BAC Information

Click to search

BAC

Clone NameB6Ng01-101N13
Chromosome7 (Build37)
Map Location 7,273,017 - 7,274,192
singlet/doubletsinglet
Overlap geneV2r15
Upstream geneZfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2
Downstream geneLOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101N13.bB6Ng01-101N13.g
ACCDH910909DH910910
length1,0941,158
definitionDH910909|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N13, 5' end.DH910910|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgaacctgtttgtcgtatggaaaatttttctttatacttcaa
tcatggaagatagttttgctagacacaataatctaaatcatgggctttta
gaatttggagtacattgctctgagctcttctggctttcacaatttccact
gagaaatcagctgttctgatggcttttcctttatatgacttggtgtgttg
tctcatagctttcactagtctttctttgtactacatattaaatgttttaa
ctactaaatgtaatgggaaggttcttttcagggtgtgtccatttgatgtt
ctgtgtgttttctatctacatgactgtgtctttcctgagtttaggaaagt
ttctctatggtattgttgaaggtcttatttatgccattgactgggaattc
ctctctttcatctatgtctaaaattcaaagactggatcttctcatagtat
cccagagattctgcacatcccttcctcatgcttttaatttttttccataa
tctttttttgtttgtttgtttgtttgttttgtttttgttttcaaatcagg
gtttttctgtgtagcccttgctgtcctggaacttactctgtagtccaggc
tggcctcaaactcagaaatccacctacctctgcctcccaagtgctgggat
taatggtgtgcgccaccacgcccggcaccataatctttattagtggtcta
actattctacttcaagacttgatattctagctcctacttcatccattctc
tttataagactttccattgagctgtctagttgagttatctttaagactta
atattctgtcttctctttgatctgctctctgcataaggttttcaatagtc
tttctagttggttgctgggcttttcaatcctcattttttctgtcctcatt
tcagcttgagtgttctgtctctttgccgaattcagatttcaaatctgagt
tggggtatcactatgtagctctaactgttctggaaattagtatataaggt
cagggtggccttaacctctaagtgatggtgccaccacacctgaatatgaa
tatcctctcaagtcggtatctggggatttatctagttatgttca
gaattctacacaaacaccctgaaatagactgtccttttcaaagccagcca
aaacataaaaatctggtagtcaaacactgttggtaccttcttttatcact
gattaaccatagcataattaccaaatacaagggacagtaggaaaattttt
gtgactcacaaatgccctgttctcctacctcgaaattaatcttatataaa
ctgaatgtactcaggacaatgtgaaaatataatcacattgatatttgagc
ccaaatgagaccaactcattgattccacttgtctattcaatctattgtag
acaggatttcttgaggtttgtgggatgagaccaattctcagcgttgcttg
caaactaatcagagttaatacacctccacaactgctgataatcctggctt
gctcattcttttttctactttggatttttgtcaactctttatcattcact
ctgaaaattgttatttttggagctgtgctacttataaaatatttaggaag
cactacatggcaataaatgagtgttagatactcctcatatgtatctatgt
ggcgcaatgcatgaaaatataagtatcattaatcgcagtatactttaata
caagtttatataatattaaatatatgtatatatatatgtatacacacaca
cacacaaatttattattttttacctttgtgccttgaatagggcctgatat
gtagtacggctttttatggggaaaatttgcaatcatattcctaacattca
actggtataaaacagactaaagccaaaaaaaaaatcaaaaacaaaaaaat
caaaacaaaacaaaacaaaaaactatatttattatcaggctgtcatggaa
ctcattctgtagaccatgatggcctcaaaatcaaaatctgcctgcctttg
cctgccaagtgctgggattaaagtgtgtgccaccactgcccagctgcttt
tgacttaataaaagtagacatataaagcctttacaaaaaataaaaataaa
aataaaaaaaaactggctcttatttactgtggttattatattctagattg
aagattgaacctagatgtggttaggctaaagctacccatgaatttactcc
attttatttggattggcattgtggctttttcaattttaaatagaagatta
gtaattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7273017_7274192
seq2: B6Ng01-101N13.g_72_1229 (reverse)

seq1  TAAATTA--AATCTCCTATTTAAAAAATTGAAAAAAAGCCACAAATAGCA  48
      |||||||  ||||| ||||||  |||||||  ||||||||||||   || 
seq2  TAAATTACTAATCTTCTATTT--AAAATTG--AAAAAGCCACAA--TGC-  43

seq1  AAATCACAATAAAAATGGGAGTATAATTCATGGGTAGCTTTTAGCCTAA-  97
       ||||  |||||||   |||||| |||||||||||||| |||||||||| 
seq2  CAATCCAAATAAAA--TGGAGTA-AATTCATGGGTAGC-TTTAGCCTAAC  89

seq1  CACATACTAGGTTCAATCTTCAACTCTAAGAATATAATAAACAACAGTAA  147
      ||||| ||||||||||||||||| ||| |||||||||| ||| ||||| |
seq2  CACAT-CTAGGTTCAATCTTCAA-TCT-AGAATATAAT-AACCACAGT-A  134

seq1  AATAAGAGCAGGTTTTTTTTTTATTTTTTATTTTTATTTTTTTGTAAAGG  197
      |||||||||  ||||||||||   |||||||||||| |||||||||||||
seq2  AATAAGAGCCAGTTTTTTTTT--ATTTTTATTTTTA-TTTTTTGTAAAGG  181

seq1  CTTTATATGTCTTACTTTTATTAAGTCAAAGGCAGCTGGGCAGTGGTGGC  247
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  CTTTATATGTC-TACTTTTATTAAGTCAAAAGCAGCTGGGCAGTGGTGGC  230

seq1  ACACACCTTTAATCCCAGCACTTGGCAGGCAAAGGCAGGCAGATTTTTGA  297
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACACA-CTTTAATCCCAGCACTTGGCAGGCAAAGGCAGGCAGA-TTTTGA  278

seq1  TTTTGAGGCCATCATGGTCTACAGAATGAGTTCCATGACAGCCTGATAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGCCATCATGGTCTACAGAATGAGTTCCATGACAGCCTGATAAT  328

seq1  AAATATAGTTTTTTGTTTTGTTTTGTTTTGATTTTTTTGTTTTTGATTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGTTTTTTGTTTTGTTTTGTTTTGATTTTTTTGTTTTTGATTTT  378

seq1  TTTTTTGGCTTTAGTCTGTTTTATACCAGTTGAATGTTAGGAATATGATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGCTTTAGTCTGTTTTATACCAGTTGAATGTTAGGAATATGATT  428

seq1  GCAAATTTTCCCCAT-AAAAGCCGTACTACATATCAGGCCCTATTCAAGG  496
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCAAATTTTCCCCATAAAAAGCCGTACTACATATCAGGCCCTATTCAAGG  478

seq1  CACAAAGGTAAAAAATAATAAATTTGTGTGTGTGTGTGTATACATATATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGTAAAAAATAATAAATTTGTGTGTGTGTGTGTATACATATATA  528

seq1  TATACATATATTTAATATTATATAAACTTGTATTAAAGTATACTGCGATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATATTTAATATTATATAAACTTGTATTAAAGTATACTGCGATT  578

seq1  AATGATACTTATATTTTCATGCATTGCGCCACATAGATACATATGAGGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACTTATATTTTCATGCATTGCGCCACATAGATACATATGAGGAG  628

seq1  TATCTAACACTCATTTATTGCCATGTAGTGCTTCCTAAATATTTTATAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACACTCATTTATTGCCATGTAGTGCTTCCTAAATATTTTATAAG  678

seq1  TAGCACAGCTCCAAAAATAACAATTTTCAGAGTGAATGATAAAGAGTTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGCTCCAAAAATAACAATTTTCAGAGTGAATGATAAAGAGTTGA  728

seq1  CAAAAATCCAAAGTAGAAAAAAGAATGAGCAAGCCAGGATTATCAGCAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATCCAAAGTAGAAAAAAGAATGAGCAAGCCAGGATTATCAGCAGT  778

seq1  TGTGGAGGTGTATTAACTCTGATTAGTTTGCAAGCAACGCTGAGAATTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGTGTATTAACTCTGATTAGTTTGCAAGCAACGCTGAGAATTGG  828

seq1  TCTCATCCCACAAACCTCAAGAAATCCTGTCTACAATAGATTGAATAGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCCCACAAACCTCAAGAAATCCTGTCTACAATAGATTGAATAGAC  878

seq1  AAGTGGAATCAATGAGTTGGTCTCATTTGGGCTCAAATATCAATGTGATT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAATCAATGAGTTGGTCTCATTTGGGCTCAAATATCAATGTGATT  928

seq1  ATATTTTCACATTGTCCTGAGTACATTCAGTTTATATAAGATTAATTTCG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCACATTGTCCTGAGTACATTCAGTTTATATAAGATTAATTTCG  978

seq1  AGGTAGGAGAACAGGGCATTTGTGAGTCACAAAAATTTTCCTACTGTCCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAGAACAGGGCATTTGTGAGTCACAAAAATTTTCCTACTGTCCC  1028

seq1  TTGTATTTGGTAATTATGCTATGGTTAATCAGTGATAAAAGAAGGTACCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGGTAATTATGCTATGGTTAATCAGTGATAAAAGAAGGTACCA  1078

seq1  ACAGTGTTTGACTACCAGATTTTTATGTTTTGGCTGGCTTTGAAAAGGAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTTGACTACCAGATTTTTATGTTTTGGCTGGCTTTGAAAAGGAC  1128

seq1  AGTCTATTTCAGGGTGTTTGTGTAGAATTC  1176
      ||||||||||||||||||||||||||||||
seq2  AGTCTATTTCAGGGTGTTTGTGTAGAATTC  1158