BAC Information

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BAC

Clone NameB6Ng01-103K17
Chromosome7 (Build37)
Map Location 133,121,986 - 133,280,233
singlet/doubletdoublet
Overlap geneGsg1l, Xpo6
Upstream geneEG545999, LOC670828, 4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik
Downstream geneSbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103K17.bB6Ng01-103K17.g
ACCDH912189DH912190
length212687
definitionDH912189|Mus musculus domesticus DNA, BAC clone: B6Ng01-103K17, 5' end.DH912190|Mus musculus domesticus DNA, BAC clone: B6Ng01-103K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,280,022 - 133,280,233)(133,121,986 - 133,122,672)
sequence
tggctggctcctttaaatgctaggaaatttttctcattgataaacttaat
ttttcattaaagatatatttttatttgtgtgtgtgtgtgtgtgtgtgtga
gagagagagagagagagagagagagagagagaatatttaattgtatgcca
ttacaattacaattaattgtatgggtataggtacccatagaaactagaag
agggttcagatc
gaattccttggggaggatttgtggggagttgatggggatgggagccaggg
cctcctgcgttctaggcaagtgccctgagctgcacgccaggccaagagga
atttctaaggcagttgggcacgaatgggcccggtgttagagtggtgctgc
ctcagctggccactgctgcaacatcagctgcagcagcacaaacaacaact
atgctggacaggaatgagtttgcaaccagataagtgtacccatcccaccg
ccctgttcctaccagctaaatattttgacacttgttcctggccatgccca
tcctggcatgcaaataccactctgggatgctgacaagcctgtgccaccca
ggaacaggtgaccagttggctctttaatcactgatgatcctccattccca
aggggtttggaagagaattataactaaggaaggttctggaaacagcagac
cacacagaccttgatcagtgactaaaaaaaaaaaaaaaaaagttcaagct
gggaaggagagacaattgtggggaggggactcaggagtagagcatctgtc
acaaccacccctagaggatgtatgcatgcccatgtccatgggcaccccag
gaaatggagtgtgaggtcaagggaaataggtcatcatggccaggaaccct
gatgattccagctgtgtgtgtgtgtgtgtgcgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133280022_133280233
seq2: B6Ng01-103K17.b_53_264 (reverse)

seq1  GATCTGAACCCTCTTCTAGTTTCTATGGGTACCTATACCCATACAATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAACCCTCTTCTAGTTTCTATGGGTACCTATACCCATACAATTAA  50

seq1  TTGTAATTGTAATGGCATACAATTAAATATTCTCTCTCTCTCTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTGTAATGGCATACAATTAAATATTCTCTCTCTCTCTCTCTCTC  100

seq1  TCTCTCTCTCTCTCACACACACACACACACACACACAAATAAAAATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCACACACACACACACACACACACAAATAAAAATATAT  150

seq1  CTTTAATGAAAAATTAAGTTTATCAATGAGAAAAATTTCCTAGCATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGAAAAATTAAGTTTATCAATGAGAAAAATTTCCTAGCATTTAA  200

seq1  AGGAGCCAGCCA  212
      ||||||||||||
seq2  AGGAGCCAGCCA  212

seq1: chr7_133121986_133122672
seq2: B6Ng01-103K17.g_69_755

seq1  GAATTCCTTGGGGAGGATTTGTGGGGAGTTGATGGGGATGGGAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGGGAGGATTTGTGGGGAGTTGATGGGGATGGGAGCCAGGG  50

seq1  CCTCCTGCGTTCTAGGCAAGTGCCCTGAGCTGCACGCCAGGCCAAGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCGTTCTAGGCAAGTGCCCTGAGCTGCACGCCAGGCCAAGAGGA  100

seq1  ATTTCTAAGGCAGTTGGGCACGAATGGGCCCGGTGTTAGAGTGGTGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGGCAGTTGGGCACGAATGGGCCCGGTGTTAGAGTGGTGCTGC  150

seq1  CTCAGCTGGCCACTGCTGCAACATCAGCTGCAGCAGCACAAACAACAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGGCCACTGCTGCAACATCAGCTGCAGCAGCACAAACAACAACT  200

seq1  ATGCTGGACAGGAATGAGTTTGCAACCAGATAAGTGTACCCATCCCACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGACAGGAATGAGTTTGCAACCAGATAAGTGTACCCATCCCACCG  250

seq1  CCCTGTTCCTACCAGCTAAATATTTTGACACTTGTTCCTGGCCATGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCCTACCAGCTAAATATTTTGACACTTGTTCCTGGCCATGCCCA  300

seq1  TCCTGGCATGCAAATACCACTCTGGGATGCTGACAAGCCTGTGCCACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCATGCAAATACCACTCTGGGATGCTGACAAGCCTGTGCCACCCA  350

seq1  GGAACAGGTGACCAGTTGGCTCTTTAATCACTGATGATCCTCCATTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGTGACCAGTTGGCTCTTTAATCACTGATGATCCTCCATTCCCA  400

seq1  AGGGGTTTGGAAGAGAATTATAACTAAGGAAGGTTCTGGAAACAGCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTGGAAGAGAATTATAACTAAGGAAGGTTCTGGAAACAGCAGAC  450

seq1  CACACAGACCTTGATCAGTGACTAAAAAAAAAAAAAAAAAAGTTCAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACCTTGATCAGTGACTAAAAAAAAAAAAAAAAAAGTTCAAGCT  500

seq1  GGGAAGGAGAGACAATTGTGGGGAGGGGACTCAGGAGTAGAGCATCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAGAGACAATTGTGGGGAGGGGACTCAGGAGTAGAGCATCTGTC  550

seq1  ACAACCACCCCTAGAGGATGTATGCATGCCCATGTCCATGGGCACCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACCCCTAGAGGATGTATGCATGCCCATGTCCATGGGCACCCCAG  600

seq1  GAAATGGAGTGTGAGGTCAAGGGAAATAGGTCAGCAGGGCCAGGCAACCT  650
      ||||||||||||||||||||||||||||||||| || ||||||| | |||
seq2  GAAATGGAGTGTGAGGTCAAGGGAAATAGGTCATCATGGCCAGGAACCCT  650

seq1  GATGATTCCAGCTGTGTGTGTGTGTGTGTGTGTGTGT  687
      |||||||||||||||||||||||||||||| ||||||
seq2  GATGATTCCAGCTGTGTGTGTGTGTGTGTGCGTGTGT  687