAAACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCAAAGTCCCTTGTTTACCTAGGAATCATTACTTTGTAAACCAT  700

seq1  TTCCAGGTAAGAAAGTGACAACCTAAAAGGGTTAAATAATTTTCCCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGTAAGAAAGTGACAACCTAAAAGGGTTAAATAATTTTCCCAGAG  750

seq1  TCACAGAGCTAACTGCCAGTGGCAGGAGTGACGTTTGAAAGTGGCTATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGCTAACTGCCAGTGGCAGGAGTGACGTTTGAAAGTGGCTATCC  800

seq1  CTTCGTCCCTGACACTCACTGACTTTGACCATGTGTGTATAGGGGCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTCCCTGACACTCACTGACTTTGACCATGTGTGTATAGGGGCCCAG  850

seq1  GAAGTCATCTGTGGAGTTCTACCAGGTTTACACAGTAGAAGTTCATCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCATCTGTGGAGTTCTACCAGGTTTACACAGTAGAAGTTCATCCTT  900

seq1  GAAACTGAACAATGACTCACCAGGTAAAAGGCAGGGATTAGAAGCCATTT  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAAACTGAACAATGACTCACCAGGT-AAAGGCAGGGATTAGAAGCCATTT  949

seq1  AAGCAAAGCACCAGTCATCACACCTACGGTCTTTCATACACGCTTTCAGT  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGC-AAGCACCAGTCATCACACCTACGGTCTTTCATACACGCTTTCAGT  998

seq1  TGTATTCATCCTCTCTGCAAGAACAAACAGCGCCCCCTCTCCCCTGTGGC  1050
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTATTCATCCTCTCTGCAAGAACAAACAGCGCCCCCTCT-CCCTGTGGC  1047

seq1  GTGTGGGTGGAACTGCAGCTTCTGACTTCGTACATATCAGCTGTACAGCA  1100
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGTGGGTGGAACTGCAGCTTCTGACTTCGTACATATCAGCTGTACAGC-  1096

seq1  ATCTCAGTCCACCCTAAT-CTCTATAAGGTTTCCAG-CCTCTTTTGTCTT  1148
      ||||||||||| |||||| |||||||| |||||||| ||||||||||| |
seq2  ATCTCAGTCCA-CCTAATCCTCTATAA-GTTTCCAGCCCTCTTTTGTCCT  1144

seq1  CTGGGAACTAATAGCCTTTTGTTTGAAGTCG  1179
      || ||||||||||||||||   |||||||||
seq2  CT-GGAACTAATAGCCTTT--GTTGAAGTCG  1172