BAC Information

Click to search

BAC

Clone NameB6Ng01-104G04
Chromosome7 (Build37)
Map Location 136,885,912 - 136,887,075
singlet/doubletsinglet
Overlap genenone
Upstream geneSec23ip, LOC210714, LOC100043144, Ppapdc1a, Brwd2
Downstream geneLOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104G04.bB6Ng01-104G04.g
ACCDH912701DH912702
length1,1471,018
definitionDH912701|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G04, 5' end.DH912702|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaataaataaatgtaatcagttaatgaatttacattcataaa
gaaaggcatacatcaaatcagaagtttggtgggttttcgagctcaaaaaa
acccacatggtttattgcacaaggggttccaggtagtaaaacaggttatg
cccacactaaaaatagaagagaacataaatggggtgaagtggctcaggcc
tatagtctcaatgcccaaaggctgaggaaggagaatcctgggagactgaa
gcattctggagccacagtatgtaagactctgcttcaaaaagaaacaaaca
aaaaccttgaaaggtacactggggagtgcagagctaactagcatgtcttc
taagagctcatgctttctagggcctgggaagagtgcctcgcctcctcggg
gaacaatccctctcctctccctgtactagaggcccatccatgtctgaatg
gccatagcataaaccaaatcaaactgtagaggcttagggccattggtcca
gctcatgggcctgttggttggttggtgattcagtctaggtttatgtgaac
agttcttcctgtcttggcgaggaagtaccctggctgttgtaggggacaat
agagtaaattgattctgccctcaaggtttgtcagccctcggcacactacc
ctggagtgctcttgtggcccagcagagttcttggagtgggaacagaagta
tgactattctctttcagacttagcatgcatgcgtctcctctgctaacatc
ccttcaactggagggcttctcacatgaccaaagtcaaacttggggtcata
tggaaagacatatagagacagggaggcatatgtcactggggtaccaagtg
aggcaggagaccgggggtgagaaagtcaggaagaggctcccctgccagtg
gttccgtgctcagttgaagcttagaaaggatgtacttgctgtagatgtga
atgagacaaacatctagaagtagagatgagagaccagacgggtgcagaca
ttagctagtagaacacagccctaaagcttccttgtacctgaagtaccact
gtgtcaacagccttcagcccctctctgcattatgacactgtagctgcctg
gagcaattacacttgctatatcagtggtccagaaacagatgctacac
gaattctattgttaatccatctagccctggactttttattaccatttctt
tctcattggttttgggtctgtccaggtggttgacttcttggtttaatttt
ggtagtttggctaaatctagaaattctatttctcctaaattttccacctt
agtggagtacagggtattaaaatatttccttatgatgtcctgaatttctt
tggtgtctgttgtaatgttttcctgttcatttctgattctgttaattttg
gtctttactttctttcttttggttagttgggccaaagatctctgaatctt
acttttcttctcaaaaaaaaaaaaaaaacctttaatattgttgattcttt
gtattgttctgtgtctattttatttcttgccaacagctgggtttgaattt
gttttgttcctcttttcccaattcttgagttgcattattaaggaatttaa
tttacttctttctgattttttttaacgtaggcacttaggcctgcaaatgt
cacgtatgggctgcttttcagtgtcttccagagtcttcactgtgctgagt
tttcattttgttgcacttcatttagttcttcatttcttcattgctgcact
tgccatttggcaatgagttgtttatctccaagcttttgtgtatttactag
agatttgtttgctgtaaattgcaaatttttactgcattgtggccagacag
gatagaaggaattattccaatctctctgaatttgtaacgatgatttgtgt
ttttgtccaaggatgtgatctgttttagaaaagcggatgtgatctgtgag
ttgctgagtctaatgtgtttattctttggtattgaatagatagtctgtag
aatatgttagtctgttgatgtttgatgtaaaattaattctaccatttgtt
tgtttgttgtttatttttgtcagatgcgcttcagtttagaagtgagtgga
gtatgaattacctcagttgatagattgtggtaagtgtggcttaaatcacg
tgttttatttaaaaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136885912_136887075
seq2: B6Ng01-104G04.b_46_1192

seq1  GAATTCAAAAATAAATAAATGTAATCAGTTAATGAATTTACATTCATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATAAATAAATGTAATCAGTTAATGAATTTACATTCATAAA  50

seq1  GAAAGGCATACATCAAATCAGAAGTTTGGTGGGTTTTCGAGCTCAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCATACATCAAATCAGAAGTTTGGTGGGTTTTCGAGCTCAAAAAA  100

seq1  ACCCACATGGTTTATTGCACAAGGGGTTCCAGGTAGTAAAACAGGTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATGGTTTATTGCACAAGGGGTTCCAGGTAGTAAAACAGGTTATG  150

seq1  CCCACACTAAAAATAGAAGAGAACATAAATGGGGTGAAGTGGCTCAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTAAAAATAGAAGAGAACATAAATGGGGTGAAGTGGCTCAGGCC  200

seq1  TATAGTCTCAATGCCCAAAGGCTGAGGAAGGAGAATCCTGGGAGACTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTCAATGCCCAAAGGCTGAGGAAGGAGAATCCTGGGAGACTGAA  250

seq1  GCATTCTGGAGCCACAGTATGTAAGACTCTGCTTCAAAAAGAAACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTGGAGCCACAGTATGTAAGACTCTGCTTCAAAAAGAAACAAACA  300

seq1  AAAACCTTGAAAGGTACACTGGGGAGTGCAGAGCTAACTAGCATGTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTGAAAGGTACACTGGGGAGTGCAGAGCTAACTAGCATGTCTTC  350

seq1  TAAGAGCTCATGCTTTCTAGGGCCTGGGAAGAGTGCCTCGCCTCCTCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCTCATGCTTTCTAGGGCCTGGGAAGAGTGCCTCGCCTCCTCGGG  400

seq1  GAACAATCCCTCTCCTCTCCCTGTACTAGAGGCCCATCCATGTCTGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATCCCTCTCCTCTCCCTGTACTAGAGGCCCATCCATGTCTGAATG  450

seq1  GCCATAGCATAAACCAAATCAAACTGTAGAGGCTTAGGGCCATTGGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGCATAAACCAAATCAAACTGTAGAGGCTTAGGGCCATTGGTCCA  500

seq1  GCTCATGGGCCTGTTGGTTGGTTGGTGATTCAGTCTAGGTTTATGTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGGGCCTGTTGGTTGGTTGGTGATTCAGTCTAGGTTTATGTGAAC  550

seq1  AGTTCTTCCTGTCTTGGCGAGGAAGTACCCTGGCTGTTGTAGGGGACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTCCTGTCTTGGCGAGGAAGTACCCTGGCTGTTGTAGGGGACAAT  600

seq1  AGAGTAAATTGATTCTGCCCTCAAGGTTTGTCAGCCCTCGGCACACTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAATTGATTCTGCCCTCAAGGTTTGTCAGCCCTCGGCACACTACC  650

seq1  CTGGAGTGCTCTTGTGGCCCAGCAGAGTTCTTGGAGTGGGAACAGAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGCTCTTGTGGCCCAGCAGAGTTCTTGGAGTGGGAACAGAAGTA  700

seq1  TGACTATTCTCTTTCAGACTTAGCATGCATGCGTCTCCTCTGCTAACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTCTCTTTCAGACTTAGCATGCATGCGTCTCCTCTGCTAACATC  750

seq1  CCTTCAACTGGAGGGCTTCTCACATGACCAAAGTCAAACTTGGGGTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAACTGGAGGGCTTCTCACATGACCAAAGTCAAACTTGGGGTCATA  800

seq1  TGGAAAGACATATAGAGACAGGGAGGCATATGTCACTGGGGTACCAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGACATATAGAGACAGGGAGGCATATGTCACTGGGGTACCAAGTG  850

seq1  AGGCAGGAGACCGGGGGTGAGAAAGTCAGGAAGAGGCTCCCCTGCCAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAGACCGGGGGTGAGAAAGTCAGGAAGAGGCTCCCCTGCCAGTG  900

seq1  GTTCCGTGCTCAGTTGAAGCTTAGGAAGGATGTACTTGCTGTAGATGTGA  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTTCCGTGCTCAGTTGAAGCTTAGAAAGGATGTACTTGCTGTAGATGTGA  950

seq1  ATGAGACAAACATCTAAGAAGTAGAGATGAGAGGACCAAGACGGGTGCAG  1000
      ||||||||||||||| |||||||||||||||| |||| ||||||||||||
seq2  ATGAGACAAACATCT-AGAAGTAGAGATGAGA-GACC-AGACGGGTGCAG  997

seq1  ACATAAGCTAGGTAGAACACAGGCCCTAAAGCTTCCTTGTACCTGAGGTT  1050
      |||| ||||| |||||||||| |||||||||||||||||||||||| | |
seq2  ACATTAGCTA-GTAGAACACA-GCCCTAAAGCTTCCTTGTACCTGAAG-T  1044

seq1  ACCACTGTGTCCAAACCAGCCTTCAGGCCCCTCTCTGCCATTATGACCAC  1100
      |||||||||||   | ||||||||| ||||||||||| |||||||| |||
seq2  ACCACTGTGTC---AACAGCCTTCA-GCCCCTCTCTG-CATTATGA-CAC  1088

seq1  TGTAGCTGCCTGAGCCAATTACACTTGCTATATCCAGTGGTGTCCAGAAA  1150
      ||||||||||||   |||||||||||||||||| |||||  |||||||| 
seq2  TGTAGCTGCCTGGAGCAATTACACTTGCTATAT-CAGTG--GTCCAGAA-  1134

seq1  TACAGATGCTACAC  1164
       |||||||||||||
seq2  -ACAGATGCTACAC  1147