BAC Information

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BAC

Clone NameB6Ng01-105M22
Chromosome7 (Build37)
Map Location 50,939,345 - 51,070,493
singlet/doubletdoublet
Overlap geneKlk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7
Upstream geneEG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3
Downstream geneKlk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105M22.bB6Ng01-105M22.g
ACCDH913726DH913727
length288738
definitionDH913726|Mus musculus domesticus DNA, BAC clone: B6Ng01-105M22, 5' end.DH913727|Mus musculus domesticus DNA, BAC clone: B6Ng01-105M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,070,206 - 51,070,493)(50,939,345 - 50,940,074)
sequence
atactgtcatgttgatgacctgggttcatcattagagtttcttgttggaa
aagggtggggcttctgggcatttacatataatatccttactcagaaagtc
tattgattaaggctggtgagaaggagagtcttctctagggattgggtagg
tattcccttgagcagcaggaagctgactgtagccaagggagagggaactt
cctggttctcagcaagagaaatgtgtcttccaccaatcaacccttcagca
tacagcatagcatctgtcctgagaggtgagggtgttgg
gaattctctgccaaagtgagaggcagaactgtggttgggaggcgggactg
tgggcagcagttggagaccactcccagcttttgacctaagcagctgagga
gaggttgggttcaaatggaccacggagacagtacagacagaggaatcaga
gggtgtccaccaccatgaaggatgcctggtgttagcaggcatgagcagct
gtggatgctaacttagacatctagagatggtgctggagagatggcccagt
gattaagagcatgcattgctcttccagaggactggagttcagttcccagc
atccacctcaaggagcatacaatcacctgtaactacagttccaggacatg
caacacctttttttggattctgtagacacttcctttgccagatgaagtct
gagtaacgagagagccacgtgagctctagagccagagagggccactgagt
caggagggctgggactcagatttgtctcctcacctgtaaaatgtgtgtca
gcacgtgtgcagggaatcgagacctaacacagggaagaatcccactccca
cctccaaaagaaatcgtactttgtggaggcaggaagagcagaaattgcaa
gctttcatagagagtttaagaccaacctggatacttgagacattgtcaca
tacttgtgacattgttcattgtcatttttgtgacagtgaactccccagag
aagatgtgggggttaaagatatgtttctttacagactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51070206_51070493
seq2: B6Ng01-105M22.b_53_340 (reverse)

seq1  CCAACACCCTCACCTCTCAGGACAGATGCTATGCTGTATGCTGAAGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACCCTCACCTCTCAGGACAGATGCTATGCTGTATGCTGAAGGGTT  50

seq1  GATTGGTGGAAGACACATTTCTCTTGCTGAGAACCAGGAAGTTCCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTGGAAGACACATTTCTCTTGCTGAGAACCAGGAAGTTCCCTCTC  100

seq1  CCTTGGCTACAGTCAGCTTCCTGCTGCTCAAGGGAATACCTACCCAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTACAGTCAGCTTCCTGCTGCTCAAGGGAATACCTACCCAATCC  150

seq1  CTAGAGAAGACTCTCCTTCTCACCAGCCTTAATCAATAGACTTTCTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAGACTCTCCTTCTCACCAGCCTTAATCAATAGACTTTCTGAGT  200

seq1  AAGGATATTATATGTAAATGCCCAGAAGCCCCACCCTTTTCCAACAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATTATATGTAAATGCCCAGAAGCCCCACCCTTTTCCAACAAGAA  250

seq1  ACTCTAATGATGAACCCAGGTCATCAACATGACAGTAT  288
      ||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAATGATGAACCCAGGTCATCAACATGACAGTAT  288

seq1: chr7_50939345_50940074
seq2: B6Ng01-105M22.g_70_806

seq1  GAATTCTCTGCCAAAGTGAGAGGCAGAACTGTGGTTGGGAGGCGGGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCAAAGTGAGAGGCAGAACTGTGGTTGGGAGGCGGGACTG  50

seq1  TGGGCAGCAGTTGGAGACCACTCCCAGCTTTTGACCTAAGCAGCTGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGCAGTTGGAGACCACTCCCAGCTTTTGACCTAAGCAGCTGAGGA  100

seq1  GAGGTTGGGTTCAAATGGACCACGGAGACAGTACAGACAGAGGAATCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGGGTTCAAATGGACCACGGAGACAGTACAGACAGAGGAATCAGA  150

seq1  GGGTGTCCACCACCATGAAGGATGCCTGGTGTTAGCAGGCATGAGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCCACCACCATGAAGGATGCCTGGTGTTAGCAGGCATGAGCAGCT  200

seq1  GTGGATGCTAACTTAGACATCTAGAGATGGTGCTGGAGAGATGGCCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCTAACTTAGACATCTAGAGATGGTGCTGGAGAGATGGCCCAGT  250

seq1  GATTAAGAGCATGCATTGCTCTTCCAGAGGACTGGAGTTCAGTTCCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGAGCATGCATTGCTCTTCCAGAGGACTGGAGTTCAGTTCCCAGC  300

seq1  ATCCACCTCAAGGAGCATACAATCACCTGTAACTACAGTTCCAGGACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCTCAAGGAGCATACAATCACCTGTAACTACAGTTCCAGGACATG  350

seq1  CAACACCTTTTTTTGGATTCTGTAGACACTTCCTTTGCCAGATGAAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCTTTTTTTGGATTCTGTAGACACTTCCTTTGCCAGATGAAGTCT  400

seq1  GAGTAACGAGAGAGCCACGTGAGCTCTAGAGCCAGAGAGGGCCACTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACGAGAGAGCCACGTGAGCTCTAGAGCCAGAGAGGGCCACTGAGT  450

seq1  CAGGAGGGCTGGGACTCAGATTTGTCTCCTCACCTGTAAAATGTGTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGCTGGGACTCAGATTTGTCTCCTCACCTGTAAAATGTGTGTCA  500

seq1  GCACGTGTGCAGGGAATCGAGACCTAACACAGGGAAGAATCCCACTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTGTGCAGGGAATCGAGACCTAACACAGGGAAGAATCCCACTCCCA  550

seq1  CCTCCAAAAGAAATCGTAC-TTGTGGAGGCAGGAAGAGCAG-AATTGCAA  598
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  CCTCCAAAAGAAATCGTACTTTGTGGAGGCAGGAAGAGCAGAAATTGCAA  600

seq1  GC-TTCATAGAGAGTTTAAGACCAACCTGGATACTTGAGACATTGTCACA  647
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATAGAGAGTTTAAGACCAACCTGGATACTTGAGACATTGTCACA  650

seq1  TACTTGTGACATTGTTCATTGTCA-TTTTGTGACAGTGAAC-CCCCAGAG  695
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  TACTTGTGACATTGTTCATTGTCATTTTTGTGACAGTGAACTCCCCAGAG  700

seq1  AAGATGTGGGGG-TCAAGATATG-TTCTTTACAGACT  730
      |||||||||||| | |||||||| |||||||||||||
seq2  AAGATGTGGGGGTTAAAGATATGTTTCTTTACAGACT  737