BAC Information

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BAC

Clone NameB6Ng01-105F20
Chromosome7 (Build37)
Map Location 117,686,007 - 117,865,677
singlet/doubletdoublet
Overlap geneSbf2, Adm
Upstream geneSt5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, LOC668246
Downstream geneB430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105F20.bB6Ng01-105F20.g
ACCDH913408DH913409
length313833
definitionDH913408|Mus musculus domesticus DNA, BAC clone: B6Ng01-105F20, 5' end.DH913409|Mus musculus domesticus DNA, BAC clone: B6Ng01-105F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,686,007 - 117,686,319)(117,864,853 - 117,865,677)
sequence
gaattctcaactgaggaataccaaatggctgagaaacacctgaagaaatg
ttcaacatccttaaacatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacagtcagaatggctaagatcaaaaattcaggtgacagcaga
tgctggtggcacatgcctttaatcccagcacttgggaggcagaggcaggc
gaatttctgagtttgaggccatcctggtctacagagtgagttccaggaca
gccagggctatacagagaaaccctgtctcgaacacccatcccaaaagggg
gggggggggggaa
gaattcttgtagggcaacgcagaagagaagcaggccagctctgagctcag
ccacacttggctctgggcaaacccatccctgacaaagcccagagcccaaa
gtagggggagagccaactagaggaaacgggtggatgttgctggttgccac
tagctatctggacttggacttccaggttcttagtatgttattgaaagaac
tgaagagcacacaacagtgaagcagcaacacgttttgtttgaagagacag
tacaggacacactacaagggagcacaggccactttggctagaacgtccaa
aagagcagcaagttacatttatgtcctttgtgaatccttttataggttca
ggaggagatgttgattgataggggatgattgttctttctgttttgattgg
caagtgcagattatgtaagcctttgttgccttgatcatatagtggccaac
actccatgacgtaagcctctgttcactaggtatgccctttcctatgattt
atctgactttaatcatatgcaagcacgattatgcttaggcataagataat
aaatagtggtttttccctgtttccctcagagaacccactttactttttct
ctgtatgcatcaaaaacgagtttaggcaggatggggaccctgcctcccat
tccctgatatgccttggtacatgtctgaaatgaaaaatcagacgtttcca
taggattgtccaaggaaaagtgactcactccacttgtctgcagatcaatg
tgcatgcagctcagtgcaggggagagtcccagattgccatatacattgaa
agaaaggtatgggttatagatagctcaatccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117686007_117686319
seq2: B6Ng01-105F20.b_42_354

seq1  GAATTCTCAACTGAGGAATACCAAATGGCTGAGAAACACCTGAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTGAGGAATACCAAATGGCTGAGAAACACCTGAAGAAATG  50

seq1  TTCAACATCCTTAAACATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAAACATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA  150

seq1  TGCTGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGC  200

seq1  GAATTTCTGAGTTTGAGGCCATCCTGGTCTACAGAGTGAGTTCCAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTGAGTTTGAGGCCATCCTGGTCTACAGAGTGAGTTCCAGGACA  250

seq1  GCCAGGGCTATACAGAGAAACCCTGTCTCGAACACCCATCCCAAAAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTATACAGAGAAACCCTGTCTCGAACACCCATCCCAAAAGGGG  300

seq1  GGGGGGGGGGGAA  313
      |||||||||||||
seq2  GGGGGGGGGGGAA  313

seq1: chr7_117864853_117865677
seq2: B6Ng01-105F20.g_70_902 (reverse)

seq1  TTGGATTGAGCTATCTAT-ACCCATACCCTTCTTTCAATGTATTTGGCAA  49
      |||||||||||||||||| ||||||||| |||||||||||||| ||||||
seq2  TTGGATTGAGCTATCTATAACCCATACCTTTCTTTCAATGTATATGGCAA  50

seq1  TCTGGGACTCTCCCCTGCACTGAGCTGCATGCACATTGATCTGCAGAC-A  98
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTGGGACTCTCCCCTGCACTGAGCTGCATGCACATTGATCTGCAGACAA  100

seq1  GTGGAGTGAGTCACTTTTCCTT-GACAATCCTATGGAAACGTCTGA-TTT  146
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  GTGGAGTGAGTCACTTTTCCTTGGACAATCCTATGGAAACGTCTGATTTT  150

seq1  TCA-TTCAGACATGTACCAAGGCATATCAGGGAATGGGAGGCAGGGT-CC  194
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCATTTCAGACATGTACCAAGGCATATCAGGGAATGGGAGGCAGGGTCCC  200

seq1  CATCCTGCCTAAACTCGTTTTTGATGCATACAGAG-AAAAGTAAAGTGGG  243
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CATCCTGCCTAAACTCGTTTTTGATGCATACAGAGAAAAAGTAAAGTGGG  250

seq1  TTCTCTGAGGGAAACAGGG-AAAACCACTATTTATTATCTTATGCCTAAG  292
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCTCTGAGGGAAACAGGGAAAAACCACTATTTATTATCTTATGCCTAAG  300

seq1  CATAATCGTGCTTGCATATGATTAAAGTCAGATAAATCATAGGAAAGGGC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCGTGCTTGCATATGATTAAAGTCAGATAAATCATAGGAAAGGGC  350

seq1  ATACCTAGTGAACAGAGGCTTACGTCATGGAGTGTTGGCCACTATATGAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGTGAACAGAGGCTTACGTCATGGAGTGTTGGCCACTATATGAT  400

seq1  CAAGGCAACAAAGGCTTACATAATCTGCACTTGCCAATCAAAACAGAAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAACAAAGGCTTACATAATCTGCACTTGCCAATCAAAACAGAAAG  450

seq1  AACAATCATCCCCTATCAATCAACATCTCCTCCTGAACCTATAAAAGGAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCATCCCCTATCAATCAACATCTCCTCCTGAACCTATAAAAGGAT  500

seq1  TCACAAAGGACATAAATGTAACTTGCTGCTCTTTTGGACGTTCTAGCCAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGGACATAAATGTAACTTGCTGCTCTTTTGGACGTTCTAGCCAA  550

seq1  AGTGGCCTGTGCTCCCTTGTAGTGTGTCCTGTACTGTCTCTTCAAACAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCTGTGCTCCCTTGTAGTGTGTCCTGTACTGTCTCTTCAAACAAA  600

seq1  ACGTGTTGCTGCTTCACTGTTGTGTGCTCTTCAGTTCTTTCAATAACATA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTTGCTGCTTCACTGTTGTGTGCTCTTCAGTTCTTTCAATAACATA  650

seq1  CTAAGAACCTGGAAGTCCAAGTCCAGATAGCTAGTGGCAACCAGCAACAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACCTGGAAGTCCAAGTCCAGATAGCTAGTGGCAACCAGCAACAT  700

seq1  CCACCCGTTTCCTCTAGTTGGCTCTCCCCCTACTTTGGGCTCTGGGCTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCGTTTCCTCTAGTTGGCTCTCCCCCTACTTTGGGCTCTGGGCTTT  750

seq1  GTCAGGGATGGGTTTGCCCAGAGCCAAGTGTGGCTGAGCTCAGAGCTGGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGATGGGTTTGCCCAGAGCCAAGTGTGGCTGAGCTCAGAGCTGGC  800

seq1  CTGCTTCTCTTCTGCGTTGCCCTACAAGAATTC  825
      |||||||||||||||||||||||||||||||||
seq2  CTGCTTCTCTTCTGCGTTGCCCTACAAGAATTC  833