BAC Information

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BAC

Clone NameB6Ng01-105P16
Chromosome7 (Build37)
Map Location 92,060,556 - 92,061,639
singlet/doubletsinglet
Overlap genenone
Upstream gene9930013L23Rik, 2210412D01Rik, Arnt2, LOC100039239, Fah, Zfand6, 2610206C17Rik, EG620480, Olfr291, LOC666276
Downstream geneOlfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105P16.bB6Ng01-105P16.g
ACCDH913854DH913855
length1,1841,072
definitionDH913854|Mus musculus domesticus DNA, BAC clone: B6Ng01-105P16, 5' end.DH913855|Mus musculus domesticus DNA, BAC clone: B6Ng01-105P16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcatagatttttggggggatcacttatgtactctgtcataac
atctacaaatactgatatcttcacaccctcctttccaagttgtattattt
taatctgattttgttgcctaatttctatggctagaacttcaagtactata
tttaatagatggggaagaatggacagccttgtcttgtccctgattttagt
gggattgcttcaagtttctctctatttagcttgatgttggctgttggctt
gctgtatattgcatttattatatttacatgtaccttttgatttccagatt
tctctaatacttttggcatgaagggctcttgtatttcatcaaaggcattt
taagaatctaatgagatgatcatggtgtttttttttcttttttgagtttg
tttatatagaatattatattgatggatacccatatattgaaacatctctg
catcactggaatgaagccttcttcatgatagtgaatgatcattttgatgt
gttattggattcagttttgcataaattttattgagtatgtttacatcgat
attcatgagggatattggttttaaggttttttttttttcttttttggctc
tttatgtggtgtatgtatcagtttaatcatagattcatagaatgtactga
gtagttttcctcttgtttcttttctatgaaagagtttgaaaagtaatgat
aggatttttttttcttggtaggcttttactaactgattcaatttccttag
ggattatgggactgtttaatggttttgtctgatcctgatttaaattttgg
tacctggtatctgtctagaacgttatccatttcatctagattttccagtt
ttattgagtataggcttttgtagtagggtttagtaattttttaatttttt
catttttctgtatattttgtctcccattttcatttgattttaattaatct
gagtatgattcttctatgccctctgattagtctggctgagggtttatcta
tcttgttgattttctcaagaaaccaaaactggttttgctgattcttgagt
agaatctctttcttcagccctaagtaataactaattgtctacactcctct
taggggatttccttcttattgtttttgagcttttcggaatgtgctgttaa
gggtggagggcatatgcccctctctggaaactct
gaattctacaggatcaccaacagagtcaactaacctggacacttggaggt
ctcagagtatgaaccagtaaagtgttggacctatgccttcctgcttctat
gtagcagatgtgcaacttgactttcctgtgggtcctgaactactagaaca
tgggttatcccaaaagttgttgcctgtatattggatatgttcttctagcc
agactgtcttgtttgatgtcagtgggaggagagagtatgtacctatgctt
gcaaagatttgaagtggcagggtggggggaatacttaggggtgctcccct
tggttggtagaaatagggagggaaatatgagaaggattatgggagcaggt
gagaggggcaggtgcagcaatctggatgtaaagtgaacaagtaagaaaat
taaatttaaagaaataataaaaagaatgcagttaaaaagtttcatattca
aatgggtttgtgtctatgttcacagcagttctctcatgttgatggcacat
agttttcataagatatttttgtgctaataaatatatatagtaatattttt
gctcttttataaagagattatttacagaaaatgtgatgatatgttcaatg
atagatttttgtaatcattgtaatttttgtagtttcctatcaccaattat
cacctttactttggccatatgattactataaaactttttattatagtctg
taaagcaagttcaaacttttacaccagggtaagttattgttatttacaga
aggcactattgaaaaccacaaaataaatatcttatcacagagtttactat
tggccaagttcattacaggtggtccatgggcttttacaagggaatgaaaa
tggcactcctgtacatagaattattttaaaaccaaatatcaaattaatta
gtttgtgtcccttattcctaactggtagtaatgtagatattctccctaga
gtcttatatcctgcttccctagagaggaatggattatataattatgacta
accctagttgtgagtcctagacaggtgttaattgggttttacttactgat
gcaaatttgctcgatcactact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_92060556_92061639
seq2: B6Ng01-105P16.g_68_1139

seq1  GAATTCTACAGGATCACCAACAGAGTCAACTAACCTGGACACTTGGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGGATCACCAACAGAGTCAACTAACCTGGACACTTGGAGGT  50

seq1  CTCAGAGTATGAACCAGTAAAGTGTTGGACCTATGCCTTCCTGCTTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGTATGAACCAGTAAAGTGTTGGACCTATGCCTTCCTGCTTCTAT  100

seq1  GTAGCAGATGTGCAACTTGACTTTCCTGTGGGTCCTGAACTACTAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGATGTGCAACTTGACTTTCCTGTGGGTCCTGAACTACTAGAACA  150

seq1  TGGGTTATCCCAAAAGTTGTTGCCTGTATATTGGATATGTTCTTCTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATCCCAAAAGTTGTTGCCTGTATATTGGATATGTTCTTCTAGCC  200

seq1  AGACTGTCTTGTTTGATGTCAGTGGGAGGAGAGAGTATGTACCTATGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCTTGTTTGATGTCAGTGGGAGGAGAGAGTATGTACCTATGCTT  250

seq1  GCAAAGATTTGAAGTGGCAGGGTGGGGGGAATACTTAGGGGTGCTCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGATTTGAAGTGGCAGGGTGGGGGGAATACTTAGGGGTGCTCCCCT  300

seq1  TGGTTGGTAGAAATAGGGAGGGAAATATGAGAAGGATTATGGGAGCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGTAGAAATAGGGAGGGAAATATGAGAAGGATTATGGGAGCAGGT  350

seq1  GAGAGGGGCAGGTGCAGCAATCTGGATGTAAAGTGAACAAGTAAGAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGCAGGTGCAGCAATCTGGATGTAAAGTGAACAAGTAAGAAAAT  400

seq1  TAAATTTAAAGAAATAATAAAAAGAATGCAGTTAAAAAGTTTCATATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAAAGAAATAATAAAAAGAATGCAGTTAAAAAGTTTCATATTCA  450

seq1  AATGGGTTTGTGTCTATGTTCACAGCAGTTCTCTCATGTTGATGGCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTTTGTGTCTATGTTCACAGCAGTTCTCTCATGTTGATGGCACAT  500

seq1  AGTTTTCATAAGATATTTTTGTGCTAATAAATATATATAGTAATATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCATAAGATATTTTTGTGCTAATAAATATATATAGTAATATTTTT  550

seq1  GCTCTTTTATAAAGAGATTATTTACAGAAAATGTGATGATATGTTCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTATAAAGAGATTATTTACAGAAAATGTGATGATATGTTCAATG  600

seq1  ATAGATTTTTGTAATCATTGTAATTTTTGTAGTTTCCTATCACCAATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTTTGTAATCATTGTAATTTTTGTAGTTTCCTATCACCAATTAT  650

seq1  CACCTTTACTTTGGCCATATGATTACTATAAAACTTTTTATTATAGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTACTTTGGCCATATGATTACTATAAAACTTTTTATTATAGTCTG  700

seq1  TAAAGCAAGTTCAAACTTTTACACCAGGGTAAGTTATTGTTATTTACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAGTTCAAACTTTTACACCAGGGTAAGTTATTGTTATTTACAGA  750

seq1  AGGCACTATTGAAAACCACAAAATAAATATCTTATCACAGAG-TTACTAT  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGCACTATTGAAAACCACAAAATAAATATCTTATCACAGAGTTTACTAT  800

seq1  TGGCCAAGTTCATTACAGGTGGTCCATGGGCTATTACAA-GGAATGAAAA  848
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  TGGCCAAGTTCATTACAGGTGGTCCATGGGCTTTTACAAGGGAATGAAAA  850

seq1  TGGCACTCCTGTAACATAGAATTATTTTAAAACCAAATATCAAATTAATT  898
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGCACTCCTGT-ACATAGAATTATTTTAAAACCAAATATCAAATTAATT  899

seq1  AGTTTTGTGTCCC-TATTCCTAACTTGGTAGTAATGTAGATATTCTCCCT  947
      || |||||||||| |||||||||| |||||||||||||||||||||||||
seq2  AG-TTTGTGTCCCTTATTCCTAAC-TGGTAGTAATGTAGATATTCTCCCT  947

seq1  AGAGTTCTTATTATCCTGCTTCCCTAAGGAGAGAATGGGAATATATAAAT  997
      |||| ||||| |||||||||||||||  ||||| |  ||| ||||| |||
seq2  AGAG-TCTTA-TATCCTGCTTCCCTA--GAGAGGAATGGATTATAT-AAT  992

seq1  TATTGACTAACCCCTAG-TGTGAGTCCTAAGAACAAGTGTTAATTTGGTT  1046
      || ||||||| |||||| |||||||||||   ||| ||||||| |||| |
seq2  TA-TGACTAA-CCCTAGTTGTGAGTCCTA--GACAGGTGTTAA-TTGGGT  1037

seq1  TTTACCTACTGATGCAATATTTTGCTCGATCATCTACT  1084
      ||||| ||||||||||  | |||||||||||| |||||
seq2  TTTACTTACTGATGCA--AATTTGCTCGATCA-CTACT  1072