BAC Information

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BAC

Clone NameB6Ng01-102A13
Chromosome7 (Build37)
Map Location 128,963,815 - 129,127,335
singlet/doubletdoublet
Overlap geneScnn1b, Cog7
Upstream geneEG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31, Scnn1g
Downstream geneGga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3, 4930413G21Rik, Rbbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102A13.bB6Ng01-102A13.g
ACCDH911041DH911042
length1,087815
definitionDH911041|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A13, 5' end.DH911042|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,963,815 - 128,964,903)(129,126,520 - 129,127,335)
sequence
gaattctgaggcagcaatgccgagtgtgggtggcttccgtctccacctga
ctcgggaggcagaccagcctgaagctgactaagtacaacacacaccaatc
aatgtcaggattttggcttctgccgatgactacagtaggtgcctcttctg
acctgagacctcaagaacgtgtgccacgggggacgactgagatgaatctt
gaactgatgtaaaggcataattcactaggtggggagcaaaagagtccagt
cagagaacactcgtaggcagacacccaccggcaggacgcagtcagcggcg
gtgacggagggtgaccaattgactcctctctgagtaggctcacagaaggc
tggaatgctgatctgatcgtaatggggattttgaaacagtgctgactcac
ctagcccaggggcgttgattaaaagcccagggtctgggagaggatgacac
gtgtctgcatgagcctatgtctgtgttcatgcgtccaggtgcccacagag
gctagaggcatgggatgcccatacagacagttgtgagatgtctaatgtgg
ctgctatgaattgaactctggtcctctggaagagcagcaagtgccaatga
cgcaatcccttgggttctattgaattctaaattttcttcctccctcttcc
tcacggaagacacttgtggctgtgttggatacacatggataatccagaat
aattctccctctcaagagcaattgattgtgtcccctctacagccttcatt
cttacaggtaacatgacaggcttctaaatccaagggattaggatctagat
acattgggggtgctgttattctgcctaccacgcaggccaattttagtaca
gcgtgggacatgaatgccacatggtgttcatcaccaggagtcaagtacaa
cacctccttctctatcctgagcttttaagttgataataactgtacatcct
gaaagacacccagcatgcagcctgggctctggcatgtcagtggcaaagga
gtctagtaggcttccttgtcatgtgccatggttggtcataatgatctagt
ccgtctactggttctgccactgggccgagaacagatt
gaattccacccgtgggttggtttgtttgttttttgagacagggtctcttt
atacagcccctggctgttctggaactcacattgaggaccagactagcctt
gaattccccttggcctgcctctgcctcctgagcattgaaaggtgtgtgcc
cagctaacaataatgagttggaaacttagtctttcagcagcaattggtgg
gacaactcagaagatgatcaaggacatatgttttgaaggacactaatgat
catctttactaaaatacatggaacacttattcaatgactgcatatatttc
tttcttttcttattctttttttttttttttttttttttttttttttaaaa
agggtttctctgtatagccctggctgtcctggaactcactttgtagacca
ggctggcctccaactcaaaaatccacctgcctctgcctgccgagtgctgg
gattaaaggggtgtggcacccccccccactatatatttcttttttgctgt
ttgggttgtttttgaaacaggggcttgctacctatgcctaaatgatttcc
aacttaaggaatcttcctctttctgcatccccagtgctgggattggaggc
gtgtattaccacatgaagtcagacaagtgaatttcttcctcccttctctg
cttcctcttctttatattgaaaattcatgtccaaagtgcggtgtttcata
aagacaatactaccaaaccgtactatgcattttacccctgttccctttgg
ataatcttccctccttcccacctccacctccattctttttcctcccgggc
tttcctctgctctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128963815_128964903
seq2: B6Ng01-102A13.b_49_1135

seq1  GAATTCTGAGGCAGCAATGCCGAGTGTGGGTGGCTTCCGTCTCCACCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGCAGCAATGCCGAGTGTGGGTGGCTTCCGTCTCCACCTGA  50

seq1  CTCGGGAGGCAGACCAGCCTGAAGCTGACTAAGTACAACACACACCAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAGGCAGACCAGCCTGAAGCTGACTAAGTACAACACACACCAATC  100

seq1  AATGTCAGGATTTTGGCTTCTGCCGATGACTACAGTAGGTGCCTCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGGATTTTGGCTTCTGCCGATGACTACAGTAGGTGCCTCTTCTG  150

seq1  ACCTGAGACCTCAAGAACGTGTGCCACGGGGGACGACTGAGATGAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGACCTCAAGAACGTGTGCCACGGGGGACGACTGAGATGAATCTT  200

seq1  GAACTGATGTAAAGGCATAATTCACTAGGTGGGGAGCAAAAGAGTCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGATGTAAAGGCATAATTCACTAGGTGGGGAGCAAAAGAGTCCAGT  250

seq1  CAGAGAACACTCGTAGGCAGACACCCACCGGCAGGACGCAGTCAGCGGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACACTCGTAGGCAGACACCCACCGGCAGGACGCAGTCAGCGGCG  300

seq1  GTGACGGAGGGTGACCAATTGACTCCTCTCTGAGTAGGCTCACAGAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGGAGGGTGACCAATTGACTCCTCTCTGAGTAGGCTCACAGAAGGC  350

seq1  TGGAATGCTGATCTGATCGTAATGGGGATTTTGAAACAGTGCTGACTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCTGATCTGATCGTAATGGGGATTTTGAAACAGTGCTGACTCAC  400

seq1  CTAGCCCAGGGGCGTTGATTAAAAGCCCAGGGTCTGGGAGAGGATGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCCAGGGGCGTTGATTAAAAGCCCAGGGTCTGGGAGAGGATGACAC  450

seq1  GTGTCTGCATGAGCCTATGTCTGTGTTCATGCGTCCAGGTGCCCACAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGCATGAGCCTATGTCTGTGTTCATGCGTCCAGGTGCCCACAGAG  500

seq1  GCTAGAGGCATGGGATGCCCATACAGACAGTTGTGAGATGTCTAATGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGGCATGGGATGCCCATACAGACAGTTGTGAGATGTCTAATGTGG  550

seq1  CTGCTATGAATTGAACTCTGGTCCTCTGGAAGAGCAGCAAGTGCCAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATGAATTGAACTCTGGTCCTCTGGAAGAGCAGCAAGTGCCAATGA  600

seq1  CGCAATCCCTTGGGTTCTATTGAATTCTAAATTTTCTTCCTCCCTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATCCCTTGGGTTCTATTGAATTCTAAATTTTCTTCCTCCCTCTTCC  650

seq1  TCACGGAAGACACTTGTGGCTGTGTTGGATACACATGGATAATCCAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGAAGACACTTGTGGCTGTGTTGGATACACATGGATAATCCAGAAT  700

seq1  AATTCTCCCTCTCAAGAGCAATTGATTGTGTCCCCTCTACAGCCTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCCTCTCAAGAGCAATTGATTGTGTCCCCTCTACAGCCTTCATT  750

seq1  CTTACAGGTAACATGACAGGCTTCTAAATCCAAGGGATTAGGATCTAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGGTAACATGACAGGCTTCTAAATCCAAGGGATTAGGATCTAGAT  800

seq1  ACATTGGGGGTGCTGTTATTCTGCCTACCACGCAGGCCAATTTTAGTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGGGGTGCTGTTATTCTGCCTACCACGCAGGCCAATTTTAGTACA  850

seq1  GCGTGGGACATGAATGCCACATGGTGTTCATCACCAGGAGTCAAGTACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGACATGAATGCCACATGGTGTTCATCACCAGGAGTCAAGTACAA  900

seq1  CACCTCCTTCTCTATCCTGAGCTTTTAAGTTGATAATAACTGTACATCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTTCTCTATCCTGAGCTTTTAAGTTGATAATAACTGTACATCCT  950

seq1  GAAAGACACCCAGCATGCAGCCTGGGCTCTGGCATGTCAGTGGCAAAGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAAGACACCCAGCATGCAGCCTGGGCTCTGGCATGTCAGTGGCAAA-GG  999

seq1  AGTCTAGTAGGCTTCCCTGTCATGTG-CATGGTCTGGTCATAATGATCTA  1049
      |||||||||||||||| ||||||||| |||||| ||||||||||||||||
seq2  AGTCTAGTAGGCTTCCTTGTCATGTGCCATGGT-TGGTCATAATGATCTA  1048

seq1  GTCCCGTCTACTGGTTCTGCACCTGGGCCAGAG-ACAGATT  1089
      || |||||||||||||||||  ||||||| ||| |||||||
seq2  GT-CCGTCTACTGGTTCTGCCACTGGGCC-GAGAACAGATT  1087

seq1: chr7_129126520_129127335
seq2: B6Ng01-102A13.g_67_881 (reverse)

seq1  TGAGAGCAGAGGAAAGACACGGGAGGAAAAAGAATGGAAGGTGGAGGTGG  50
      |||||||||||||||| | |||||||||||||||||| ||||||||||||
seq2  TGAGAGCAGAGGAAAG-CCCGGGAGGAAAAAGAATGG-AGGTGGAGGTGG  48

seq1  GAAAGAGGGAAGA-TATGCAGAAGGGAACAGGGGTAAAATGCATAGTACA  99
      ||| ||||||||| ||| || |||||||||||||||||||||||||||| 
seq2  GAAGGAGGGAAGATTATCCA-AAGGGAACAGGGGTAAAATGCATAGTACG  97

seq1  GTTAGGTAG-ATTGTCTTTATGAAACACAGCACTATGGACATGAATATTC  148
      ||| ||||| |||||||||||||||||| ||||| ||||||||||| |||
seq2  GTTTGGTAGTATTGTCTTTATGAAACACCGCACTTTGGACATGAATTTTC  147

seq1  AATATAAAGAAGAGGAAGCAGAGAAGGGAGGAAGAAAATCACATGTCTGA  198
      ||||||||||||||||||||||||||||||||||||| |||| |||||||
seq2  AATATAAAGAAGAGGAAGCAGAGAAGGGAGGAAGAAATTCACTTGTCTGA  197

seq1  CTTCATGTGGTGATACACGCCTGCAATCCCAGCACTGGGGATGCAGAAAG  248
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  CTTCATGTGGTAATACACGCCTCCAATCCCAGCACTGGGGATGCAGAAAG  247

seq1  AGGAAGATTCCTTAAGTTTGAAATCATTTAGGCATACGTAGCAAGACCCT  298
      |||||||||||||||||| ||||||||||||||||| |||||||| ||||
seq2  AGGAAGATTCCTTAAGTTGGAAATCATTTAGGCATAGGTAGCAAGCCCCT  297

seq1  GTCTCAAAAACAAACCAAACAGCAAAAAAGAAATATATAGTCGGGTGTGG  348
      || |||||||||| ||||||||||||||||||||||||||| ||| | ||
seq2  GTTTCAAAAACAACCCAAACAGCAAAAAAGAAATATATAGTGGGGGGGGG  347

seq1  TGCCACACGCCTTTAATCCCAGCACTCGGCAGGCAGAGGCAGGTGGATTT  398
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACACCCCTTTAATCCCAGCACTCGGCAGGCAGAGGCAGGTGGATTT  397

seq1  CTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGG  448
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTGGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGG  447

seq1  GCTATACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA  498
      |||||||||||||||||| | | |||||||||||||||||||||||||||
seq2  GCTATACAGAGAAACCCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA  497

seq1  AAAGAATAAGAAAAGAAAGAAATATATGCAGTCATTGAATAAGTGTTCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAAGAAAAGAAAGAAATATATGCAGTCATTGAATAAGTGTTCCA  547

seq1  TGTATTTTAGTAAAGATGATCATTAGTGTCCTTCAAAACATATGTCCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTAGTAAAGATGATCATTAGTGTCCTTCAAAACATATGTCCTTG  597

seq1  ATCATCTTCTGAGTTGTCCCACCAATTGCTGCTGAAAGACTAAGTTTCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTCTGAGTTGTCCCACCAATTGCTGCTGAAAGACTAAGTTTCCA  647

seq1  ACTCATTATTGTTAGCTGGGCACACACCTTTCAATGCTCAGGAGGCAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTATTGTTAGCTGGGCACACACCTTTCAATGCTCAGGAGGCAGAG  697

seq1  GCAGGCCAAGGGGAATTCAAGGCTAGTCTGGTCCTCAATGTGAGTTCCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCAAGGGGAATTCAAGGCTAGTCTGGTCCTCAATGTGAGTTCCAG  747

seq1  AACAGCCAGGGGCTGTATAAAGAGACCCTGTCTCAAAAAACAAACAAACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCAGGGGCTGTATAAAGAGACCCTGTCTCAAAAAACAAACAAACC  797

seq1  AACCCACGGGTGGAATTC  816
      ||||||||||||||||||
seq2  AACCCACGGGTGGAATTC  815