BAC Information

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BAC

Clone NameB6Ng01-102G24
Chromosome7 (Build37)
Map Location 38,055,811 - 38,246,018
singlet/doubletdoublet
Overlap genenone
Upstream geneTshz3, LOC100043874
Downstream geneZfp536, LOC100043453, EG627844, C80913, Ccne1, 1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102G24.bB6Ng01-102G24.g
ACCDH911331DH911332
length5301,109
definitionDH911331|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G24, 5' end.DH911332|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,245,487 - 38,246,018)(38,055,811 - 38,056,915)
sequence
gaattcacaagcttcctgtgggtgtgacccctgtcctctgagggagcata
aataggtcggtaatttccagaaggttctgcaaactctgtgctttatacca
tcagcagccaggcaaaggaaatggacgaaagacccatagggatgggagag
ggcacctcgtggttccagggcatctcattggtgctgattctgccccctct
cctttcctccagttcccattctcccgtttctccatgccctacagctaccc
tgactcttgtgtccatccctcaaatacagtggacttccacagtatgtctg
atgctctataggcagcctgctttattcttctactcactgaagactcatca
gggaccccaagatgaaatgataaaaaagaccatgaaagatgtttttgttg
ggcaaaacaagaaagagcttattgactgcaaaccacaaacaaccatgggt
gctgggttcatacatccaagtctgtcctcctctccctcccctgtcatctt
ctcttcctcatcttcatcttcctcctcctc
gaattctttttgactaattccttaaaggacacatctattaaatcttacac
aagagtaaaaggaatatatcaatgggaccatatttatttatagagagtga
atcagtaaaacttccaaaaataactacagattaaagtggtctttctggtg
aattccacaaaagactgaaaagagaaatgatgccaaattccataaggtgg
gcgttagcccacattctaaaaggttagagctatctcccaaccagaatcta
acaaagaaatgataatcaaagccaagcacatgcctgtaatcccgaaccca
ggaaggcgaggcaggagaatgacaagctcaaagccaaccccaggctacat
agtgagaccctctttaaaaaacaaaaacaaaaaaagaaagataaaataca
tatcaatatctctcatgggcacagaggaaaaaaaatcctcacaaaaatat
tagcagatcacagacccaaaggtgatgtgtccagagagcacagaggagct
gaaaatgcacctttctcagtgggaggagactgtctgaaaaaaatgtcaca
ggcaacacttcagaaaaaaagaaagagtagaatttttaggaaggtcagag
tggccagggcttaggcaagggatagtgaaagggtgagtggaccatgactc
tattctgtatgataccatgatgtaatggtataagataacacatgacatca
cacacatggcagatcccaaagacctttacagcacaaggaatgacacctga
tagagcctggactgcactgactgataactgatgctgtcagtcaggacctg
agtttggtacccagcatccttgtggtggctcacaactgcctgtaatgcca
gtttcagcaatcgggtggctgcttctgacctccacaggcttcttgcacac
atgctacacatactctggcaggtatgcacacataaaaaatcaacagtaat
gagactttaataataaaggaacatgagaaaaaagcttgactggtgggcac
atgtctctaatctctgacctcaggaaaacaggaggcagatctttgaagta
taaaaccagttggttctgcagactttccaaagacagccgaggcttatagc
tgcctcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38245487_38246018
seq2: B6Ng01-102G24.b_48_577 (reverse)

seq1  GAGGAGGAGGAAGAAGAAGAAGAGGAAGAGGAAGAGGGACAGGGGAGGGA  50
      |||||||||||||| ||||| |||||||| |||||  |||||||||||||
seq2  GAGGAGGAGGAAGATGAAGATGAGGAAGA-GAAGA-TGACAGGGGAGGGA  48

seq1  GAGGAGGACAGACTTGGAGGTATGAACCCAGCACCCATGGTTGTCTGTGG  100
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  GAGGAGGACAGACTTGGATGTATGAACCCAGCACCCATGGTTGTTTGTGG  98

seq1  TTTGCAGTCAATAAGCTCTCTCCTGTTCTGCACAACAAAAACATCTCTCA  150
      ||||||||||||||||||| || |||| ||| |||||||||||||| |||
seq2  TTTGCAGTCAATAAGCTCTTTCTTGTTTTGCCCAACAAAAACATCTTTCA  148

seq1  TGGTCTCTTTTATCATTTCATCATGGGGTACCAGATGAGTCTTCAGTGAG  200
      |||||| ||||||||||||||| |||||| || |||||||||||||||||
seq2  TGGTCTTTTTTATCATTTCATCTTGGGGTCCCTGATGAGTCTTCAGTGAG  198

seq1  TAGAAGAATAAAGCAGGCTGCCTATAGAGCATCAGACATACTGTGGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATAAAGCAGGCTGCCTATAGAGCATCAGACATACTGTGGAAGT  248

seq1  CCACTGTATCTGAGGGATGGACACAAGAGTCAGGGTAGCTGTAGGGCATG  300
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTATTTGAGGGATGGACACAAGAGTCAGGGTAGCTGTAGGGCATG  298

seq1  GAGAAACGGGAGAATGGGAACTGGAGGAAAGGAGAGGGGGCAGAATCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACGGGAGAATGGGAACTGGAGGAAAGGAGAGGGGGCAGAATCAGC  348

seq1  ACCAATGAGATGCCCTGGAACCACGAGGTGCCCTATCCCATCCCTATGGG  400
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCAATGAGATGCCCTGGAACCACGAGGTGCCCTCTCCCATCCCTATGGG  398

seq1  TCTTTCGTCCATTTCCTCTGCTTGGCTGCTGATGGTATAAAGCACAGAGT  450
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  TCTTTCGTCCATTTCCTTTGCCTGGCTGCTGATGGTATAAAGCACAGAGT  448

seq1  TTGCAGAACCTTCTGGAAATTACTGACCTATTTATGCTCCCTCAGAGGAC  500
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTGCAGAACCTTCTGGAAATTACCGACCTATTTATGCTCCCTCAGAGGAC  498

seq1  AGGGGTCACACCCACACTTAGCTTGTGAATTC  532
      ||||||||||||||||   |||||||||||||
seq2  AGGGGTCACACCCACAGGAAGCTTGTGAATTC  530

seq1: chr7_38055811_38056915
seq2: B6Ng01-102G24.g_64_1172

seq1  GAATTCTTTTTGACTAATTCCTTAAAGGACACATCTATTAAATCTTACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGACTAATTCCTTAAAGGACACATCTATTAAATCTTACAC  50

seq1  AAGAGTAAAAGGAATATATCAATGGGACCATATTTATTTATAGAGAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAAAGGAATATATCAATGGGACCATATTTATTTATAGAGAGTGA  100

seq1  ATCAATAAAACTTCCAAAAATAACTACAGATTAAAGTGGTCTTTCTGGTG  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAAAACTTCCAAAAATAACTACAGATTAAAGTGGTCTTTCTGGTG  150

seq1  AATTCCACAAAAGACTGAAAAGAGAAATGATGCCAAATTCCAGAAGGTGG  200
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATTCCACAAAAGACTGAAAAGAGAAATGATGCCAAATTCCATAAGGTGG  200

seq1  GCGTTAGCCCACATTCTAAAAGGTTAGAGCTATCTCCCAACCAGAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTAGCCCACATTCTAAAAGGTTAGAGCTATCTCCCAACCAGAATCTA  250

seq1  ACAAAGAAATGATAATCAAAGCCAAGCACATGCCTGTAATCCCGAACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAATGATAATCAAAGCCAAGCACATGCCTGTAATCCCGAACCCA  300

seq1  GGAAGGCGAGGCAGGAGAATGACAAGCTCAAAGCCAACCCCAGGCTACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCGAGGCAGGAGAATGACAAGCTCAAAGCCAACCCCAGGCTACAT  350

seq1  AGTGAGACCCTCTTTAAAAAACAAAAACAAAAAAAGAAAGATAAAATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACCCTCTTTAAAAAACAAAAACAAAAAAAGAAAGATAAAATACA  400

seq1  TATCAATATCTCTCATGGGCACAGAGAAAAAAAAATCCTCACAAAAATAT  450
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATCAATATCTCTCATGGGCACAGAGGAAAAAAAATCCTCACAAAAATAT  450

seq1  TAGCAGATCACAGACCCAAAGGTGATGTGTCCAGAGAGCACAGAGGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATCACAGACCCAAAGGTGATGTGTCCAGAGAGCACAGAGGAGCT  500

seq1  GAAAATGCACCTTTCTCAGTGGGAGGAGACTGTCTGAAAAAAATGTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCACCTTTCTCAGTGGGAGGAGACTGTCTGAAAAAAATGTCACA  550

seq1  GGCAACACTTCAGAAAAAAAGAAAGAGTAGAATTTTTAGGAAGGTCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACACTTCAGAAAAAAAGAAAGAGTAGAATTTTTAGGAAGGTCAGAG  600

seq1  TGGCCAGGGCTTAGGCAAGGGATAGTGAAAGGGTGAGTGGACCATGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGGCTTAGGCAAGGGATAGTGAAAGGGTGAGTGGACCATGACTC  650

seq1  TATTCTGTATGATACCATGATGTAATGGTATAAGATAACACATGACATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTATGATACCATGATGTAATGGTATAAGATAACACATGACATCA  700

seq1  CACACATGGCAGATCCCAAAGACCTTTACAGCACAAGGAATGACACCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGGCAGATCCCAAAGACCTTTACAGCACAAGGAATGACACCTGA  750

seq1  TAGAGCCTGGACTGCACTGACTGATAACTGATGCTGTCAGTCAGGACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTGGACTGCACTGACTGATAACTGATGCTGTCAGTCAGGACCTG  800

seq1  AGTTTGGTACCCAGCATCCTTGTGGTGGCTCACAACTGCCTGTAATGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGTACCCAGCATCCTTGTGGTGGCTCACAACTGCCTGTAATGCCA  850

seq1  GTTTCAGGCAATCGGGTGGCTGCTTCTGACCTCCACAGGC-TCCTGCACA  899
      |||||| ||||||||||||||||||||||||||||||||| || ||||||
seq2  GTTTCA-GCAATCGGGTGGCTGCTTCTGACCTCCACAGGCTTCTTGCACA  899

seq1  CATGCTACACATACTCTGGCAGGTATGCACACAT-AAAAATCAACAGTAA  948
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  CATGCTACACATACTCTGGCAGGTATGCACACATAAAAAATCAACAGT-A  948

seq1  ATGAGACTTTAATAATAAAGGAACATGAGAAAAAAGCTTGACTGGT-GGC  997
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGAGACTTTAATAATAAAGGAACATGAGAAAAAAGCTTGACTGGTGGGC  998

seq1  ACATGTCTCTAATCTCAGACCTCAGGAAACAGGGAGGCAGATCTTTG-AG  1046
      |||||||||||||||| ||||||||||||   ||||||||||||||| ||
seq2  ACATGTCTCTAATCTCTGACCTCAGGAAAACAGGAGGCAGATCTTTGAAG  1048

seq1  TATGAGACCAGTTTGTTCTGCAGACTT--CCAAGACAGCC-AGGGCTATA  1093
      ||| | ||||||| |||||||||||||  | ||||||||| |||  ||||
seq2  TATAAAACCAGTTGGTTCTGCAGACTTTCCAAAGACAGCCGAGGCTTATA  1098

seq1  GCTGCCCTCAGA  1105
      |||| |||||||
seq2  GCTG-CCTCAGA  1109