BAC Information

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BAC

Clone NameB6Ng01-104M18
Chromosome7 (Build37)
Map Location 126,938,829 - 127,078,753
singlet/doubletdoublet
Overlap gene2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3
Upstream gene9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1
Downstream geneTmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104M18.bB6Ng01-104M18.g
ACCDH912990DH912991
length1,110888
definitionDH912990|Mus musculus domesticus DNA, BAC clone: B6Ng01-104M18, 5' end.DH912991|Mus musculus domesticus DNA, BAC clone: B6Ng01-104M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,077,643 - 127,078,753)(126,938,829 - 126,939,396)
sequence
gaattcagatggaaaaaaattttctcattcttcctcaaagaatagacaat
ataatcccaaggaaaaaagagaaaatagaatgtgctgtattaactgataa
aacttgggcaaaggtccacatgaaactcattagaaagactgtggcatctt
cgagatctcacataggttcccccttcaggtccacaagtgaagagcttgcc
tagatcctctcaccaagtactaacattccctttatgtgaagctccagata
taccaactgaacaaaagagaccaacgcttggagtagtgttactgagcatt
tctgtcctaccttcttggatatttggcaatatctgggggtggttctagtt
cttcataataaagaggaaaatgctattcatgtctaatgaggagaggccag
aggtgctgtgaaatattctataatctgcataggacagcccccaacacaac
gtagacctgttgacagggcagagcttgagaacccttcttttgagtggttt
tgtaatgcagtgccaccttgactttaacttggtacccctaagataaagga
gtggctcttggcttagtaaaagaacttcagagaagtggcccttgcagaga
aggtgatcccagggctcctaaccccatagaatgagtgcagaattgtcctg
gaagatggtcttggtagagcattgcctggggttattaatcaatcactgtg
ccattcaagttggagggcagctttctaaccatactcttaaggataagcag
ccctggctggggaaatagtccccaaatctcaatggtgaattacatcaaag
gtctacttcttgctcactcctatgcacatcaacagacatctctgctgttg
tacttatctattgggcacacagttagtactaccggaagatccagcaatac
ctctcctgggcatatacccagaagatggtccacttgtaataaggacacca
tgctctactatgttcataagcagccttatttataatagcaagaagctgga
aagaaccagatgcccctcaacgaaggatggatacaaaaatggtggttcat
ttacacatggagtactactcagccattaaaaacatgaaattttgaaaatc
ctttaggcaa
gaattcagtccctagaacagaaactcaaaaaagtggttaatagtaaatac
ctaaccttagctcaaggccattgtataagttagggtctctattgctgtga
taaaacaccatgacctcataaccaaaatcatcttgtctagggatgggttt
atctcagctctcatagccagatcacagtcctattcacaattcttcactag
aattcaggtcaagagccaggaggcagtaactgatacagaggccaggaagg
gaggaggactgcctaccactttgctcctcaggacttgctcagtcttcctt
ctttctttcttccttcctttctttctttctttctttctttctttctttct
ttctttctttcttaatattttttattaggtattttcctcatttacatttc
caatgctatcccaaaagtcccccatatcctccccccacactcccctaccc
atccactcccacttttggccctggcattccgctgtactggggcatataaa
gtttgcatgtacaatgggcctctctttccagtgatggctgactaggccat
cttttgatacatatgcagctagagtcaagagctcaggggtactggttagt
tcataatgttgttctacctatagggttgcagatccctttagctccttgga
tactttctctagctcctccattgggggccctgtgatccatccaatagctg
actgtgagcatccacttctgtgtttgctaggccccggcctagtctcacaa
gagacagctatatcagggtcctttcagcaaaaaatcttgctagtgtatgc
aatggtgtcagcgtttggaggctgattatgggatggatccctggatatgg
cagtctctagatggtccatcttttgtctcagctccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127077643_127078753
seq2: B6Ng01-104M18.b_45_1154 (reverse)

seq1  TTGCCTAAA-GAATTTCATAAATTCATTGTTTTTAATAGCTGAGTAGTAC  49
      ||||||||| || ||||| || |||| |||||||||| ||||||||||||
seq2  TTGCCTAAAGGATTTTCAAAATTTCA-TGTTTTTAATGGCTGAGTAGTAC  49

seq1  TCCATTGTGTAAATGTACCACATTTTTTGTATCCATTCCTCTGTTGAGGG  99
      |||| |||||||||| |||||  |||||||||||| ||||  ||||||||
seq2  TCCA-TGTGTAAATGAACCACCATTTTTGTATCCA-TCCTTCGTTGAGGG  97

seq1  GCATCTGGGTTCTTTCCAGCTTCTTGCTATTATAAATAAGGCTGC-TATG  148
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  GCATCT-GGTTCTTTCCAGCTTCTTGCTATTATAAATAAGGCTGCTTATG  146

seq1  AACATAGTAGAGCAT-GTGTCCTTATTACAAGTTGGACCATCTTCTGGGT  197
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  AACATAGTAGAGCATGGTGTCCTTATTACAAG-TGGACCATCTTCTGGGT  195

seq1  ATATGCCCAGGAGAGGTATTGCTGGATCTTCCGGTAGTACTAACTGTGTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCCAGGAGAGGTATTGCTGGATCTTCCGGTAGTACTAACTGTGTG  245

seq1  CCCAATAGATAAGTACAACAGCAGAGATGTCTGTTGATGTGCATAGGAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAGATAAGTACAACAGCAGAGATGTCTGTTGATGTGCATAGGAGT  295

seq1  GAGCAAGAAGTAGACCTTTGATGTAATTCACCATTGAGATTTGGGGACTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAAGTAGACCTTTGATGTAATTCACCATTGAGATTTGGGGACTA  345

seq1  TTTCCCCAGCCAGGGCTGCTTATCCTTAAGAGTATGGTTAGAAAGCTGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCAGCCAGGGCTGCTTATCCTTAAGAGTATGGTTAGAAAGCTGCC  395

seq1  CTCCAACTTGAATGGCACAGTGATTGATTAATAACCCCAGGCAATGCTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACTTGAATGGCACAGTGATTGATTAATAACCCCAGGCAATGCTCT  445

seq1  ACCAAGACCATCTTCCAGGACAATTCTGCACTCATTCTATGGGGTTAGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGACCATCTTCCAGGACAATTCTGCACTCATTCTATGGGGTTAGGA  495

seq1  GCCCTGGGATCACCTTCTCTGCAAGGGCCACTTCTCTGAAGTTCTTTTAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGATCACCTTCTCTGCAAGGGCCACTTCTCTGAAGTTCTTTTAC  545

seq1  TAAGCCAAGAGCCACTCCTTTATCTTAGGGGTACCAAGTTAAAGTCAAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAAGAGCCACTCCTTTATCTTAGGGGTACCAAGTTAAAGTCAAGG  595

seq1  TGGCACTGCATTACAAAACCACTCAAAAGAAGGGTTCTCAAGCTCTGCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTGCATTACAAAACCACTCAAAAGAAGGGTTCTCAAGCTCTGCCC  645

seq1  TGTCAACAGGTCTACGTTGTGTTGGGGGCTGTCCTATGCAGATTATAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACAGGTCTACGTTGTGTTGGGGGCTGTCCTATGCAGATTATAGAA  695

seq1  TATTTCACAGCACCTCTGGCCTCTCCTCATTAGACATGAATAGCATTTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACAGCACCTCTGGCCTCTCCTCATTAGACATGAATAGCATTTTC  745

seq1  CTCTTTATTATGAAGAACTAGAACCACCCCCAGATATTGCCAAATATCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTATGAAGAACTAGAACCACCCCCAGATATTGCCAAATATCCA  795

seq1  AGAAGGTAGGACAGAAATGCTCAGTAACACTACTCCAAGCGTTGGTCTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTAGGACAGAAATGCTCAGTAACACTACTCCAAGCGTTGGTCTCT  845

seq1  TTTGTTCAGTTGGTATATCTGGAGCTTCACATAAAGGGAATGTTAGTACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGTTGGTATATCTGGAGCTTCACATAAAGGGAATGTTAGTACT  895

seq1  TGGTGAGAGGATCTAGGCAAGCTCTTCACTTGTGGACCTGAAGGGGGAAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGAGGATCTAGGCAAGCTCTTCACTTGTGGACCTGAAGGGGGAAC  945

seq1  CTATGTGAGATCTCGAAGATGCCACAGTCTTTCTAATGAGTTTCATGTGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGAGATCTCGAAGATGCCACAGTCTTTCTAATGAGTTTCATGTGG  995

seq1  ACCTTTGCCCAAGTTTTATCAGTTAATACAGCACATTCTATTTTCTCTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGCCCAAGTTTTATCAGTTAATACAGCACATTCTATTTTCTCTTT  1045

seq1  TTTCCTTGGGATTATATTGTCTATTCTTTGAGG-ACAATGAGAAAATTTT  1096
      ||||||||||||||||||||||||||||||||| | ||||||||||||||
seq2  TTTCCTTGGGATTATATTGTCTATTCTTTGAGGAAGAATGAGAAAATTTT  1095

seq1  TTTCCATCTGAATTC  1111
      |||||||||||||||
seq2  TTTCCATCTGAATTC  1110

seq1: chr7_126938829_126939396
seq2: B6Ng01-104M18.g_70_633

seq1  GAATTCAGTCCCTAGAACAGAAACTCAAAAAAGTGGTTAATAGTAAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCCTAGAACAGAAACTCAAAAAAGTGGTTAATAGTAAATAC  50

seq1  CTAACCTTAGCTCAAGGCCATTGTATAAGTTAGGGTCTCTATTGCTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTTAGCTCAAGGCCATTGTATAAGTTAGGGTCTCTATTGCTGTGA  100

seq1  TAAAACACCATGACCTCATAACCAAAATCATCTTGTCTAGGGATGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACCATGACCTCATAACCAAAATCATCTTGTCTAGGGATGGGTTT  150

seq1  ATCTCAGCTCTCATAGCCAGATCACAGTCCTATTCACAATTCTTCACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCTCTCATAGCCAGATCACAGTCCTATTCACAATTCTTCACTAG  200

seq1  AATTCAGGTCAAGAGCCAGGAGGCAGTAACTGATACAGAGGCCAGGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGTCAAGAGCCAGGAGGCAGTAACTGATACAGAGGCCAGGAAGG  250

seq1  GAGGAGGACTGCCTACCACTTTGCTCCTCAGGACTTGCTCAGTCTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGACTGCCTACCACTTTGCTCCTCAGGACTTGCTCAGTCTTCCTT  300

seq1  CTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  350
      ||||||||||||||||    ||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTCCTTC----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  346

seq1  TTCTTTCTTTCTTTCTTAATATTTTTTATTAGGTATTTTCCTCATTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTAATATTTTTTATTAGGTATTTTCCTCATTTACA  396

seq1  TTTCCAATGCTATCCCAAAAGTCCCCCATATCCTCCCCCCACACTCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATGCTATCCCAAAAGTCCCCCATATCCTCCCCCCACACTCCCCT  446

seq1  ACCCATCCACTCCCACTTTTGGCCCTGGCATTCCGCTGTACTGGGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCCACTCCCACTTTTGGCCCTGGCATTCCGCTGTACTGGGGCATA  496

seq1  TAAAGTTTGCATGTACAATGGGCCTCTCTTTCCAGTGATGGCTGACTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTGCATGTACAATGGGCCTCTCTTTCCAGTGATGGCTGACTAGG  546

seq1  CCATCTTTTGATACATAT  568
      ||||||||||||||||||
seq2  CCATCTTTTGATACATAT  564