BAC Information

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BAC

Clone NameB6Ng01-104E08
Chromosome7 (Build37)
Map Location 37,542,072 - 37,725,343
singlet/doubletdoublet
Overlap geneTshz3
Upstream genezfp507, LOC100043872, EG668988, LOC668507
Downstream geneLOC100043874, Zfp536, LOC100043453, EG627844
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104E08.bB6Ng01-104E08.g
ACCDH912621DH912622
length1,0611,142
definitionDH912621|Mus musculus domesticus DNA, BAC clone: B6Ng01-104E08, 5' end.DH912622|Mus musculus domesticus DNA, BAC clone: B6Ng01-104E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,724,281 - 37,725,343)(37,542,072 - 37,543,363)
sequence
gaattcagttcattagctcttgagaataaagtcagaaactggaggggcct
ctgcattttctcgctgagagcagtacttaaaacaaataacatcacttcct
caaacatttatagattaaactaaatggcattaattactgtaaatctccta
tttgtctggagaatgaggggttgggggaaagaaaatgctctctctaaatc
cctgagtttcgtagcaagatctctcctctctcacaaaaatgcctcgtatc
gttgggggcaaaatgtttaatcgtggaatgaacgggaagtgaatggcaag
aggagctaacaaggctcgctgtgaggggctcgctaactttttatagagca
gtgttttgcaaagctcggaagcagaaggttgcttttgaaagcccttatta
aaacgcaatccctgccacatatgtaggagctgtcttgggaaatacctgct
ttacccgtgtttgaaaagcttaaaacctgccaaggagaggtgaagaagcc
aacgttgggctgggcccaggaaatctgccccagggcctcaccaaggaagc
tggggattgacaggggatgtgctgaaccgcttgcttgttttccaaatgtg
caccttgtggtgtgtttccgatgggggtggtgcacagagaagaaaaagaa
aatcaaatcaaacaagcaaggtgctttgtaaagcaagaagccatggaact
ccccaggaaatgtacaaccatctcagatctttgggaaggacagagcatcc
ctgatctgaatacatgcatgctgtgtgtcatcatttggacatcgaatatt
gtcattatgccccaccatgtgttaaagcaggcattctcagcttgtgggtc
atgagcctttaagggtcaaatgatgttttcacaggggttacctagaccac
caggaaaacacagacatttacattgcgatttgtaacagtagcaaaatcac
agttatgtagtaccatggaaatgattttatggttggggtcaccacaacat
gaggagctttttcagagggtcacagcattaagggaggttgagaactgtgt
gttaatgcttg
gaattctttctccctaggaagttgtccaaagtggttggctccaccacaag
ttgggattcacctctttgcttttagagtaagggagagaagggcatagggt
tgaaggcttgcactttgggttttactccaggggaaccctaccttgagctc
agcaagaggcagaatggagggccagcaggaactttcatgtctctgcccat
tcttgctacagcttattctaacactaggagccatgtaagctgaaagacca
taactggccaacagatttagccagatggcatcaaccagaccctcccccag
gacagactggttacatcgtggctctgctgtgttaggtgtattaaaatgct
actgtgggacagagggaaggatacagacaccttagagagctaaacatcct
tgcacaccactgttggctagctgctcggatagcttatgggcttgatgcta
agggcaaaggtcattcagatggtctctaagtcaggtgttcacttactatt
atctaaagatttgccgaaggttgttggttgctttgccatgtgagcttttg
ccatgtgaggtgttctttgcacagactagatgccatgactctagcgaagt
atcccttgcagaagcacatggaagaacctgccagctgcctggtcccctct
ttctcttagtcctctgccttaggagaagagggaaatctggataaatattg
ctgacactgtctccggggcaggattctagggacacaagcctgaagtgtgg
gggccttgtgtgtgactctacagctcctactttcatgttgaaatattatc
ttaagctattttaatgtgaattaattatcaaaaatagtggatttcactgt
gatatttgaacatctatataatggactctcatcatgtccttcctccttgt
ccatcctccccatttctagtggtcacgctcctcttcctatgtcctcttta
ccttctctctgtctgtctctcttacatctagagttacatagagagaaaac
ttgcagtatttctttcctgagtcttggctgtatcgtttaacacgggaatc
tctggtccatctacttcctgaaaatgacggtaatttccctcttctgcgtg
gataatactttacgaccccactttcctttctcgcacatctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_37724281_37725343
seq2: B6Ng01-104E08.b_45_1105 (reverse)

seq1  CAAGCATTTAACACAGCAGTTCTCAACCTCCC-TAATGCTGTGACCCTCT  49
      |||||| |||||||| |||||||||||||||| |||||||||||||||||
seq2  CAAGCA-TTAACACA-CAGTTCTCAACCTCCCTTAATGCTGTGACCCTCT  48

seq1  GAAAAAGCTCCTCATGTTGTGGTGACCCCAACCATAAAATCATTTCCATT  99
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAAAAAGCTCCTCATGTTGTGGTGACCCCAACCATAAAATCATTTCCA-T  97

seq1  GTTACTACATAACTGTGATTTTGCTACTGTTACAAATCGCAATGTAAATG  149
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTACATAACTGTGATTTTGCTACTGTTACAAATCGCAATGTAAATG  147

seq1  TCTGTGTTTT-CTGGTGGTCTTAGGTAACCCCTGTGAAAACATCATTTGA  198
      |||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  TCTGTGTTTTCCTGGTGGTC-TAGGTAACCCCTGTGAAAACATCATTTGA  196

seq1  CCCTTAAAGGCTCATGACCCACAAGCTGAGAATGCCTGCTTTAACACATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAAAGGCTCATGACCCACAAGCTGAGAATGCCTGCTTTAACACATG  246

seq1  GTGGGGCATAATGACAATATTCGATGTCCAAATGATGACACACAGCATGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCATAATGACAATATTCGATGTCCAAATGATGACACACAGCATGC  296

seq1  ATGTATTCAGATCAGGGATGCTCTGTCCTTCCCAAAGATCTGAGATGGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTCAGATCAGGGATGCTCTGTCCTTCCCAAAGATCTGAGATGGTT  346

seq1  GTACATTTCCTGGGGAGTTCCATGGCTTCTTGCTTTACAAAGCACCTTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTCCTGGGGAGTTCCATGGCTTCTTGCTTTACAAAGCACCTTGC  396

seq1  TTGTTTGATTTGATTTTCTTTTTCTTCTCTGTGCACCACCCCCATCGGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGATTTGATTTTCTTTTTCTTCTCTGTGCACCACCCCCATCGGAA  446

seq1  ACACACCACAAGGTGCACATTTGGAAAACAAGCAAGCGGTTCAGCACATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCACAAGGTGCACATTTGGAAAACAAGCAAGCGGTTCAGCACATC  496

seq1  CCCTGTCAATCCCCAGCTTCCTTGGTGAGGCCCTGGGGCAGATTTCCTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCAATCCCCAGCTTCCTTGGTGAGGCCCTGGGGCAGATTTCCTGG  546

seq1  GCCCAGCCCAACGTTGGCTTCTTCACCTCTCCTTGGCAGGTTTTAAGCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCCCAACGTTGGCTTCTTCACCTCTCCTTGGCAGGTTTTAAGCTT  596

seq1  TTCAAACACGGGTAAAGCAGGTATTTCCCAAGACAGCTCCTACATATGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACACGGGTAAAGCAGGTATTTCCCAAGACAGCTCCTACATATGTG  646

seq1  GCAGGGATTGCGTTTTAATAAGGGCTTTCAAAAGCAACCTTCTGCTTCCG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGATTGCGTTTTAATAAGGGCTTTCAAAAGCAACCTTCTGCTTCCG  696

seq1  AGCTTTGCAAAACACTGCTCTATAAAAAGTTAGCGAGCCCCTCACAGCGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCAAAACACTGCTCTATAAAAAGTTAGCGAGCCCCTCACAGCGA  746

seq1  GCCTTGTTAGCTCCTCTTGCCATTCACTTCCCGTTCATTCCACGATTAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTTAGCTCCTCTTGCCATTCACTTCCCGTTCATTCCACGATTAAA  796

seq1  CATTTTGCCCCCAACGATACGAGGCATTTTTGTGAGAGAGGAGAGATCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGCCCCCAACGATACGAGGCATTTTTGTGAGAGAGGAGAGATCTT  846

seq1  GCTACGAAACTCAGGGATTTAGAGAGAGCATTTTCTTTCCCCCAACCCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGAAACTCAGGGATTTAGAGAGAGCATTTTCTTTCCCCCAACCCCT  896

seq1  CATTCTCCAGACAAATAGGAGATTTACAGTAATTAATGCCATTTAGTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCAGACAAATAGGAGATTTACAGTAATTAATGCCATTTAGTTTA  946

seq1  ATCTATAAATGTTTGAGGAAGTGATGTTATTTGTTTTAAGTACTGCTCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAAATGTTTGAGGAAGTGATGTTATTTGTTTTAAGTACTGCTCTC  996

seq1  AGCGAGAAAATGCAGAGGCCCCTCCAGTTTCTGACTTTATTCTCAAGAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGAAAATGCAGAGGCCCCTCCAGTTTCTGACTTTATTCTCAAGAGC  1046

seq1  TAATGAACTGAATTC  1063
      |||||||||||||||
seq2  TAATGAACTGAATTC  1061

seq1: chr7_37542072_37543363
seq2: B6Ng01-104E08.g_70_1211

seq1  GAATTCTTTCTCCCTAGGAAGTTGTCCAAAGTGGTTGGCTCCACCACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCCCTAGGAAGTTGTCCAAAGTGGTTGGCTCCACCACAAG  50

seq1  TTGGGATTCACCTCTTTGCTTTTAGAGTAAGGGAGAGAAGGGCATAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATTCACCTCTTTGCTTTTAGAGTAAGGGAGAGAAGGGCATAGGGT  100

seq1  TGAAGGCTTGCACTTTGGGTTTTACTCCAGGGGAACCCTACCTTGAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCTTGCACTTTGGGTTTTACTCCAGGGGAACCCTACCTTGAGCTC  150

seq1  AGCAAGAGGCAGAATGGAGGGCCAGCAGGAACTTTCATGTCTCTGCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGGCAGAATGGAGGGCCAGCAGGAACTTTCATGTCTCTGCCCAT  200

seq1  TCTTGCTACAGCTTATTCTAACACTAGGAGCCATGTAAGCTGAAAGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTACAGCTTATTCTAACACTAGGAGCCATGTAAGCTGAAAGACCA  250

seq1  TAACTGGCCAACAGATTTAGCCAGATGGCATCAACCAGACCCTCCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGCCAACAGATTTAGCCAGATGGCATCAACCAGACCCTCCCCCAG  300

seq1  GACAGACTGGTTACATCGTGGCTCTGCTGTGTTAGGTGTATTAAAATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACTGGTTACATCGTGGCTCTGCTGTGTTAGGTGTATTAAAATGCT  350

seq1  ACTGTGGGACAGAGGGAAGGATACAGACACCTTAGAGAGCTAAACATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGACAGAGGGAAGGATACAGACACCTTAGAGAGCTAAACATCCT  400

seq1  TGCACACCACTGTTGGCTAGCTGCTCGGATAGCTTATGGGCTTGATGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACCACTGTTGGCTAGCTGCTCGGATAGCTTATGGGCTTGATGCTA  450

seq1  AGGGCAAAGGTCATTCAGATGGTCTCTAAGTCAGGTGTTCACTTACTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAAGGTCATTCAGATGGTCTCTAAGTCAGGTGTTCACTTACTATT  500

seq1  ATCTAAAGATTTGCCGAAGGTTGTTGGTTGCTTTGCCATGTGAGCTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGATTTGCCGAAGGTTGTTGGTTGCTTTGCCATGTGAGCTTTTG  550

seq1  CCATGTGAGGTGTTCTTTGCACAGACTAGATGCCATGACTCTAGCGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGAGGTGTTCTTTGCACAGACTAGATGCCATGACTCTAGCGAAGT  600

seq1  ATCCCTTGCAGAAGCACATGGAAGAACCTGCCAGCTGCCTGGTCCCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTGCAGAAGCACATGGAAGAACCTGCCAGCTGCCTGGTCCCCTCT  650

seq1  TTCTCTTAGTCCTCTGCCTTAGGAGAAGAGGGAAATCTGGATAAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTAGTCCTCTGCCTTAGGAGAAGAGGGAAATCTGGATAAATATTG  700

seq1  CTGACACTGTCTCCGGGGCAGGATTCTAGGGACACAAGCCTGAAGTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACTGTCTCCGGGGCAGGATTCTAGGGACACAAGCCTGAAGTGTGG  750

seq1  GGGCCTTGTGTGTGACTCTACAGCTCCTACTTTCATGTTGAAATATTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGTGTGTGACTCTACAGCTCCTACTTTCATGTTGAAATATTATC  800

seq1  TTAAGCTATTTTAATGTGAATTAATTATCAAAAATAGTGGATTTCACTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTATTTTAATGTGAATTAATTATCAAAAATAGTGGATTTCACTGT  850

seq1  GATATTTGAACATCTATATAATGGACTCTCATCATGTCCTTCCTCCTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGAACATCTATATAATGGACTCTCATCATGTCCTTCCTCCTTGT  900

seq1  CCATCCTCCCCCATTTCTAGTGGTCACGCTCCTCTTTCCTAATTGTTCCT  950
      ||||||| |||||||||||||||||||||||||| ||||||  || ||||
seq2  CCATCCT-CCCCATTTCTAGTGGTCACGCTCCTC-TTCCTA--TG-TCCT  945

seq1  CTTTTACCTTCTTCTCTGTCTGTTCTCTCTTACAATCTAGAGTCTACATT  1000
      | ||||||||| |||||||||| |||||||||| ||||||||| |||| |
seq2  C-TTTACCTTC-TCTCTGTCTG-TCTCTCTTAC-ATCTAGAGT-TACA-T  989

seq1  AGAGAGAAAACATGCAGTAATTTTCTTCCTGAGTCTGGCTTGTATCGTTT  1050
      ||||||||||| |||||| ||||  ||||||||||| |  ||||||||||
seq2  AGAGAGAAAACTTGCAGT-ATTTCTTTCCTGAGTCTTGGCTGTATCGTTT  1038

seq1  AACACAGTGATCTCTGGTTCCATCTACCTTCCTGAAAATGAC-GTAATTT  1099
      ||||| |  |||||||| |||||||| ||||||||||||||| |||||||
seq2  AACACGGGAATCTCTGG-TCCATCTA-CTTCCTGAAAATGACGGTAATTT  1086

seq1  CCTTCTTTCTGGCTGAGTAATACTTCACGCACCACA-TTTCCTTTCTCCA  1148
      || || |||||  ||  |||||||| ||| ||| || |||||||||| | 
seq2  CCCTC-TTCTGCGTGGATAATACTTTACG-ACCCCACTTTCCTTTCT-CG  1133

seq1  CACATCT-GTGGCAGGCACCGAGGCTGATTCCCTGACTTGGTGCTGTGAG  1197
      ||||||| |                                         
seq2  CACATCTGG-----------------------------------------  1142

seq1  AAGTGTTCAGTCAGCAGACATGTGCAGGTGTCGCTGGGTTTGCTGATGTT  1247
                                                        
seq2  --------------------------------------------------  1142

seq1  GATGATCTGGAGGTACCTAAGCCACTTGTCTTCTGCCACATCTGG  1292
                                                   
seq2  ---------------------------------------------  1142