BAC Information

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BAC

Clone NameB6Ng01-105O07
Chromosome10 (Build37)7 (Build37)
Map Location 104,053,656 - 104,054,36361,583,804 - 61,584,774
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105O07.bB6Ng01-105O07.g
ACCDH913790DH913791
length1,056967
definitionDH913790|Mus musculus domesticus DNA, BAC clone: B6Ng01-105O07, 5' end.DH913791|Mus musculus domesticus DNA, BAC clone: B6Ng01-105O07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,656 - 104,054,363)(61,583,804 - 61,584,774)
sequence
gaattctcacctgaggaataccaaatggcagagaaacacctgaaaaatgt
tcaacatccttaatcatgagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagca
gatgctgacaaggatgtggagaaagaggaacactcctccatttttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggtggttgctcag
aaaattgaacatagtactaccagagattccagcaacacctcttctgggca
tatatccagaagatgtcccaacctgtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctgtaacgaacccagatg
cccctcaacagaggaatggagacataaaatgtggaacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggaaggtatcatcctgagtgaggtacccaatcacaaagg
aactcacacaatatgtactcactgataagtagatattagcccagaaactt
aggatacacaagatataagatacaatttgctaaatgcatgaaactcaaga
agaaggaagacctaagtgtagacactttgccccttcttagaattgggaac
aaaacacctatggaaggagttacagagacaaaatttggagctgtgatgaa
aggatggaccatctattgattgccatatccagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttgctgaaag
ggcccagatatagctgtctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgctcacagtgaagaatagaaaattactggcctctgtgaa
aacatgaatttttacctcggagcccacccctcccatctagagatgtaaca
ctcctaaacttttcaccccaaactctcaccctaaagttcgaaccctccca
ctaaaa
gaattcaaatattttcatttgtccttacatccatgttattttgaaacaaa
agacatttggggagaatgaaagatgtctgtatgttgataagtattagaaa
gattgattttaaaaagtcttagtagtgtcacatacacagttctccttaat
gaccttgagagcacttaaagaaatgaaaacacctatttacttcatttgaa
ctgttttctgactactttgtaaaatttagaaacagtttcataaaatacat
tttcagaggttctcagtttgcttttgagatattttaatataaaaactcaa
taatagcccaggagttaaaatcatctgttatcaaacctgataaccttagt
ttgttcttcagggcccacatggtagaagagtataaactcaaactcccaca
tactgtcctctgatgacattttacatttctctgttgctgtttatttctct
ctgtctctctctctctgactctgtctctgtctctgtctctgtctctttct
ctgcctctgtctctgtctctctctctctctctctctctctgtctctccct
ctctctctctctctctctctgcctccctccctctttttctctctccccct
gccccaatggttctgttatgtagcccttgctggattgcacttgtccaaga
tggctgcaactcacacccatctaattatctcagcttcatgaatgcagtgt
ttctggcatctgccatcatgcttgtcttataatcttttagatttccctaa
gaatcatctctcaagtttttatattttttttgagtatgagaagacaaaaa
tggttcaggcttaactaaggttgggtatctcagtggaaatgacattaaca
ttttcacttttattttcacatagatttggtagagatgctgactgtcaatc
tgttgtattcaattaggaattatgtcaatgccttatttaatgttcttaat
taacagcaccttgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053656_104054363
seq2: B6Ng01-105O07.b_49_543 (reverse)

seq1  CTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATA  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAA  150
                                                        
seq2  --------------------------------------------------  0

seq1  TAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATA  200
                                           ||  ||||| |||
seq2  ------------------------------------CTAGGAATTTCATA  14

seq1  AGTAAATAATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTT  250
      | |  ||  |||  |||||   |  | | ||  |||              
seq2  AATTCATTCTTT--TTAAT---AGCTGAGTA--GTA--------------  43

seq1  AATAGCTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGT  300
           ||||||||||||||||| ||||||||| ||| || ||||||||||
seq2  -----CTCCATTGTGTAAATGTTCCACATTTTATGTCTCCATTCCTCTGT  88

seq1  TGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTG  350
      |||||||||||||||||| || ||||| ||||||||||||||||||||||
seq2  TGAGGGGCATCTGGGTTCGTTACAGCTTCTGGCTATTATAAATAAGGCTG  138

seq1  CTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCT  400
      ||||||| ||||||||||||||||||||||||| ||||||| ||||||||
seq2  CTATGAACATAGTGGAGCATGTGTCCTTCTTACAGGTTGGGACATCTTCT  188

seq1  GGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTC  450
      ||||||||||||||||||||| ||||||||  ||| ||||||||||||| 
seq2  GGATATATGCCCAGAAGAGGTGTTGCTGGAATCTCTGGTAGTACTATGTT  238

seq1  CAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCC  500
      |||||||||||  |||| |||||| |||||||||||||||||||||||| 
seq2  CAATTTTCTGAGCAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCT  288

seq1  TGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGC  550
      |||||||||||||| |||||||||||||||||||||||||||||||| | 
seq2  TGCAATCCCACCAAAAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGT  338

seq1  CAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGT  600
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGCATCTGCTGTCACCTGAATTTTTCATCTTAGCCATTCTGACTGGTGT  388

seq1  GAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGG  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTCATGATTAAGG  438

seq1  ATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGT  700
      |||||||||| ||||||||||| |||||||||||| ||||||||||||||
seq2  ATGTTGAACA-TTTTTCAGGTGTTTCTCTGCCATTTGGTATTCCTCAGGT  487

seq1  GAGAATTC  708
      ||||||||
seq2  GAGAATTC  495

seq1: chr7_61583804_61584774
seq2: B6Ng01-105O07.g_69_1035

seq1  GAATTCAAATATTTTCATTTGTCCTTACATCCATGTTATTTTGAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATTTTCATTTGTCCTTACATCCATGTTATTTTGAAACAAA  50

seq1  AGACATTTGGGGAGAATGAAAGATGTCTGTATGTTGATAAGTATTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTGGGGAGAATGAAAGATGTCTGTATGTTGATAAGTATTAGAAA  100

seq1  GATTGATTTTAAAAAGTCTTAGTAGTGTCACATACACAGTTCTCCTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATTTTAAAAAGTCTTAGTAGTGTCACATACACAGTTCTCCTTAAT  150

seq1  GACCTTGAGAGCACTTAAAGAAATGAAAACACCTATTTACTTCATTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAGAGCACTTAAAGAAATGAAAACACCTATTTACTTCATTTGAA  200

seq1  CTGTTTTCTGACTACTTTGTAAAATTTAGAAACAGTTTCATAAAATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTGACTACTTTGTAAAATTTAGAAACAGTTTCATAAAATACAT  250

seq1  TTTCAGAGGTTCTCAGTTTGCTTTTGAGATATTTTAATATAAAAACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGGTTCTCAGTTTGCTTTTGAGATATTTTAATATAAAAACTCAA  300

seq1  TAATAGCCCAGGAGTTAAAATCATCTGTTATCAAACCTGATAACCTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCCCAGGAGTTAAAATCATCTGTTATCAAACCTGATAACCTTAGT  350

seq1  TTGTTCTTCAGGGCCCACATGGTAGAAGAGTATAAACTCAAACTCCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTCAGGGCCCACATGGTAGAAGAGTATAAACTCAAACTCCCACA  400

seq1  TACTGTCCTCTGATGACATTTTACATTTCTCTGTTGCTGTTTATTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCCTCTGATGACATTTTACATTTCTCTGTTGCTGTTTATTTCTCT  450

seq1  CTGTCTCTCTCTCTCTGACTCTGTCTCTGTCTCTGTCTCTGTCTCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTCTCTCTGACTCTGTCTCTGTCTCTGTCTCTGTCTCTTTCT  500

seq1  CTGCCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCCCT  550

seq1  CTCTCTCTCTCTCTCTCTCTGCCTCCCTCCCTCTTTTTCTCTCTCCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTGCCTCCCTCCCTCTTTTTCTCTCTCCCCCT  600

seq1  GCCCCAATGGTTCTGTTATGTAGCCCTTGCTGGATTGCACTTGTCCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAATGGTTCTGTTATGTAGCCCTTGCTGGATTGCACTTGTCCAAGA  650

seq1  TGGCTGCAACTCACACCCATCTAATTATCTCAGCTTCATGAATGCAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCAACTCACACCCATCTAATTATCTCAGCTTCATGAATGCAGTGT  700

seq1  TTCTGGCATCTGCCATCATGCTTGTCTTATAATCTTTTAGATTTCCCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCATCTGCCATCATGCTTGTCTTATAATCTTTTAGATTTCCCTAA  750

seq1  GAATCATCTCTCAAGTTTTTATA-TTTTTTTGAGTATGAGAAGACAAAAA  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAATCATCTCTCAAGTTTTTATATTTTTTTTGAGTATGAGAAGACAAAAA  800

seq1  TGGTTCAGGCTTAACTAAGGTT-GGTATCTCAGTGGAAATGAACATAACA  848
      |||||||||||||||||||||| |||||||||||||||||||   |||||
seq2  TGGTTCAGGCTTAACTAAGGTTGGGTATCTCAGTGGAAATGACATTAACA  850

seq1  ATTTCACTTTTATTTTCACATAGATTTGGTAGAGATGCTGACTGTCAATT  898
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTTCACTTTTATTTTCACATAGATTTGGTAGAGATGCTGACTGTCAA-T  899

seq1  CTGTTGTATTCAATTAGGAATTATGTTCAAATGCCTTATTTTAATGTTCT  948
      ||||||||||||||||||||||||||   ||||||||| |||||||||||
seq2  CTGTTGTATTCAATTAGGAATTATGT--CAATGCCTTA-TTTAATGTTCT  946

seq1  TGAATTTAACAGCACCTTGATAT  971
      |  | ||||||||||||||||||
seq2  T--AATTAACAGCACCTTGATAT  967