BAC Information

Click to search

BAC

Clone NameB6Ng01-102B20
Chromosome7 (Build37)
Map Location 126,929,901 - 127,038,249
singlet/doubletdoublet
Overlap geneExod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396
Upstream gene9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3
Downstream geneLyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B20.bB6Ng01-102B20.g
ACCDH911096DH911097
length1,1711,120
definitionDH911096|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B20, 5' end.DH911097|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,037,078 - 127,038,249)(126,929,901 - 126,931,042)
sequence
gaattccagagctcttccaaggcatcataagtggcttcatagcccaggaa
tcaaggtctctcgctctaaatactttatatgtgaggaatttacatgttgt
caactctttccaaaaatgatttgatgttaggctaattctggatttctgtg
tttctctccacccacacttcatgatgcacttcagagaacagaaaacccta
tattactgtttttgtttctacagttggacaatagctcttttatgcctgtc
tcgatttgtatgtcttacaatcagcttgatttttttatcttatttagccg
atgccttgtgtataggtggtcgtagaagagacagtgtgatatgtgcttat
gcttttagcaaaacacagtgcataatgggtatagaaatgtctgaaaaaaa
agaaagactgattggaaagaactctctcatattgtttaaaaaacaaacaa
acaaacaaacaccccatcatgagtaagtagtgcctcttctaggctgtcag
agattccagagtgaagtgttaatgaatcttgttttggtgttgatacattt
taaaagaagaaattctctgttaattatggaactgtcttttaagaaacttt
atgcgttaagaaagagtgcgagattttaggggtcctttgactagaaagtg
caaacgtgttgctctttaactgaatttgttgtgcagtatcactaggctta
tcatagcagatgttctgatggtgggaagagagtcccatcgcatttatcag
ggcccgataaaacagaagacttgacgccttgattgtacaagtaatgatgt
ttattacagaaatatagcagaagagttactgctagctgtctcactttaat
tcatttggaacctagtttgtcattcaatgacaagtccaaaattcattcaa
actgctattaaagtgctagccagtgtttcagacagttgagtgtacaaagg
tgaacacagcaaaaagggtcctctctcaaggagtttatcagagtgggagg
tgaggacagaaatgataaatcagcaaatctgattttgattgttcagcaat
ctgatcttgattgaatgctggagaaaattgagtgataaggctaggagtgg
tgtgccttggacgccattgagggagacctcctgcctttaacggactttac
gaaaagagccagccatgcaga
gaattcatctgggcattttcctctgcatttactgtactttggagctcctt
ttgatatatgctggggccctggatactcatgttgcaagtagctgcttctt
caacttgatctgtacccaaatttctggccaaaatcttgggattcttctta
gtgagaacctatgattccacagacaaatccattgctttaggaaccgtatt
tataatttcttgtgtagacattatatatgacaagaaaaggaaaaatgtca
ttggtgcataaatgactacacacatgaaatcaacattttaatgaacatga
ctactacccgaggacgcaaaatgacagaataaagtgacaagacaccacta
accttgttcaaggacctggtaattttcattaagcaaccatccctgatcat
tttccaagcaagaagagcagtgttccgagaatcatctaagcctgaggaaa
taaaagtatcaaacactgaatgccgtggtactaccataaagaaataatgg
aaaacagattattttaaatagaaattggggcgttctgttccttttatgac
cacctgctgattttaatcatcatgattggcctgtgaggagctatgaaagc
actatcacgggagagaatacggcttgcatttacacaggtgaaaacttgtc
agccagctcccagacacgtcaccagccatctatacagaccaacatttgtg
aaaaattagtcatgttcagttgtttttccacaagtttatcatattatcta
ggcacttgtatttctagttgatgtgctcagtattttcattatttacttat
ttatttttaaaccaactagaaaccactagatggtggtctttatctaaatt
caagaaactgggaaactcaaaattcagaattattgagttattaagaacat
ttttttttagcttaaaagctattaaaaataccttgtatctcctaatgaaa
ctaatatgaaatgttttacaaagttaaatgacttatataatgaaatatta
tcagttatacaaaccagatgtctcgtcctgaaatctatccactctgcaag
gcacactcagtccttgggtttcttataaaaagctattcaattaaaagaat
tattctaaaaatacatgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127037078_127038249
seq2: B6Ng01-102B20.b_43_1213 (reverse)

seq1  TCTGCATGGCTGGCTCCTTTTCGTTTAAAGTTCTGTTTAA-GCAGGAAGG  49
      ||||||||||||||| |||||||  ||||| || ||| || ||||| |||
seq2  TCTGCATGGCTGGCT-CTTTTCG--TAAAG-TCCGTTAAAGGCAGG-AGG  45

seq1  TCTCCCTCCATTGCGTTCCAGGCACA-CACT-CTAGCC-TATCACTCATT  96
      |||||||| || |||| | ||||||| |||| |||||| ||||||||| |
seq2  TCTCCCTCAATGGCGTCCAAGGCACACCACTCCTAGCCTTATCACTCAAT  95

seq1  TTTCTCCAGCATTCAATCAAGATCAGATTTGCTG-ACAATCAAAATCAGA  145
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  TTTCTCCAGCATTCAATCAAGATCAGA-TTGCTGAACAATCAAAATCAGA  144

seq1  TTTGCTGATTTATCATTTCTGTCCTCACCTCCCACTCTGATAAACTCCTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGATTTATCATTTCTGTCCTCACCTCCCACTCTGATAAACTCCTT  194

seq1  GAGAGAGGACCCTTTTTGCTTGTGTTCACCTTTGTACACTC-ACTGTCTG  244
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  GAGAGAGGACCCTTTTTGC-TGTGTTCACCTTTGTACACTCAACTGTCTG  243

seq1  AAACACTGGCTAGCACTTTAATAGCAGTTTGAATGAATTTTGGACTTGTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGGCTAGCACTTTAATAGCAGTTTGAATGAATTTTGGACTTGTC  293

seq1  ATTGAATGACAAACTAGGTTCCAAATGAATTAAAGTGAGACAGCTAGCAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGACAAACTAGGTTCCAAATGAATTAAAGTGAGACAGCTAGCAG  343

seq1  TAACTCTTCTGCTATATTTCTGTAATAAACATCATTACTTGTACAATCAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTTCTGCTATATTTCTGTAATAAACATCATTACTTGTACAATCAA  393

seq1  GGCGTCAAGTCTTCTGTTTTATCGGGCCCTGATAAATGCGATGGGACTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCAAGTCTTCTGTTTTATCGGGCCCTGATAAATGCGATGGGACTCT  443

seq1  CTTCCCACCATCAGAACATCTGCTATGATAAGCCTAGTGATACTGCACAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACCATCAGAACATCTGCTATGATAAGCCTAGTGATACTGCACAA  493

seq1  CAAATTCAGTTAAAGAGCAACACGTTTGCACTTTCTAGTCAAAGGACCCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCAGTTAAAGAGCAACACGTTTGCACTTTCTAGTCAAAGGACCCC  543

seq1  TAAAATCTCGCACTCTTTCTTAACGCATAAAGTTTCTTAAAAGACAGTTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTCGCACTCTTTCTTAACGCATAAAGTTTCTTAAAAGACAGTTC  593

seq1  CATAATTAACAGAGAATTTCTTCTTTTAAAATGTATCAACACCAAAACAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAACAGAGAATTTCTTCTTTTAAAATGTATCAACACCAAAACAA  643

seq1  GATTCATTAACACTTCACTCTGGAATCTCTGACAGCCTAGAAGAGGCACT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATTAACACTTCACTCTGGAATCTCTGACAGCCTAGAAGAGGCACT  693

seq1  ACTTACTCATGATGGGGTGTTTGTTTGTTTGTTTGTTTTTTAAACAATAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTCATGATGGGGTGTTTGTTTGTTTGTTTGTTTTTTAAACAATAT  743

seq1  GAGAGAGTTCTTTCCAATCAGTCTTTCTTTTTTTTCAGACATTTCTATAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTTCTTTCCAATCAGTCTTTCTTTTTTTTCAGACATTTCTATAC  793

seq1  CCATTATGCACTGTGTTTTGCTAAAAGCATAAGCACATATCACACTGTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATGCACTGTGTTTTGCTAAAAGCATAAGCACATATCACACTGTCT  843

seq1  CTTCTACGACCACCTATACACAAGGCATCGGCTAAATAAGATAAAAAAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACGACCACCTATACACAAGGCATCGGCTAAATAAGATAAAAAAAT  893

seq1  CAAGCTGATTGTAAGACATACAAATCGAGACAGGCATAAAAGAGCTATTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGATTGTAAGACATACAAATCGAGACAGGCATAAAAGAGCTATTG  943

seq1  TCCAACTGTAGAAACAAAAACAGTAATATAGGGTTTTCTGTTCTCTGAAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTGTAGAAACAAAAACAGTAATATAGGGTTTTCTGTTCTCTGAAG  993

seq1  TGCATCATGAAGTGTGGGTGGAGAGAAACACAGAAATCCAGAATTAGCCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATGAAGTGTGGGTGGAGAGAAACACAGAAATCCAGAATTAGCCT  1043

seq1  AACATCAAATCATTTTTGGAAAGAGTTGACAACATGTAAATTCCTCACAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAAATCATTTTTGGAAAGAGTTGACAACATGTAAATTCCTCACAT  1093

seq1  ATAAAGTATTTAGAGCGAGAGACCTTGATTCCTGGGCTATGAAGCCACTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATTTAGAGCGAGAGACCTTGATTCCTGGGCTATGAAGCCACTT  1143

seq1  ATGATGCCTTGGAAGAGCTCTGGAATTC  1172
      ||||||||||||||||||||||||||||
seq2  ATGATGCCTTGGAAGAGCTCTGGAATTC  1171

seq1: chr7_126929901_126931042
seq2: B6Ng01-102B20.g_65_1184

seq1  GAATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTT  50

seq1  TTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTT  100

seq1  CAACTTGATCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGATCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTCTTA  150

seq1  GTGAGAACCTATGATTCCACAGACAAATCCATTGCTTTAGGAACCGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAACCTATGATTCCACAGACAAATCCATTGCTTTAGGAACCGTATT  200

seq1  TATAATTTCTTGTGTAGACATTATATATGACAAGAAAAGGAAAAATGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTCTTGTGTAGACATTATATATGACAAGAAAAGGAAAAATGTCA  250

seq1  TTGGTGCATAAATGACTACACACATGAAATCAACATTTTAATGAACATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCATAAATGACTACACACATGAAATCAACATTTTAATGAACATGA  300

seq1  CTACTACCCGAGGACGCAAAATGACAGAATAAAGTGACAAGACACCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACCCGAGGACGCAAAATGACAGAATAAAGTGACAAGACACCACTA  350

seq1  ACCTTGTTCAAGGACCTGGTAATTTTCATTAAGCAACCATCCCTGATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTCAAGGACCTGGTAATTTTCATTAAGCAACCATCCCTGATCAT  400

seq1  TTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATCTAAGCCTGAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATCTAAGCCTGAGGAAA  450

seq1  TAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAAGAAATAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAAGAAATAATGG  500

seq1  AAAACAGATTATTTTAAATAGAAATTGGGGCGTTCTGTTCCTTTTATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGATTATTTTAAATAGAAATTGGGGCGTTCTGTTCCTTTTATGAC  550

seq1  CACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC  600

seq1  ACTATCACGGGAGAGAATACGGCTTGCATTTACACAGGTGAAAACTTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCACGGGAGAGAATACGGCTTGCATTTACACAGGTGAAAACTTGTC  650

seq1  AGCCAGCTCCCAGACACGTCACCAGCCATCTATACAGACCAACATTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTCCCAGACACGTCACCAGCCATCTATACAGACCAACATTTGTG  700

seq1  AAAAATTAGTCATGTTCAGTTGTTTTTCCACAAGTTTATCATATTATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAGTCATGTTCAGTTGTTTTTCCACAAGTTTATCATATTATCTA  750

seq1  GGCACTTGTATTTCTAGTTGATGTGCTCAGTATTTTCATTATTTACTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGTATTTCTAGTTGATGTGCTCAGTATTTTCATTATTTACTTAT  800

seq1  TTATTTTTAAACCAACTAG-AACCACTAGATGGTGGTCTTTATCTAAATT  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTATTTTTAAACCAACTAGAAACCACTAGATGGTGGTCTTTATCTAAATT  850

seq1  CAAGAAACT-GGAAACTCAAAATTCAGAAATTATTTGAGTTATTAAGAAC  898
      ||||||||| ||||||||||||||||| ||||| ||||||||||||||||
seq2  CAAGAAACTGGGAAACTCAAAATTCAG-AATTA-TTGAGTTATTAAGAAC  898

seq1  A-TTTTTTTTAGCTTAAAAGCTATTAAAAATACCTTGTATCTCCTAAATG  947
      | ||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTTTTTTTAGCTTAAAAGCTATTAAAAATACCTTGTATCTCCT-AATG  947

seq1  AAACTAATATGAAATGTTTTACAAAAGTTAAATGACTTATATAATGAAAT  997
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAACTAATATGAAATGTTTTAC-AAAGTTAAATGACTTATATAATGAAAT  996

seq1  AATTATCAGTTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTC  1047
       |||||||| ||||||||||||| ||| |||||||||||||  |||||  
seq2  -ATTATCAG-TTATACAAACCAG-ATG-TCTCGTCCTGAAA--TCTAT--  1038

seq1  CCACTTCCTGCAAGGCACCACTCAGTCCTTTGGGTTTTCTTTTATAAAAA  1097
      |||||  |||||||||| ||||||||||||  || |||||| |   ||||
seq2  CCACT--CTGCAAGGCA-CACTCAGTCCTT--GGGTTTCTTAT---AAAA  1080

seq1  AGCTAATCAAATAAAAAAAGATATATTTCTAAAAATACAATGACT  1142
      ||||| |||| ||||| |    ||  |||||||||||| ||||||
seq2  AGCTATTCAATTAAAAGA----ATTATTCTAAAAATAC-ATGACT  1120