BAC Information

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BAC

Clone NameB6Ng01-103P09
Chromosome7 (Build37)
Map Location 85,256,696 - 85,257,842
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103P09.bB6Ng01-103P09.g
ACCDH912396DH912397
length1,2551,138
definitionDH912396|Mus musculus domesticus DNA, BAC clone: B6Ng01-103P09, 5' end.DH912397|Mus musculus domesticus DNA, BAC clone: B6Ng01-103P09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatccttttccaatctgttggtggcct
ttttgtcttattggcagtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcaattctagatcttacagcacaagccattgctgtt
ctattcaggaattttcccccgtgcccatatcttcgaggcttttccccact
ttctcctctataagtttcactgtttcttgttttatgtggagttccttgat
ctacttagatttgacctcagtacaaggagatagacatgggtcagttcaca
ttcttctacatgttaaccgccagttgtaccagcaccatttgttaaaaatg
ctgtctttcttccacttgatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgtatctttaattctattccattggt
ctacttgtctgtcgctatacaagtactatgcagttttatcacaattgctc
tgtagtacagctttaggtcaggcatggcgattccaccagaggttctttta
tctttgagaagagtttttgctatcctaggcattttgttattccagatgaa
tttgcagattgccttttctaattcgttgaataattgagttggaattttaa
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
cctatattgatcctgccaatccatgaacatgagagatctttcatcttctg
aaatcttttaatttcttcagagactggaagttcttatcatacagatcttt
cacttccttagttagagtcatgccaaggttattttatattatttgtgatt
attgtgacgggagttgtttccctgatttctttctcagcctgttatccttt
gtgtaaagaaagccattgacttctttgaggtattttatatccagctactt
cactgaagctgtttattcagtttaggagttccactggtggaatttttagg
gtccactatatatactattcataatcatctgcaaaagtgataattttgac
cttcctccttcccatggattcccttgaatcccttttggtgtccaattgac
ttgggctcataccttcaagtacaagatgtgtgaataatagagcagaccga
attat
gaattcctacacacatgtgtgcatacacatggatatacatgaacacacac
atatacatcatatacatacatatatacacacacacacacaaataagattc
taagttgttgagttttcttagtaattcaaatatatggtaaactgagggaa
aatgctggaagcacatatatactcacttcttataatgttataacaatgct
ttgttatatttttagcaaaaagtaaggctatactgtaagctccatatccc
tgtttatttctcatcttaaagaaaaccacttgactgaaaattttgccata
ctttagctttctcgttttactatcctgacataaactaggaagagaggccc
tatctcaaatgatgaattgcccccattatattgacccatgggcatgcatg
tggggcgttttcttaattaatgattgatatggcccagactactttggcca
aggccaaccctgggaagatggtcctgggccctataagaaagcagactgag
caagccactgagaacaagtcagaaaagtgttgctccatggtctctccttc
agtacctgtctccaggttcatgccttgagttcttgccctgacttcaattg
atgacagactctaccctttacgatgaaataaatcctttattctcaaaagc
taagtggcttttagttatggtctttaccacagctacataaagtaagctag
aaactgtgacccgagagttaagtaattctctaacatacctgactgtattg
ttttggggagtattgtggaagaatttgtaagtttggactggaaaagtcat
tgaatgttcaggcttaatgggctgttctgtgggagcttagaagatcagtg
tatcgagaaaaatgaagacatgggagtccaggcttttaaattttcagagg
gaagcaaaggctatcaggaaattcatgtcatatatctgaattaagatgtg
tagatcctgatcaactgggaccgaagcatcaattaccattacttactgct
gaagacagcaggacagctgaagattactgggacagttaatgagactagaa
catgaggctggttagttacctgtggctgtagaatagaccagaaccattga
aggtgaatttcctgggagtacctttgggaacagccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_85256696_85257842
seq2: B6Ng01-103P09.g_68_1205

seq1  GAATTCCTACACACATGTGTGCATACACATGGATATACATGAACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACACACATGTGTGCATACACATGGATATACATGAACACACAC  50

seq1  ATATACATCATATACATACATATATACACACACACACACAAATAAGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATCATATACATACATATATACACACACACACACAAATAAGATTC  100

seq1  TAAGTTGTTGAGTTTTCTTAGTAATTCAAATATATGGTAAACTGAGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTTGAGTTTTCTTAGTAATTCAAATATATGGTAAACTGAGGGAA  150

seq1  AATGCTGGAAGCACATATATACTCACTTCTTATAATGTTATAACAATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGAAGCACATATATACTCACTTCTTATAATGTTATAACAATGCT  200

seq1  TTGTTATATTTTTAGCAAAAAGTAAGGCTATACTGTAAGCTCCATATCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATATTTTTAGCAAAAAGTAAGGCTATACTGTAAGCTCCATATCCC  250

seq1  TGTTTATTTCTCATCTTAAAGAAAACCACTTGACTGAAAATTTTGCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTCTCATCTTAAAGAAAACCACTTGACTGAAAATTTTGCCATA  300

seq1  CTTTAGCTTTCTCGTTTTACTATCCTGACATAAACTAGGAAGAGAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTTTCTCGTTTTACTATCCTGACATAAACTAGGAAGAGAGGCCC  350

seq1  TATCTCAAATGATGAATTGCCCCCATTATATTGACCCATGGGCATGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAAATGATGAATTGCCCCCATTATATTGACCCATGGGCATGCATG  400

seq1  TGGGGCGTTTTCTTAATTAATGATTGATATGGCCCAGACTACTTTGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCGTTTTCTTAATTAATGATTGATATGGCCCAGACTACTTTGGCCA  450

seq1  AGGCCAACCCTGGGAAGATGGTCCTGGGCCCTATAAGAAAGCAGACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAACCCTGGGAAGATGGTCCTGGGCCCTATAAGAAAGCAGACTGAG  500

seq1  CAAGCCACTGAGAACAAGTCAGAAAAGTGTTGCTCCATGGTCTCTCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCACTGAGAACAAGTCAGAAAAGTGTTGCTCCATGGTCTCTCCTTC  550

seq1  AGTACCTGTCTCCAGGTTCATGCCTTGAGTTCTTGCCCTGACTTCAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTGTCTCCAGGTTCATGCCTTGAGTTCTTGCCCTGACTTCAATTG  600

seq1  ATGACAGACTCTACCCTTTACGATGAAATAAATCCTTTATTCTCAAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGACTCTACCCTTTACGATGAAATAAATCCTTTATTCTCAAAAGC  650

seq1  TAAGTGGCTTTTAGTTATGGTCTTTACCACAGCTACATAAAGTAAGCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGCTTTTAGTTATGGTCTTTACCACAGCTACATAAAGTAAGCTAG  700

seq1  AAACTGTGACCCGAGAGTTAAGTAATTCTCTAACATACCTGACTGTATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGACCCGAGAGTTAAGTAATTCTCTAACATACCTGACTGTATTG  750

seq1  TTTTGGGGAGTATTGTGGAAGAATTTGTAAGTTTGGACTGGAAAAGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGAGTATTGTGGAAGAATTTGTAAGTTTGGACTGGAAAAGTCAT  800

seq1  TGAATGTTCAGGCTTAATGGGCTGTTCTGTGGGAGCTTAGAAGATCAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTCAGGCTTAATGGGCTGTTCTGTGGGAGCTTAGAAGATCAGTG  850

seq1  TATCGAGAAAAATGAAGACATGGGAGTCCAGGCTTTTAAATTTTCAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGAGAAAAATGAAGACATGGGAGTCCAGGCTTTTAAATTTTCAGAGG  900

seq1  GAAGCAAAGGCTATCAGGAAAATTCATGTCATATATCTGAATTAAGAATG  950
      |||||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  GAAGCAAAGGCTATCAGG-AAATTCATGTCATATATCTGAATTAAG-ATG  948

seq1  TGTAGATCCTGATCAACTGGGACCGAAGCATCAATTACCATTACCTTACT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGTAGATCCTGATCAACTGGGACCGAAGCATCAATTACCATTA-CTTACT  997

seq1  GCTGAAGACAGCAGGACAGCTGAAGATTACTGGGACAGTTAATGAGACTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGACAGCAGGACAGCTGAAGATTACTGGGACAGTTAATGAGACTA  1047

seq1  GAACAATTGAGGCTGGTTAGTTACCTGTGGCTGTAAGAATAGACCAGAAC  1100
      |||||  ||||||||||||||||||||||||||| |||||||||||||||
seq2  GAACA--TGAGGCTGGTTAGTTACCTGTGGCTGT-AGAATAGACCAGAAC  1094

seq1  CATTG-AGGTGAAATTTCCTGGGAAGTACCTTTTGGGGAACAGCCCTT  1147
      ||||| ||||| ||||||||||| |||||||||  |||||||||||||
seq2  CATTGAAGGTG-AATTTCCTGGG-AGTACCTTT--GGGAACAGCCCTT  1138