BAC Information

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BAC

Clone NameB6Ng01-103M02
Chromosome7 (Build37)
Map Location 137,540,455 - 137,664,155
singlet/doubletdoublet
Overlap geneAte1
Upstream geneBrwd2, LOC100043150, Fgfr2, LOC546005
Downstream geneLOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103M02.bB6Ng01-103M02.g
ACCDH912248DH912249
length1,1681,114
definitionDH912248|Mus musculus domesticus DNA, BAC clone: B6Ng01-103M02, 5' end.DH912249|Mus musculus domesticus DNA, BAC clone: B6Ng01-103M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,540,455 - 137,541,633)(137,663,030 - 137,664,155)
sequence
gaattctaagccagtctgggatacacagcaagactcttcccaaaaaacac
aatccaaccaaacaaagatgcttagtgtacgagggtttcagatggtggat
tttggaatacctgtatacttgtaaagagacctgggaaaggaacccaagcc
aatgtgtgaatgaaactcactatgctttttatgcaccaaaaccagaccca
gaacatctcatacaatgtaagtgtggccatgacctaccacataaggtcgg
acatggaatttgtaactaagccacaaacattccaagcttcatcttcctca
gaagctgttgctctaaagcagcatcaaacccaggacaactcactgtggac
caatttcaggaaagagaagaacagtatgcctcagatggcagaaacagaga
atgtgcccacgtactgtctgtctgcccaacacacagagaggaagggagac
cacccaacctcagactcagactccagacctgcctacatgtctggaactga
gcatcactctgtctgtcaggcttcgtggcctgtggcagtttatgatcatc
ctcaagaaaggcacaattatttagtttctttaaaaatttacttatttaat
gtgttcaaatgttttgcctcaatgtatatgcaccacctgtgtgcctgcag
aagtcagaagaggatgtcaaatccccaggatctggagttatggatggttg
tgagccaccatgtgggtgctaggaaccaaactggggtatcctgtaagagc
aacaagtacttttaaccactgactcattgttccagccccaaacttatttt
agtacagcccatattgctaatactgaaaccttaaatctaaacaacaaaaa
tcctatgtaagatatttcaacactaaaactaaatttactaaaaggggaag
aatgtattcttaattttttcttaagacttgcttgttagttttatattgag
tacactgtagctgtcttcagaacacaccagaaagagggcatcagatccca
ttacagatgcttgtgaacaccatgtggttgctgggattgaactcagaact
ctgaagaagcagtcagtggctctacactgagcattttctcagcctatttt
tttaaaaaaaatcgttataaacatttgcaagggttgccgtattagataca
tcatgcctatgaacaaat
gaattcaccatattgtcgactatggaaattatgccagacagacttaaaca
tctgtgtacgcagaggagaaagctaaggaatattatcttggtaggagcat
gcctttatttttacactttgcctcacaacctcattccctaaaacacgttc
tttgcaaattggagacccatggagtgaattcagattatgtaaatgttcag
cctgaagagttaaaaattctttttgagtgatatttaaaactccctttaaa
agaggaaagtgtcgcttcgtcattggacattccgctctagcagagttgtt
tggattctagatccctctctatcaagccagctccggctcctcgttcctca
caggtggtcaggcgcagaactcgaggttaaccttcaactacagagcgcaa
atgaccgggtgaatcccaacctggagcctcagtttccctatctgtaaagc
gggctgagagatcgcgtcagtgacaaggactgctgttgactggacaagta
acctgctggccactaaacactgggttccgagacgcacccctgcaacccag
gctggcggccagtggcctgaccggggatcggcggagagccgcgaacccgg
caacccccgcgctctcggcccttccccgaggttccccgcgctgagaggcg
tggccgctcctcaagcccacagcggcggccatggcctcggtggtggaata
caagggcctgaaggccggctactactgcggctactgcgagtccagggagg
gcaagacgtcgtgtggtgagtgtcccgccgtccaggtcgcctttaccggc
ttcagccaggctctcgctacgtcctggcaggcctgccgcgcgggttgagg
ccgttggtcacccgactccagcttcccggtcccattggtctctcctcagc
cggcttcctttccatcccggtcttcccgccctcgccctccctaggggtag
ccgcccctcacagagaggacgaactagcggacgctgcccgcagtcacatg
gcgcgggcggcgtcagtgacgtagcgttccgtccttccagcccggagcac
tcgagtggctcggccgatcttcgagcccgcgcgttgcatttgtgggtggt
gaaagccaaggcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137540455_137541633
seq2: B6Ng01-103M02.b_45_1212

seq1  GAATTCTAAGCCAGTCTGGGATACACAGCAAGACTCTTCCCAAAAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCCAGTCTGGGATACACAGCAAGACTCTTCCCAAAAAACAC  50

seq1  AATCCAACCAAACAAAGATGCTTAGTGTACGAGGGTTTCAGATGGTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAACCAAACAAAGATGCTTAGTGTACGAGGGTTTCAGATGGTGGAT  100

seq1  TTTGGAATACCTGTATACTTGTAAAGAGACCTGGGAAAGGAACCCAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATACCTGTATACTTGTAAAGAGACCTGGGAAAGGAACCCAAGCC  150

seq1  AATGTGTGAATGAAACTCACTATGCTTTTTATGCACCAAAACCAGACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGAATGAAACTCACTATGCTTTTTATGCACCAAAACCAGACCCA  200

seq1  GAACATCTCATACAATGTAAGTGTGGCCATGACCTACCACATAAGGTCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCTCATACAATGTAAGTGTGGCCATGACCTACCACATAAGGTCGG  250

seq1  ACATGGAATTTGTAACTAAGCCACAAACATTCCAAGCTTCATCTTCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAATTTGTAACTAAGCCACAAACATTCCAAGCTTCATCTTCCTCA  300

seq1  GAAGCTGTTGCTCTAAAGCAGCATCAAACCCAGGACAACTCACTGTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGTTGCTCTAAAGCAGCATCAAACCCAGGACAACTCACTGTGGAC  350

seq1  CAATTTCAGGAAAGAGAAGAACAGTATGCCTCAGATGGCAGAAACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCAGGAAAGAGAAGAACAGTATGCCTCAGATGGCAGAAACAGAGA  400

seq1  ATGTGCCCACGTACTGTCTGTCTGCCCAACACACAGAGAGGAAGGGAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCCACGTACTGTCTGTCTGCCCAACACACAGAGAGGAAGGGAGAC  450

seq1  CACCCAACCTCAGACTCAGACTCCAGACCTGCCTACATGTCTGGAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAACCTCAGACTCAGACTCCAGACCTGCCTACATGTCTGGAACTGA  500

seq1  GCATCACTCTGTCTGTCAGGCTTCGTGGCCTGTGGCAGTTTATGATCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACTCTGTCTGTCAGGCTTCGTGGCCTGTGGCAGTTTATGATCATC  550

seq1  CTCAAGAAAGGCACAATTATTTAGTTTCTTTAAAAATTTACTTATTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAAGGCACAATTATTTAGTTTCTTTAAAAATTTACTTATTTAAT  600

seq1  GTGTTCAAATGTTTTGCCTCAATGTATATGCACCACCTGTGTGCCTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAAATGTTTTGCCTCAATGTATATGCACCACCTGTGTGCCTGCAG  650

seq1  AAGTCAGAAGAGGATGTCAAATCCCCAGGATCTGGAGTTATGGATGGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGAAGAGGATGTCAAATCCCCAGGATCTGGAGTTATGGATGGTTG  700

seq1  TGAGCCACCATGTGGGTGCTAGGAACCAAACTGGGGTATCCTGTAAGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGGTGCTAGGAACCAAACTGGGGTATCCTGTAAGAGC  750

seq1  AACAAGTACTTTTAACCACTGACTCATTGTTCCAGCCCCAAACTTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTACTTTTAACCACTGACTCATTGTTCCAGCCCCAAACTTATTTT  800

seq1  AGTACAGCCCATATTGCTAATACTGAAACCTTAAATCTAAACAACAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGCCCATATTGCTAATACTGAAACCTTAAATCTAAACAACAAAAA  850

seq1  TCCTATGTAAGATATTTCAAACACTAAAACTAAATTTACTAAAAGGGGAA  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCTATGTAAGATATTTC-AACACTAAAACTAAATTTACTAAAAGGGGAA  899

seq1  GAATGTA-TCTTAATTTTTTCTTAAGACTTGCTTGTTAGTTTTATA-TGA  948
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  GAATGTATTCTTAATTTTTTCTTAAGACTTGCTTGTTAGTTTTATATTGA  949

seq1  GTACACTGTAGCTGTCTTCAG-ACACACCAG-AAGAGGGCATCAGATCCC  996
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  GTACACTGTAGCTGTCTTCAGAACACACCAGAAAGAGGGCATCAGATCCC  999

seq1  ATTACAGATGCTTGTGAACCACCATGTGGTTGCTGGGAATTGAACTCAGA  1046
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  ATTACAGATGCTTGTGAA-CACCATGTGGTTGCTGGG-ATTGAACTCAGA  1047

seq1  ACCTCTGGAAGAGCAGTCAGT-GCTCTTAACCACTGAGCCATCTCTCCAG  1095
      | ||||| |  |||||||||| |||||    ||||||||  | ||| |||
seq2  A-CTCTGAAGAAGCAGTCAGTGGCTCT---ACACTGAGCATTTTCT-CAG  1092

seq1  CCCTAATTTTTTTTTAAAAAAAAATCCTTTTATAAACATTTTGCAGTGGT  1145
      ||     | |||||| ||||||||||   ||||||||| ||||||  |||
seq2  CC-----TATTTTTTTAAAAAAAATC--GTTATAAACA-TTTGCAAGGGT  1134

seq1  TGCCGTA-TAGATACATCAGTGCTTATGAACAAAT  1179
      ||||||| ||||||||||| ||| |||||||||||
seq2  TGCCGTATTAGATACATCA-TGCCTATGAACAAAT  1168

seq1: chr7_137663030_137664155
seq2: B6Ng01-103M02.g_69_1182 (reverse)

seq1  CCGCCTTCGCCTCCACCACCCCACAATGCAACGCGCGCGCCTCCGAAGAT  50
      ||||||| || | ||||||||   ||||||||||||| ||   |||||||
seq2  CCGCCTTGGCTTTCACCACCCACAAATGCAACGCGCGGGC--TCGAAGAT  48

seq1  CGCGCGAAGCCACTCGAGTGCTCCCGGGCTGGAAGGACCGGACGCCCTAC  100
      || ||  ||||||||||||||| ||||||||||||||| | |||  ||||
seq2  CG-GCCGAGCCACTCGAGTGCT-CCGGGCTGGAAGGACGGAACG--CTAC  94

seq1  GTCACTGACGCCGCCCGCGCCATGTTGACTGCGGGCAGCCGTCCGCTAGT  150
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  GTCACTGACGCCGCCCGCGCCATG-TGACTGCGGGCAG-CGTCCGCTAGT  142

seq1  TCCGTTCCTCCTCTGTGAGGGGCGGCTACCCCCTAGGGAGGGCGAGGGCG  200
      ||   |||| |||||||||||||||||| |||||||||||||||||||||
seq2  TC--GTCCT-CTCTGTGAGGGGCGGCTA-CCCCTAGGGAGGGCGAGGGCG  188

seq1  GGAAGACCGGGATGGAAAGGAAGCCGGCTGAGGAGAGACCAATGGGACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACCGGGATGGAAAGGAAGCCGGCTGAGGAGAGACCAATGGGACCG  238

seq1  GGAAGCTGGAGTCGGGTGACCAACGGCCTCAACCCGCGCGGCAGGCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGGAGTCGGGTGACCAACGGCCTCAACCCGCGCGGCAGGCCTGC  288

seq1  CAGGACGTAGCGAGAGCCTGGCTGAAGCCGGTAAAGGCGACCTGGACGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACGTAGCGAGAGCCTGGCTGAAGCCGGTAAAGGCGACCTGGACGGC  338

seq1  GGGACACTCACCACACGACGTCTTGCCCTCCCTGGACTCGCAGTAGCCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTCACCACACGACGTCTTGCCCTCCCTGGACTCGCAGTAGCCGC  388

seq1  AGTAGTAGCCGGCCTTCAGGCCCTTGTATTCCACCACCGAGGCCATGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGCCGGCCTTCAGGCCCTTGTATTCCACCACCGAGGCCATGGCC  438

seq1  GCCGCTGTGGGCTTGAGGAGCGGCCACGCCTCTCAGCGCGGGGAACCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTGTGGGCTTGAGGAGCGGCCACGCCTCTCAGCGCGGGGAACCTCG  488

seq1  GGGAAGGGCCGAGAGCGCGGGGGTTGCCGGGTTCGCGGCTCTCCGCCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGCCGAGAGCGCGGGGGTTGCCGGGTTCGCGGCTCTCCGCCGAT  538

seq1  CCCCGGTCAGGCCACTGGCCGCCAGCCTGGGTTGCAGGGGTGCGTCTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGTCAGGCCACTGGCCGCCAGCCTGGGTTGCAGGGGTGCGTCTCGG  588

seq1  AACCCAGTGTTTAGTGGCCAGCAGGTTACTTGTCCAGTCAACAGCAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTGTTTAGTGGCCAGCAGGTTACTTGTCCAGTCAACAGCAGTCC  638

seq1  TTGTCACTGACGCGATCTCTCAGCCCGCTTTACAGATAGGGAAACTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTGACGCGATCTCTCAGCCCGCTTTACAGATAGGGAAACTGAGG  688

seq1  CTCCAGGTTGGGATTCACCCGGTCATTTGCGCTCTGTAGTTGAAGGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTTGGGATTCACCCGGTCATTTGCGCTCTGTAGTTGAAGGTTAA  738

seq1  CCTCGAGTTCTGCGCCTGACCACCTGTGAGGAACGAGGAGCCGGAGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGAGTTCTGCGCCTGACCACCTGTGAGGAACGAGGAGCCGGAGCTGG  788

seq1  CTTGATAGAGAGGGATCTAGAATCCAAACAACTCTGCTAGAGCGGAATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGAGAGGGATCTAGAATCCAAACAACTCTGCTAGAGCGGAATGT  838

seq1  CCAATGACGAAGCGACACTTTCCTCTTTTAAAGGGAGTTTTAAATATCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGACGAAGCGACACTTTCCTCTTTTAAAGGGAGTTTTAAATATCAC  888

seq1  TCAAAAAGAATTTTTAACTCTTCAGGCTGAACATTTACATAATCTGAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGAATTTTTAACTCTTCAGGCTGAACATTTACATAATCTGAATT  938

seq1  CACTCCATGGGTCTCCAATTTGCAAAGAACGTGTTTTAGGGAATGAGGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATGGGTCTCCAATTTGCAAAGAACGTGTTTTAGGGAATGAGGTT  988

seq1  GTGAGGCAAAGTGTAAAAATAAAGGCATGCTCCTACCAAGATAATATTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCAAAGTGTAAAAATAAAGGCATGCTCCTACCAAGATAATATTCC  1038

seq1  TTAGCTTTCTCCTCTGCGTACACAGATGTTTAAGTCTGTCTGGCATAATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTCTCCTCTGCGTACACAGATGTTTAAGTCTGTCTGGCATAATT  1088

seq1  TCCATAGTCGACAATATGGTGAATTC  1126
      ||||||||||||||||||||||||||
seq2  TCCATAGTCGACAATATGGTGAATTC  1114