BAC Information

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BAC

Clone NameB6Ng01-103C24
Chromosome7 (Build37)
Map Location 79,048,081 - 79,208,779
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665535
Downstream geneMctp2, LOC100042873, LOC100042880, LOC233391, LOC665570, LOC100042029, EG384643
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103C24.bB6Ng01-103C24.g
ACCDH911859DH911860
length1,028596
definitionDH911859|Mus musculus domesticus DNA, BAC clone: B6Ng01-103C24, 5' end.DH911860|Mus musculus domesticus DNA, BAC clone: B6Ng01-103C24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,048,081 - 79,049,107)(79,208,184 - 79,208,779)
sequence
gaattcttattacactgcagcattgagagggcaaattgctgtgaattaaa
cttaaaaacaaaaggagaagtgacacaatgttagaagacacagcgcagtg
aaaggctgcagccaggatgcacattccatctctatgccagagagatcagg
taagagatcccaagcatcattgagggacactgagctggccatacccatag
cccccaacatcatcctaactacacatccaatgaaacctatttctcctatt
ttatctactttgtattctgtaaaagttatggcttgactctgctcaggatt
tttaacttagctttgctttttatttcatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
aaatatatatatatatatatataaggaaacccccaatttctcagaacacc
agaacccttggatgttgatggggcaaaaatctcatttttaaggtatttct
aacacacctttatcctattttggctgtaatttttttaaaaatgactcaag
atagtgtcattattaaaatactaggcgccttaactattagcattaggata
ttctttaattctgtgctctcggtgcatgttcctagcacaactgctccttc
acatggtctcagaacatttttccttccctaaatcctatatctaagatctg
taatagtagttgtcacattaagggggtagttcttggtagactgtaacttt
atttctttcaatcctttattttttaatgatgggttcttaaacgttttaac
ctcccttgtagcccaccacccaccagaggtagtggaaaagaaaggatacg
gggaagttggatctgtttaacaacaactcctgtcttgttgtctgggaaat
cagcagttcacaggttatcagcagcagctcaatccactcgcaacacttat
acacagcagtccagtcagttgagttgggatagcaacacagtgacatgacc
tgatagagatacccaggcctcagcctca
gaattccattctgactgagtatttgtattttatttatttatatgaccctg
gtgtcttttaaacaatcacattcaaactcattttaatacttggctacctg
agaaaaatttcatagcaaattcaagattagttacttttataaatttttaa
gtgattatttatactataatatctattgattaattttcccctttctcttt
atatgacagaggctttaaacagtttaaatgaacactttaaattttaatac
actttaaattttagctggataacacacacacacatattgaactgttataa
caaaacatttgttatagcaaatatatataatgaaaaatccattcttttgg
aaaattgtgggcacacaagtagtatcattagtataatccttctgtaaggc
ctgactctccatcttcagtcattctacagatgcaaatttatgccctatga
cccacatcttcttatctggctctccccactctgtacttggaatatcctgc
tgttactctctgttccttttctaaaaatttttgtttgacatataagtgtg
gcactgccaaattgtgcatgccagtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_79048081_79049107
seq2: B6Ng01-103C24.b_45_1072

seq1  GAATTCTTATTACACTGCAGCATTGAGAGGGCAAATTGCTGTGAATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTACACTGCAGCATTGAGAGGGCAAATTGCTGTGAATTAAA  50

seq1  CTTAAAAACAAAAGGAGAAGTGACACAATGTTAGAAGACACAGCGCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAACAAAAGGAGAAGTGACACAATGTTAGAAGACACAGCGCAGTG  100

seq1  AAAGGCTGCAGCCAGGATGCACATTCCATCTCTATGCCAGAGAGATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGCAGCCAGGATGCACATTCCATCTCTATGCCAGAGAGATCAGG  150

seq1  TAAGAGATCCCAAGCATCATTGAGGGACACTGAGCTGGCCATACCCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATCCCAAGCATCATTGAGGGACACTGAGCTGGCCATACCCATAG  200

seq1  CCCCCAACATCATCCTAACTACACATCCAATGAAACCTATTTCTCCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACATCATCCTAACTACACATCCAATGAAACCTATTTCTCCTATT  250

seq1  TTATCTACTTTGTATTCTGTAAAAGTTATGGCTTGACTCTGCTCAGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTACTTTGTATTCTGTAAAAGTTATGGCTTGACTCTGCTCAGGATT  300

seq1  TTTAACTTAGCTTTGCTTTTTATTTCATATATATATATATATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTAGCTTTGCTTTTTATTTCATATATATATATATATATATATAT  350

seq1  ATATATATATATATATATATATATATATATATATATATATGCTTGTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||   | | |||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  400

seq1  AACAAAGTTTCAACTCTGCCTCT-AGGAAACCCCCAATTTCTCAGAACAC  449
      || | |  |  |  | |   | | ||||||||||||||||||||||||||
seq2  AA-ATATATATATATATATATATAAGGAAACCCCCAATTTCTCAGAACAC  449

seq1  CAGAACCCTTGGATGTTGATGGGGCAAAAATCTCATTTTTAAAGGTATTT  499
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGAACCCTTGGATGTTGATGGGGCAAAAATCTCATTTTT-AAGGTATTT  498

seq1  CTAACACACCTTTATCCTATTTTGGCTGCAATTTTTTTAAAAATGACTCA  549
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTAACACACCTTTATCCTATTTTGGCTGTAATTTTTTTAAAAATGACTCA  548

seq1  AGATAGTGTCATTATTAAAATACTAGGTGCCTTAACTATTAGCATTAGGA  599
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGATAGTGTCATTATTAAAATACTAGGCGCCTTAACTATTAGCATTAGGA  598

seq1  TATTCTTTAATTCTGTGCTCTCGGTGCATGTTCCTAGCACAACTGCTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTAATTCTGTGCTCTCGGTGCATGTTCCTAGCACAACTGCTCCT  648

seq1  TCACATGGTCTCAGAACATTTTTCCTTCCCTAAATCCTATATCTAAGATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGGTCTCAGAACATTTTTCCTTCCCTAAATCCTATATCTAAGATC  698

seq1  TGTAATAGTAGTTGTCACATTAA-GGGGTAGTTCTTGGTAGACTGTAACT  748
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTAATAGTAGTTGTCACATTAAGGGGGTAGTTCTTGGTAGACTGTAACT  748

seq1  TTATTTCTTTCAATCCTT--ATTTTTAATGAT-GGTTCTTAAACGTTTTA  795
      ||||||||||||||||||   ||||||||||| |||||||||||||||||
seq2  TTATTTCTTTCAATCCTTTATTTTTTAATGATGGGTTCTTAAACGTTTTA  798

seq1  ACCTCCCTTGTAGCCCACCACCCACCAGAGGTAGTGGAAAAGAAAGGATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCTTGTAGCCCACCACCCACCAGAGGTAGTGGAAAAGAAAGGATA  848

seq1  CAGGGGAAG-TGGACCTGTTTAGAAACAACTCCTGTC-TGTTGTCT-GGA  892
      | ||||||| |||| |||||||  ||||||||||||| |||||||| |||
seq2  C-GGGGAAGTTGGATCTGTTTAACAACAACTCCTGTCTTGTTGTCTGGGA  897

seq1  AATCAGCAGTTCACAGGTTATCAGCAGCAGCTCAATCCACTCGCAAACAC  942
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATCAGCAGTTCACAGGTTATCAGCAGCAGCTCAATCCACTCGC-AACAC  946

seq1  TTATACACCAGCAGTCCAGTTCAGTTGAGTTGGGATAGCAACAGCAGTGA  992
      ||||||| ||||||||||| ||||||||||||||||||||||| ||||||
seq2  TTATACA-CAGCAGTCCAG-TCAGTTGAGTTGGGATAGCAACA-CAGTGA  993

seq1  CATGACCTGATAGAGACACCCAGGCCTCAGCCTCA  1027
      |||||||||||||||| ||||||||||||||||||
seq2  CATGACCTGATAGAGATACCCAGGCCTCAGCCTCA  1028

seq1: chr7_79208184_79208779
seq2: B6Ng01-103C24.g_66_661 (reverse)

seq1  CACACACACACACACACACACACTGGCATGCACAATTTGGCAGTGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACTGGCATGCACAATTTGGCAGTGCCACA  50

seq1  CTTATATGTCAAACAAAAATTTTTAGAAAAGGAACAGAGAGTAACAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGTCAAACAAAAATTTTTAGAAAAGGAACAGAGAGTAACAGCAG  100

seq1  GATATTCCAAGTACAGAGTGGGGAGAGCCAGATAAGAAGATGTGGGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCCAAGTACAGAGTGGGGAGAGCCAGATAAGAAGATGTGGGTCAT  150

seq1  AGGGCATAAATTTGCATCTGTAGAATGACTGAAGATGGAGAGTCAGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATAAATTTGCATCTGTAGAATGACTGAAGATGGAGAGTCAGGCCT  200

seq1  TACAGAAGGATTATACTAATGATACTACTTGTGTGCCCACAATTTTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGGATTATACTAATGATACTACTTGTGTGCCCACAATTTTCCAA  250

seq1  AAGAATGGATTTTTCATTATATATATTTGCTATAACAAATGTTTTGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGATTTTTCATTATATATATTTGCTATAACAAATGTTTTGTTAT  300

seq1  AACAGTTCAATATGTGTGTGTGTGTTATCCAGCTAAAATTTAAAGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCAATATGTGTGTGTGTGTTATCCAGCTAAAATTTAAAGTGTAT  350

seq1  TAAAATTTAAAGTGTTCATTTAAACTGTTTAAAGCCTCTGTCATATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTAAAGTGTTCATTTAAACTGTTTAAAGCCTCTGTCATATAAAG  400

seq1  AGAAAGGGGAAAATTAATCAATAGATATTATAGTATAAATAATCACTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGGAAAATTAATCAATAGATATTATAGTATAAATAATCACTTAA  450

seq1  AAATTTATAAAAGTAACTAATCTTGAATTTGCTATGAAATTTTTCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATAAAAGTAACTAATCTTGAATTTGCTATGAAATTTTTCTCAGG  500

seq1  TAGCCAAGTATTAAAATGAGTTTGAATGTGATTGTTTAAAAGACACCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAAGTATTAAAATGAGTTTGAATGTGATTGTTTAAAAGACACCAGG  550

seq1  GTCATATAAATAAATAAAATACAAATACTCAGTCAGAATGGAATTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATAAATAAATAAAATACAAATACTCAGTCAGAATGGAATTC  596