BAC Information

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BAC

Clone NameB6Ng01-102M22
Chromosome7 (Build37)
Map Location 68,326,173 - 68,439,543
singlet/doubletdoublet
Overlap geneD0Kist2, LOC100041259, EG664943
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, LOC100041248
Downstream geneB230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102M22.bB6Ng01-102M22.g
ACCDH911593DH911594
length1,1281,075
definitionDH911593|Mus musculus domesticus DNA, BAC clone: B6Ng01-102M22, 5' end.DH911594|Mus musculus domesticus DNA, BAC clone: B6Ng01-102M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,326,173 - 68,327,315)(68,438,459 - 68,439,543)
sequence
gaattcagagaaagtgctgtataaaatatgcagagacattggcagaaatg
ctaataagactacatgacacactgcctcatctgatgagaatttatgtcaa
acttccagctttcagcagtgagttgtctggctcatgctattttgaataaa
ttatttatcaaactgtttctgttcttcacaatttgcttttcctttgttaa
tactaaaaccttagtattctgggatggtcagggggcataaatatagaaca
agaaaaattacctggattaaaaaataagttagttactaaaaccatcaata
gaatttatttaccttgatcccaggtgttgggagagaggcccaatcagtgc
acatgtagaatctcgacaaacaaaattgggaattttccctgatttttctc
tagtgataatatcatcctgagtaagtttgtaaaatgaaataatagccaaa
agaggttagaaacaccagaatcaaagaacctagtttaagcactagaaatt
ctgttatactttactgaagaatattaaacaataagtacagtaagtttgta
gattctagaatttgacactcttctcacagtttttatgtttatatacataa
aatcaggttaaggagaaatgtgtaagaaacagtaaagtaaatagaactaa
caagtcttgaaataggataaaaatcagcttattaagtttctgctttgctt
gttataatcaaatgtacaagataaatatttccatacttcacattgcctag
tgtctataactacaaggctctgattgggaagagagcaagatctctgctcc
ctgcttagctaaactttgtctaagattacaaatagataggataattgacc
ttataatatgatattttaaaaaggttttttttcattctcctttgcataat
tatgtcttagaattcttcagatgcaattagaatgatgtaattgttgaagt
agacgtgtaaataaaccttgtggctgtttggaaacattgcttcttctgag
ttaagacacagtgggggagcgtctcagcctcagcagcagcagtcgtcatc
ttgatctggactcagcagaacttaggatagtctgaacagtagaggggtgc
gccagaaacttgacgcttctggacgggc
gaattccaggacagccagagctatacagagaaaacctgtcttgaaccccc
cacactcacacacacacaaagaacttctactttaaagtatttgctgtctg
tacaagtctagattgatctaattttgaacacttgtacacatgattgttta
ataaaatgtaataggtgattttgaaattaagagaaaattcattttgaaac
ccagagaactgtagaactgtgagcaaatagcaacggcctgaatacaggca
taccatatttgaagtatggttgagaaaatttttttccattttttattagg
tatttagctcatttacatttccaatgctataccaaaagtccccatacccc
cccactcccctacccacccactccccctttttggccctggcattcccctg
tactggggcatataaagtttgcaagtccaatggggcctccctttgcagtg
atggctgactaatttgaaaggaccagtgatctgcatgtaattaatttgtg
ggataattttctatatcatgtacctggatacaagtttgatgatagaccat
gtatctcttatttctcaaaaggaactccaacctgtttttctgttatccat
acaggactaaaatacaaagatgtgaggagaaaaaaatactatctttcaac
tgataattcttttaatttcccagggatttctgcagatgactgtctttcac
agtccttttgtggaagccaaaatgctaatatctcgggagtttatctttgt
caacttatgaaagatcttggattctttacttattttatgcccccagaaaa
gagcattcagtgttacctgtttgtttttttttttttttttttgagagttc
atcttaatactcttaacagttatatgttcccaagtggtgtagaatatact
tttaaggaaattgtagtggagaacagtttccataaaagccataatctctc
ctaaagaaatatgttctggtccaactttgtgttggagtgtaataatccaa
taaatagccaattctttgctttgtaaatagcccagaggcctcattgtctc
agtgcaatttgtgaaatttattagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68326173_68327315
seq2: B6Ng01-102M22.b_47_1174

seq1  GAATTCAGAGAAAGTGCTGTATAAAATATGCAGAGACATTGGCAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAAAGTGCTGTATAAAATATGCAGAGACATTGGCAGAAATG  50

seq1  CTAATAAGACTACATGACACACTGCCTCATCTGATGAGAATTTATGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGACTACATGACACACTGCCTCATCTGATGAGAATTTATGTCAA  100

seq1  ACTTCCAGCTTTCAGCAGTGAGTTGTCTGGCTCATGCTATTTTGAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGCTTTCAGCAGTGAGTTGTCTGGCTCATGCTATTTTGAATAAA  150

seq1  TTATTTATCAAACTGTTTCTGTTCTTCACAATTTGCTTTTCCTTTGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATCAAACTGTTTCTGTTCTTCACAATTTGCTTTTCCTTTGTTAA  200

seq1  TACTAAAACCTTAGTATTCTGGGATGGTCAGGGGGCATAAATATAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAACCTTAGTATTCTGGGATGGTCAGGGGGCATAAATATAGAACA  250

seq1  AGAAAAATTACCTGGATTAAAAAATAAGTTAGTTACTAAAACCATCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTACCTGGATTAAAAAATAAGTTAGTTACTAAAACCATCAATA  300

seq1  GAATTTATTTACCTTGATCCCAGGTGTTGGGAGAGAGGCCCAATCAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATTTACCTTGATCCCAGGTGTTGGGAGAGAGGCCCAATCAGTGC  350

seq1  ACATGTAGAATCTCGACAAACAAAATTGGGAATTTTCCCTGATTTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAGAATCTCGACAAACAAAATTGGGAATTTTCCCTGATTTTTCTC  400

seq1  TAGTGATAATATCATCCTGAGTAAGTTTGTAAAATGAAATAATAGCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATAATATCATCCTGAGTAAGTTTGTAAAATGAAATAATAGCCAAA  450

seq1  AGAGGTTAGAAACACCAGAATCAAAGAACCTAGTTTAAGCACTAGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTAGAAACACCAGAATCAAAGAACCTAGTTTAAGCACTAGAAATT  500

seq1  CTGTTATACTTTACTGAAGAATATTAAACAATAAGTACAGTAAGTTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATACTTTACTGAAGAATATTAAACAATAAGTACAGTAAGTTTGTA  550

seq1  GATTCTAGAATTTGACACTCTTCTCACAGTTTTTATGTTTATATACATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGAATTTGACACTCTTCTCACAGTTTTTATGTTTATATACATAA  600

seq1  AATCAGGTTAAGGAGAAATGTGTAAGAAACAGTAAAGTAAATAGAACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGTTAAGGAGAAATGTGTAAGAAACAGTAAAGTAAATAGAACTAA  650

seq1  CAAGTCTTGAAATAGGATAAAAATCAGCTTATTAAGTTTCTGCTTTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTGAAATAGGATAAAAATCAGCTTATTAAGTTTCTGCTTTGCTT  700

seq1  GTTATAATCAAATGTACAAGATAAATATTTCCATACTTCACATTGCCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATCAAATGTACAAGATAAATATTTCCATACTTCACATTGCCTAG  750

seq1  TGTCTATAACTACAAGGCTCTGATTGGGAAGAGAGCAAGATCTCTGCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATAACTACAAGGCTCTGATTGGGAAGAGAGCAAGATCTCTGCTCC  800

seq1  CTGCTTAGCTAAACTTTGTCTAAGATTACAAAATAGATAGGATAATTGAC  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGCTTAGCTAAACTTTGTCTAAGATTAC-AAATAGATAGGATAATTGAC  849

seq1  CTTATAATATGATATTTTAAAAAGG-TTTTTTTCATTCTCC-TTGCATAA  898
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  CTTATAATATGATATTTTAAAAAGGTTTTTTTTCATTCTCCTTTGCATAA  899

seq1  TTATGTCTTAGAAATTCTTCAGAATGCAAATTAGAAATGATGTAATTGTT  948
      ||||||||||| |||||||||| |||| |||||| |||||||||||||||
seq2  TTATGTCTTAG-AATTCTTCAG-ATGC-AATTAG-AATGATGTAATTGTT  945

seq1  GAAGTAGGACGTGTAAATAAACCTTGTGGCTGTTTGGAAACATTGCTTCT  998
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTA-GACGTGTAAATAAACCTTGTGGCTGTTTGGAAACATTGCTTCT  994

seq1  TCTGAGTTAAGACACAGTGGGGGAGGCGGCCTCAGCCTCAGCAGCAGCAG  1048
      |||||||||||||||||||||||||   | ||||||||||||||||||||
seq2  TCTGAGTTAAGACACAGTGGGGGAG--CGTCTCAGCCTCAGCAGCAGCAG  1042

seq1  TCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGAAATTAGTCTGAAC  1098
      ||| ||||||| |  | ||||||||||||||||||||   ||||||||||
seq2  TCGTCATCTTGAT--CTGGACTCAGCAGAACTTAGGA---TAGTCTGAAC  1087

seq1  AGGTTAGA-GGGTGCGCCAGAGAACCTGACAGCTTCTGGGACGGGC  1143
      ||  |||| |||||||||||| ||| |||| |||||| ||||||||
seq2  AG--TAGAGGGGTGCGCCAGA-AACTTGAC-GCTTCT-GGACGGGC  1128

seq1: chr7_68438459_68439543
seq2: B6Ng01-102M22.g_69_1143 (reverse)

seq1  ACTAATTAAAAATTTCACCAAAATTTGCACTGAGGAACAAATGAGGCTCT  50
      ||||||   |||||||||   || ||||||||||  || ||||||||   
seq2  ACTAAT---AAATTTCAC---AAATTGCACTGAG--AC-AATGAGGCCTC  41

seq1  TGGGCTAATTTACAAAGCAAAGGAAATTGGCTATTTA-TGGATTATTACA  99
      |||||| |||||||||||||||  ||||||||||||| ||||||||||| 
seq2  TGGGCT-ATTTACAAAGCAAAG--AATTGGCTATTTATTGGATTATTAC-  87

seq1  ACTCCAACACAAAGTTGGACCAGAACATATTTCTTTAGGAGAGATTATGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACACAAAGTTGGACCAGAACATATTTCTTTAGGAGAGATTATGG  137

seq1  CTTTTTATGGAAACTG-TCTCCACTACAATTTCCTTAAAAGTATATTCTA  198
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  C-TTTTATGGAAACTGTTCTCCACTACAATTTCCTTAAAAGTATATTCTA  186

seq1  CACCACTTGGGAACATATAACTGTTAAGAGTATTAAGATGAACTCTC--A  246
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CACCACTTGGGAACATATAACTGTTAAGAGTATTAAGATGAACTCTCAAA  236

seq1  AAAAAAAAAAAAAAAACAAACAGGTAACACTGAATGCTCTTTTCTGGGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAACAAACAGGTAACACTGAATGCTCTTTTCTGGGGG  286

seq1  CATAAAATAAGTAAAGAATCCAAGATCTTTCATAAGTTGACAAAGATAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATAAGTAAAGAATCCAAGATCTTTCATAAGTTGACAAAGATAAA  336

seq1  CTCCCGAGATATTAGCATTTTGGCTTCCACAAAAGGACTGTGAAAGACAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGAGATATTAGCATTTTGGCTTCCACAAAAGGACTGTGAAAGACAG  386

seq1  TCATCTGCAGAAATCCCTGGGAAATTAAAAGAATTATCAGTTGAAAGATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGCAGAAATCCCTGGGAAATTAAAAGAATTATCAGTTGAAAGATA  436

seq1  GTATTTTTTTCTCCTCACATCTTTGTATTTTAGTCCTGTATGGATAACAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTTTCTCCTCACATCTTTGTATTTTAGTCCTGTATGGATAACAG  486

seq1  AAAAACAGGTTGGAGTTCCTTTTGAGAAATAAGAGATACATGGTCTATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGGTTGGAGTTCCTTTTGAGAAATAAGAGATACATGGTCTATCA  536

seq1  TCAAACTTGTATCCAGGTACATGATATAGAAAATTATCCCACAAATTAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTGTATCCAGGTACATGATATAGAAAATTATCCCACAAATTAAT  586

seq1  TACATGCAGATCACTGGTCCTTTCAAATTAGTCAGCCATCACTGCAAAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCAGATCACTGGTCCTTTCAAATTAGTCAGCCATCACTGCAAAGG  636

seq1  GAGGCCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATGC  686

seq1  CAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGGGGGTATGGGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGGGGGTATGGGG  736

seq1  ACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAA  786

seq1  ATGGAAAAAAATTTTCTCAACCATACTTCAAATATGGTATGCCTGTATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAAAATTTTCTCAACCATACTTCAAATATGGTATGCCTGTATTC  836

seq1  AGGCCGTTGCTATTTGCTCACAGTTCTACAGTTCTCTGGGTTTCAAAATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGTTGCTATTTGCTCACAGTTCTACAGTTCTCTGGGTTTCAAAATG  886

seq1  AATTTTCTCTTAATTTCAAAATCACCTATTACATTTTATTAAACAATCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCTTAATTTCAAAATCACCTATTACATTTTATTAAACAATCAT  936

seq1  GTGTACAAGTGTTCAAAATTAGATCAATCTAGACTTGTACAGACAGCAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAAGTGTTCAAAATTAGATCAATCTAGACTTGTACAGACAGCAAA  986

seq1  TACTTTAAAGTAGAAGTTCTTTGTGTGTGTGTGAGTGTGGGGGGTTCAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAAGTAGAAGTTCTTTGTGTGTGTGTGAGTGTGGGGGGTTCAAG  1036

seq1  ACAGGTTTTCTCTGTATAGCTCTGGCTGTCCTGGAATTC  1085
      |||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTTCTCTGTATAGCTCTGGCTGTCCTGGAATTC  1075