BAC Information

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BAC

Clone NameB6Ng01-101F24
Chromosome7 (Build37)
Map Location 86,459,723 - 86,576,439
singlet/doubletdoublet
Overlap geneAbhd2, Rlbp1, BC025462
Upstream geneNtrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8
Downstream genePolg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101F24.bB6Ng01-101F24.g
ACCDH910577DH910578
length1,154208
definitionDH910577|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F24, 5' end.DH910578|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,575,282 - 86,576,439)(86,459,723 - 86,459,930)
sequence
gaattcactatcaccacacaggtaaggaacttcaaacattgctcggcaca
caacagagcctgaaaaaaatgctggctattattttcctctgtcctcttta
cttctggagtctgaagaatttggaaagcactgtcctatgccttcaaacat
ggcttttaattcttgttagaagtgtgaagatgcttgaaagatatcatttt
acagagggtcatgccaagacccagtgacaagtgtttcaggtagcaaaggc
cttccaaggatttcccctatctaagaccttaatttcaaacggatgttttt
tgttttttgtttccaaaagcatcaccatggagcaatggaggatggggctg
catcagttcacatctatctacaggaaaatgatgcactgggggcctagctt
agccctcccagtggagaatatatgttatagagctggtttaaaaaaaaaag
attctgataatgcttaatgaataaatattgatatttatttttatctgaat
tcatctcatcttgatgatcctttgaagtatttcattaatttaaaacattt
tttgagttgggtctggaggcacatacctttaatcccagcacttgggaggc
agagacacaaggatatctctgagttcaaggccagcctggtctatacaccg
ggtcccagggtacccagggatatatagagagcctacctcaaaagaaccaa
tcaaacaaaattttttctttgaaactggaaactccaaacctgaagtggtg
gtgtgtacttgaaaccccagagcttggaaggcagagtgaaaaatcagcaa
ctccatacagcttttattataaaatgcatttgagtcacagcctgggctat
atgagaccatgtctcaaggaccataaatatataaaataaacttgaattgg
tttcataaattatccttcggacttaaggagcagactgagaactcaggtaa
gagttagagggtggcagtgtgcagctgggattgatcactcatacaaatca
tcctaagagcacagcatctgatttccctacatgatcattaaaaatgtatt
ttatctgtgagaagagagtctgcctgattggactagccagcttgaaagtt
ccgtctaaggcattcgtaaacctaggagcactacagaactagcttgttct
ttct
tcgatgagttccagaggcagctgtgggtgccccaacagcatcctgcagac
acccagtgctagatgcccctgcttcctacccaaggcctttgagatacagc
agggggtaaattgaagatgaatttcttacttctgaggaaaatcacaatat
ttagctgttcctcaatgtgctttctggtacactgtgtgtgggggtggggc
ggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86575282_86576439
seq2: B6Ng01-101F24.b_46_1199 (reverse)

seq1  AGAAAGAACAAGCTTGTCTCTGTGTTGCTCCTAGGGTTTCTACGATGTCC  50
      |||||||||||||| || |||||  ||||||||||   | |||||   ||
seq2  AGAAAGAACAAGCTAGT-TCTGTAGTGCTCCTAGG---TTTACGAATGCC  46

seq1  TTCGACGGAACTCTC-AGCTGGCTAGTTCAATCATGCAGACTCTCTTCTC  99
      || ||||||||| || ||||||||||| |||||| |||||||||||||||
seq2  TTAGACGGAACTTTCAAGCTGGCTAGTCCAATCAGGCAGACTCTCTTCTC  96

seq1  ACAGGTAAAATACATTTTTATGGATCATGTAGGGAAATCAGATGCTGTGC  149
      |||| |||||||||||||||  ||||||||||||||||||||||||||||
seq2  ACAGATAAAATACATTTTTAATGATCATGTAGGGAAATCAGATGCTGTGC  146

seq1  TCTTTGGGTTGTTTTGTATGAGTGTTC-ATCCCAGCTGCCACACTGCCAC  198
      || || || || |||||||||||| || |||||||||| |||||||||||
seq2  TC-TTAGGATGATTTGTATGAGTGATCAATCCCAGCTG-CACACTGCCAC  194

seq1  CCTCTAACTCTTCCCTGAGTTCTCAGTCTGCTCCTTAAGTCCGAAGGATA  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTCTAACTCTTACCTGAGTTCTCAGTCTGCTCCTTAAGTCCGAAGGATA  244

seq1  CTTTATGGAACCATTTCAAGTTTATTTTATATATTTATGGTCCTTGAGAC  298
       |||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTTATGAAACCAATTCAAGTTTATTTTATATATTTATGGTCCTTGAGAC  294

seq1  ATGGTCTCATATAGCCCAGGCTGTGACTCAAATGCATTTTATAATAAAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTCATATAGCCCAGGCTGTGACTCAAATGCATTTTATAATAAAAG  344

seq1  CTGTATGGAGTTGCTGATTTTTCACTCTGCCTTCCAAGCTCTGGGGTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGAGTTGCTGATTTTTCACTCTGCCTTCCAAGCTCTGGGGTTTC  394

seq1  AAGTACACACCACCACTTCAGGTTTGGAGTTTCCAGTTTCAAAGAAAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACACCACCACTTCAGGTTTGGAGTTTCCAGTTTCAAAGAAAAAA  444

seq1  TTTTGTTTGATTGGTTCTTTTGAGGTAGGCTCTCTATATATCCCTGGGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGATTGGTTCTTTTGAGGTAGGCTCTCTATATATCCCTGGGTA  494

seq1  CCCTGGGACCCGGTGTATAGACCAGGCTGGCCTTGAACTCAGAGATATCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGACCCGGTGTATAGACCAGGCTGGCCTTGAACTCAGAGATATCC  544

seq1  TTGTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGTATGTGCCTCCAGAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGTATGTGCCTCCAGAC  594

seq1  CCAACTCAAAAAATGTTTTAAATTAATGAAATACTTCAAAGGATCATCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCAAAAAATGTTTTAAATTAATGAAATACTTCAAAGGATCATCAA  644

seq1  GATGAGATGAATTCAGATAAAAATAAATATCAATATTTATTCATTAAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGATGAATTCAGATAAAAATAAATATCAATATTTATTCATTAAGCA  694

seq1  TTATCAGAATCTTTTTTTTTTAAACCAGCTCTATAACATATATTCTCCAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGAATCTTTTTTTTTTAAACCAGCTCTATAACATATATTCTCCAC  744

seq1  TGGGAGGGCTAAGCTAGGCCCCCAGTGCATCATTTTCCTGTAGATAGATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGCTAAGCTAGGCCCCCAGTGCATCATTTTCCTGTAGATAGATG  794

seq1  TGAACTGATGCAGCCCCATCCTCCATTGCTCCATGGTGATGCTTTTGGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGATGCAGCCCCATCCTCCATTGCTCCATGGTGATGCTTTTGGAA  844

seq1  ACAAAAAACAAAAAACATCCGTTTGAAATTAAGGTCTTAGATAGGGGAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAACAAAAAACATCCGTTTGAAATTAAGGTCTTAGATAGGGGAAA  894

seq1  TCCTTGGAAGGCCTTTGCTACCTGAAACACTTGTCACTGGGTCTTGGCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGAAGGCCTTTGCTACCTGAAACACTTGTCACTGGGTCTTGGCAT  944

seq1  GACCCTCTGTAAAATGATATCTTTCAAGCATCTTCACACTTCTAACAAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCTGTAAAATGATATCTTTCAAGCATCTTCACACTTCTAACAAGA  994

seq1  ATTAAAAGCCATGTTTGAAGGCATAGGACAGTGCTTTCCAAATTCTTCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGCCATGTTTGAAGGCATAGGACAGTGCTTTCCAAATTCTTCAG  1044

seq1  ACTCCAGAAGTAAAGAGGACAGAGGAAAATAATAGCCAGCATTTTTTTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAAGTAAAGAGGACAGAGGAAAATAATAGCCAGCATTTTTTTCA  1094

seq1  GGCTCTGTTGTGTGCCGAGCAATGTTTGAAGTTCCTTACCTGTGTGGTGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTTGTGTGCCGAGCAATGTTTGAAGTTCCTTACCTGTGTGGTGA  1144

seq1  TAGTGAATTC  1158
      ||||||||||
seq2  TAGTGAATTC  1154

seq1: chr7_86459723_86459930
seq2: B6Ng01-101F24.g_77_284

seq1  TCGATGAGTTCCAGAGGCAGCTGTGGGTGCCCCAACAGCATCCTGCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGAGTTCCAGAGGCAGCTGTGGGTGCCCCAACAGCATCCTGCAGAC  50

seq1  ACCCAGTGCTAGATGCCCCTGCTTCCTACCCAAGGCCTTTGAGATACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTGCTAGATGCCCCTGCTTCCTACCCAAGGCCTTTGAGATACAGC  100

seq1  AGGGGGTAAATTGAAGATGAATTTCTTACTTCTGAGGAAAATCACAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTAAATTGAAGATGAATTTCTTACTTCTGAGGAAAATCACAATAT  150

seq1  TTAGCTGTTCCTCAATGTGCTTTCTGGTACACTGTGTGTGGGGGTGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGTTCCTCAATGTGCTTTCTGGTACACTGTGTGTGGGGGTGGGGC  200

seq1  GGTGGGGG  208
      ||||||||
seq2  GGTGGGGG  208