BAC Information

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BAC

Clone NameB6Ng01-099F22
Chromosome7 (Build37)
Map Location 13,141,139 - 13,142,232
singlet/doubletsinglet
Overlap gene2900092C05Rik
Upstream geneLOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065, Zfp606
Downstream geneEG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099F22.b
ACCDH909182
length1,102
definitionDH909182|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F22, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccggcctgcctggatgtctcttatgatcttgctccaaaattctc
acaaacaaacagaaaaaaatacatattattaaaaaaaaatcaccatcctt
ataagtaacatttagtatttttttgaaatacctttatttttttctgattt
cccctaacccctttgtcttcatttctgaccttcatttactccaatcttag
taatataatttctatatttgagttattaaaacaaaaagaatggaaaactt
aagaagaaaatgaaggaagagcaaaatgtattgaagaccatcggagaact
ccagttataccaaaaaagtggagtcatgaaaaaatggagaaagatgaaaa
ctcaggaaagctgtgaaaacgaaagaaaggtgtaccatgtgctaaacaat
gtaaagaccaaactgaagagataacagacaactgagaacactcaccggac
ttctagagaacttgttcaagaatgttctacataaagaaacatgagaatca
tatagcagaaaataaattcatataatacccaaactcttgcttcttagcta
tgatagcccatgaatgactataacataagtgggatatagaaaacagccca
agttcattagccacaaaagacagattgttaggattttgttctctggctcc
agaccagaaagattgcttagtcctttggggaggggtggtcttcctgactg
tgatagcaaaatattttcatgaagcacaactttctaagtgatgtttctat
aagatctgggtcttttttctctccatttttatacatgaagacactgagaa
tatcataataaacatatgaccagattaagaggtggccatttctgtttgtt
ctcagatcaggtgacggaactttaacatacaggggagaagcgatacaatc
tgttctcatatgatactagcttttgggtagcccatacctgtgggagtatg
gtagagacagctgattattctgttgacctcctcagcacatgttcatcatg
gaagaagtgcatgtctgaggattcaggtaacgaattgtcaccgtagacat
caatcttgagtgtctttagaccattgacgagttttggtgttggttcccat
tc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13141139_13142232
seq2: B6Ng01-099F22.b_40_1141

seq1  GAATTCAGGGCCAGCCTGGAATGTATAGTATGATCTTGCTCCAAAATTCA  50
      ||||||  |||| |||||| |||| |  ||||||||||||||||||||| 
seq2  GAATTCCCGGCCTGCCTGG-ATGTCTCTTATGATCTTGCTCCAAAATTCT  49

seq1  AACAAACAAACAGAAAAAAATACATATTATTAAAAAAAAATCACCATCCT  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAAACAGAAAAAAATACATATTATTAAAAAAAAATCACCATCCT  99

seq1  TATAAGTAACATTTAGTATTTTTTTGAAATACCTTTATTTTTTTCTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTAACATTTAGTATTTTTTTGAAATACCTTTATTTTTTTCTGATT  149

seq1  TCCCCTAACCCCTTTGTCTTCATTTCTGACCTTCATTTACTCCAATCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTAACCCCTTTGTCTTCATTTCTGACCTTCATTTACTCCAATCTTA  199

seq1  GTAATATAATTTCTATATTTTAGTTATTAAAACAAAAAGAATGGAAAACT  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTAATATAATTTCTATATTTGAGTTATTAAAACAAAAAGAATGGAAAACT  249

seq1  TAAGAAGAAAATGAAGGAAGAGCAAAATGTATTGAAGACCATCAGAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAGAAGAAAATGAAGGAAGAGCAAAATGTATTGAAGACCATCGGAGAAC  299

seq1  TCCAGTTATACCAAAAAAGTGGAGTCATGAAAAAATGGAGAAAGATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTATACCAAAAAAGTGGAGTCATGAAAAAATGGAGAAAGATGAAA  349

seq1  ACTCAGGAAAGCTGTGAAAACAAAAGAAAGGTGTACCATGTGCTAGACAA  400
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  ACTCAGGAAAGCTGTGAAAACGAAAGAAAGGTGTACCATGTGCTAAACAA  399

seq1  TGTAGAGACCAAACTGAAGAGATAACAGACAACTGAGAACACAAACAGGA  450
      |||| |||||||||||||||||||||||||||||||||||||  || |||
seq2  TGTAAAGACCAAACTGAAGAGATAACAGACAACTGAGAACACTCACCGGA  449

seq1  CTTCTAGAGAACTTGTTCAAGAATGTTCTACATAAAGAAACATGAGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGAGAACTTGTTCAAGAATGTTCTACATAAAGAAACATGAGAATC  499

seq1  ATATAGCAGAAAATAAATTCATATAATACCAAAACTCTTGCTTCTTAGCT  550
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATATAGCAGAAAATAAATTCATATAATACCCAAACTCTTGCTTCTTAGCT  549

seq1  ATGATAGCCCATGAATGATTATAACATAAGTGGGATATAGAAAACAGCCC  600
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGATAGCCCATGAATGACTATAACATAAGTGGGATATAGAAAACAGCCC  599

seq1  AAGTTCATTAGCAACAAAAGACAGATTGTTAGGATTTTGTTCTCTGGCTC  650
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATTAGCCACAAAAGACAGATTGTTAGGATTTTGTTCTCTGGCTC  649

seq1  CAGACCAGAAAGATTGCTTAGTCCTTTGGGGAGGGGTGGTCTTCCTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGAAAGATTGCTTAGTCCTTTGGGGAGGGGTGGTCTTCCTGACT  699

seq1  GTGATAGCAAAATATTTTCATTAAGCAAAACTTTCTAAGTGATGTTTCTA  750
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  GTGATAGCAAAATATTTTCATGAAGCACAACTTTCTAAGTGATGTTTCTA  749

seq1  TAAGATCT-GGTCATTTTTCTCTCCATTTTTATACATGAAGACACTGAGA  799
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TAAGATCTGGGTCTTTTTTCTCTCCATTTTTATACATGAAGACACTGAGA  799

seq1  ATATCATAATAAACATAGGACCAGATTAAGAGGTGGCCATTTCTGTTGGT  849
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  ATATCATAATAAACATATGACCAGATTAAGAGGTGGCCATTTCTGTTTGT  849

seq1  TCTCAGTTCAGATGAGGGAAC-TTGACCTACAGGGGAGAAGCTATATAAT  898
      |||||| |||| ||| ||||| || || |||||||||||||| ||| |||
seq2  TCTCAGATCAGGTGACGGAACTTTAACATACAGGGGAGAAGCGATACAAT  899

seq1  CTGTTCACATATGCAATAAGC-TGTGTGTAGCCAATAGCTGTGGGAAGAT  947
      |||||| ||||||  |  ||| | || |||||| ||| ||||||||  ||
seq2  CTGTTCTCATATGATACTAGCTTTTGGGTAGCCCATACCTGTGGGAGTAT  949

seq1  GGAAGAGATAAGCTGTTTAGTCTTTTGACCT-CTCAACACAATGTCATCA  996
      || |||||  ||||| ||| ||| ||||||| |||| ||||   ||||||
seq2  GGTAGAGA-CAGCTGATTATTCTGTTGACCTCCTCAGCACATGTTCATCA  998

seq1  TGGACAAAGTTCATGT-TGAAGAATCAAGTAACAAAATGTCACC-TAAAA  1044
      ||||  |||| ||||| ||| || ||| ||||| || ||||||| || | 
seq2  TGGAAGAAGTGCATGTCTGAGGATTCAGGTAACGAATTGTCACCGTAGAC  1048

seq1  AAAAATCTT-AGTGT-TTAAGAGCATTGAC-AGTTTT-GTGTTGGTTCCC  1090
      |  |||||| ||||| || ||| ||||||| |||||| ||||||||||||
seq2  ATCAATCTTGAGTGTCTTTAGACCATTGACGAGTTTTGGTGTTGGTTCCC  1098

seq1  ATTC  1094
      ||||
seq2  ATTC  1102