BAC Information

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BAC

Clone NameB6Ng01-103A01
Chromosome7 (Build37)
Map Location 133,704,727 - 133,868,551
singlet/doubletdoublet
Overlap geneEif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1
Upstream geneIl4ra, Il21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l
Downstream geneLOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103A01.bB6Ng01-103A01.g
ACCDH911729DH911730
length1,088980
definitionDH911729|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A01, 5' end.DH911730|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,704,727 - 133,705,823)(133,867,982 - 133,868,551)
sequence
gaattccagtctcggggaatccaaaaccaccttttggcttgcagggacat
ggcacaaatgtggtgcaaagccatgtatggaaacaaaataatatgattag
taaactttaaagttaaagatagagctggagagatggctcagtggttaaga
gcactgactgctcttccagaggtactgagtttaattcccaacaaccacat
ggtggctcacaaccatccataacaaaatctgatgccctcttctcgtgtgt
ctaaagacagcaacagtatactcacatatataaaataaataaatcttttt
taaaaaaaaagttgaagaacattaaatatgtctatttctgtaaaacttct
cagtagtaaaagtctgtaaacccagccaggcatggtggctcacgccttta
accccagcactcaggaggcagaggcaggcggatttcagagttcgaggcca
acctggtctacaaagtgagctccaggacagtcagggactatacagaaaaa
ccctgtcttgaaaaaccaaaaaaaaaaaaaaaaaaaaaagtctgtaaacc
ctccaaagagacatagcagacgatgtttgagcaaactctgatcagtcttg
tctctctgaagcacgtgatgaaaaatgtttctgaacaaaatgcctaccaa
cgctctttagcttatatctagccctttctaatgtcgaggaatttactgtt
ccctgtagcaatgcaattcaaacttctaaaaccagcagagcatcccaatg
agcaccaaccatgcagtgtattcctttaaaggcattattctttctcattg
agctcttccccgcctatcttccctagcccaaccagctaagactggtcaca
gagcaacctctgaccactgcagttaagtttacaaaggcttgctgcactgc
acgtaccatgcaccaagaagcagatttatcaggaagggcaaacacaatag
ctagcagctatcactgagtgccctccacatgccagtcctatactgaactg
gttccctacgctactggaacagctctctgggtggtaatgccctgtcattt
cagatgcagacctaagactgaagaaatgcttgctgact
gaattctcaaaagaggaaactccatggctgagaaacatttaaagaacctt
tcaacatccttagtcatcagggaaatgtaaatcaaaactactttgtggtt
ttatcttacacccagcagattggctaagatcaataaaaacaaatgctggc
gaggatgggaagttaggggaacaatcacccattgctggtatgagtgcaaa
cttgccagccactgtagagatcagtgtggtggtttctcaggaagatgaga
cttgaagacctcgtgactcagctataccactgtagtggtttgtatatgct
cggctatggggcatatacccaaaggatgctccattctacctcagagacac
ttgctcacccatgttcattgctgctctttataatagccagaagttggaaa
acaacttagatggctgtcacagatcaatggatgagaaaatgtggtacatt
tacacaacagaatattattcagccatttaaaaactgaaataatgaaattt
gcaggcaaatggaaggaactaggaaaaaaaaaatcaccctgagtcagata
acgtagacccagaaagacaaataagtaatgtattagcttacgtgtcaata
ttagctgttaagtcaatgataactgagccacaatctatataataccacaa
tagttaggtatagagtaagggactggagtgtacagatagatctccccagg
aaagggaaatagaatagatagttatgaatggatggggaaggagactagaa
cagaagactccaatggaatggggaaggaaagagggagggagggaatatga
agagagacagatataaggtatctttttttttttttttaactaaaagcctg
atgattttatttttatcatttctcaatataagtgaaaactgtactttttt
gtattacttctccctccaaaaaatatcctgtaggatgggacgtttctttt
tctgcatccagacacactctaggtcagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133704727_133705823
seq2: B6Ng01-103A01.b_45_1132

seq1  GAATTCCAGTCTCGGGGAATCCAAAACCACCTTTTGGCTTGCAGGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCTCGGGGAATCCAAAACCACCTTTTGGCTTGCAGGGACAT  50

seq1  GGCACAAATGTGGTGCAAAGCCATGTATGGAAACAAAATAATATGATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAATGTGGTGCAAAGCCATGTATGGAAACAAAATAATATGATTAG  100

seq1  TAAACTTTAAAGTTAAAGATAGAGCTGGAGAGATGGCTCAGTGGTTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTAAAGTTAAAGATAGAGCTGGAGAGATGGCTCAGTGGTTAAGA  150

seq1  GCACTGACTGCTCTTCCAGAGGTACTGAGTTTAATTCCCAACAACCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGACTGCTCTTCCAGAGGTACTGAGTTTAATTCCCAACAACCACAT  200

seq1  GGTGGCTCACAACCATCCATAACAAAATCTGATGCCCTCTTCTCGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAACCATCCATAACAAAATCTGATGCCCTCTTCTCGTGTGT  250

seq1  CTAAAGACAGCAACAGTATACTCACATATATAAAATAAATAAATCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGACAGCAACAGTATACTCACATATATAAAATAAATAAATCTTTTT  300

seq1  TAAAAAAAAAGTTGAAGAACATTAAATATGTCTATTTCTGTAAAACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAGTTGAAGAACATTAAATATGTCTATTTCTGTAAAACTTCT  350

seq1  CAGTAGTAAAAGTCTGTAAACCCAGCCAGGCATGGTGGCTCACGCCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAAAAGTCTGTAAACCCAGCCAGGCATGGTGGCTCACGCCTTTA  400

seq1  ACCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCAGAGTTCGAGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCAGAGTTCGAGGCCA  450

seq1  ACCTGGTCTACAAAGTGAGCTCCAGGACAGTCAGGGACTATACAGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTCTACAAAGTGAGCTCCAGGACAGTCAGGGACTATACAGAAAAA  500

seq1  CCCTGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAAAGTCTGTAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAAAGTCTGTAAACC  550

seq1  CTCCAAAGAGACATAGCAGACGATGTTTGAGCAAACTCTGATCAGTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAGAGACATAGCAGACGATGTTTGAGCAAACTCTGATCAGTCTTG  600

seq1  TCTCTCTGAAGCACGTGATGAAAAATGTTTCTGAACAAAATGCCTACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGAAGCACGTGATGAAAAATGTTTCTGAACAAAATGCCTACCAA  650

seq1  CGCTCTTTAGCTTATATCTAGCCCTTTCTAATGTCGAGGAATTTACTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTTTAGCTTATATCTAGCCCTTTCTAATGTCGAGGAATTTACTGTT  700

seq1  CCCTGTAGCAATGCAATTCAAACTTCTAAAACCAGCAGAGCATCCCAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAGCAATGCAATTCAAACTTCTAAAACCAGCAGAGCATCCCAATG  750

seq1  AGCACCAACCATGCAGTGTATTCCTTTAAAGGCATTATTCTTTCTCATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAACCATGCAGTGTATTCCTTTAAAGGCATTATTCTTTCTCATTG  800

seq1  AGCTCTTCCCCGCCTATCTTCCCTAGCCCAACCAGCTAAGACTGGTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCCCCGCCTATCTTCCCTAGCCCAACCAGCTAAGACTGGTCACA  850

seq1  GAGCAACCTCTGACCACTGCAGTTAAGTTTACAAAGGCTTGCTGCACTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACCTCTGACCACTGCAGTTAAGTTTACAAAGGCTTGCTGCACTGC  900

seq1  ACGTACCATGCACCAAGAAGCAAGATTATCAGGAAGGGCAAACACAATAG  950
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  ACGTACCATGCACCAAGAAGCAGATTTATCAGGAAGGGCAAACACAATAG  950

seq1  CTAGCAGCTATCACTGAGTGCCCTCCACATGCCAGTCCTATACTGAACTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGCTATCACTGAGTGCCCTCCACATGCCAGTCCTATACTGAACTG  1000

seq1  GTTCCCTACGCTACCTGGAACAGCTCTCCTGGGTGGTAATGCCCCTGTCC  1050
      ||||||||||||| ||||||||||||| ||||||||||||| |||||| |
seq2  GTTCCCTACGCTA-CTGGAACAGCTCT-CTGGGTGGTAATG-CCCTGT-C  1046

seq1  ATTTCAGATGCAAGAACCTAAAGACTGAAAGACATGGCTTGCTGACT  1097
      ||||||||||||   |||| ||||||| |||| || |||||||||||
seq2  ATTTCAGATGCA--GACCT-AAGACTG-AAGAAAT-GCTTGCTGACT  1088

seq1: chr7_133867982_133868551
seq2: B6Ng01-103A01.g_482_1048 (reverse)

seq1  GTGCTGAGCCTGAGTGTGTACTAGATGCATGAAAAGGAAACGTCCCTTCC  50
      ||||||| |  |||||||| || |||||| ||||| |||||||||| |||
seq2  GTGCTGACCTAGAGTGTGT-CTGGATGCA-GAAAAAGAAACGTCCCATCC  48

seq1  TAACAGGATATTTTTTGGAGGGAGAAGTAATACAAAAAAGTACAGTTTTC  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-ACAGGATATTTTTTGGAGGGAGAAGTAATACAAAAAAGTACAGTTTTC  97

seq1  ACTTATATTGTGAAATG-TGAAAATAAAATCATCAGGTCTTTTAGTT-AA  148
      |||||||||| |||||| | ||||||||||||||||| ||||||||| ||
seq2  ACTTATATTGAGAAATGATAAAAATAAAATCATCAGG-CTTTTAGTTAAA  146

seq1  AAAAAAAAAAAAGATACCTTTATATCTGTCTCTCTTCATATTCCCTCCCT  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGATACC-TTATATCTGTCTCTCTTCATATTCCCTCCCT  195

seq1  CCCTCTTTCCTTCCCCATTCCATTGGAGTCTTCTGTTCTAGTCTCCTTCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTCCTTCCCCATTCCATTGGAGTCTTCTGTTCTAGTCTCCTTCC  245

seq1  CCATCCATTCATAACTATCTATTCTATTTCCCTTTCCTGGGGAGATCTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATTCATAACTATCTATTCTATTTCCCTTTCCTGGGGAGATCTAT  295

seq1  CTGTACACTCCAGTCCCTTACTCTATACCTAACTATTGTGGTATTATATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACTCCAGTCCCTTACTCTATACCTAACTATTGTGGTATTATATA  345

seq1  GATTGTGGCTCAGTTATCATTGACTTAACAGCTAATATTGACACGTAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGGCTCAGTTATCATTGACTTAACAGCTAATATTGACACGTAAGC  395

seq1  TAATACATTACTTATTTGTCTTTCTGGGTCTACGTTATCTGACTCAGGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATTACTTATTTGTCTTTCTGGGTCTACGTTATCTGACTCAGGGT  445

seq1  GATTTTTTTTTTCCTAGTTCCTTCCATTTGCCTGCAAATTTCATTATTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTTTCCTAGTTCCTTCCATTTGCCTGCAAATTTCATTATTTC  495

seq1  AGTTTTTAAATGGCTGAATAATATTCTGTTGTGTAAATGTACCACATTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTAAATGGCTGAATAATATTCTGTTGTGTAAATGTACCACATTTT  545

seq1  CTCATCCATTGATCTGTGACAG  570
      ||||||||||||||||||||||
seq2  CTCATCCATTGATCTGTGACAG  567