BAC Information

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BAC

Clone NameB6Ng01-106K24
Chromosome7 (Build37)
Map Location 146,273,143 - 146,409,201
singlet/doubletdoublet
Overlap geneDpysl4, Stk32c, LOC100038956, Lrrc27
Upstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik
Downstream genePwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106K24.bB6Ng01-106K24.g
ACCDH914353DH914354
length8651,070
definitionDH914353|Mus musculus domesticus DNA, BAC clone: B6Ng01-106K24, 5' end.DH914354|Mus musculus domesticus DNA, BAC clone: B6Ng01-106K24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,273,143 - 146,274,008)(146,408,112 - 146,409,201)
sequence
gaattcccattcatctagatagtgtatatcacagtattgcttgctccccc
aaatccggggaaccccagagtgcaaattctggtgcctgaaaataggagtc
taaataaggacccccagaactcaagatttctggctcagagattcctccta
agggctgagttatcctagatttttctgataatggctaggcagagagggga
agaggaggggtgtggtcctgagtaccagccccacgaagtgggtggctgtg
gtaggcctttgtagataccaatgctcagtgagactggttagtgagcactc
agacatttggagagagtttgtaaaagagctgcagccatgctaagtagagt
cagcaagctacttccacgacgggccagatgggaagtccattcagcttggg
ggccatgccatgtctatcttgcttgaggactcctgggcagggtgatttca
tggacaggaatggacctatgaacctcatccctagatgctgcaatgtggat
ttcacaaaacgtttacaagtcattcttttcgtcgtttcccccaaccagct
taaaaatcgtgtgtgggtagggggctgggtgatgtaggctgggcttagtt
gccaggcctttggaagactgtgtggtaatgacagaataggagaaccctga
gaattcagcccaacactaggcagtttggtcaaaacagtggagtatacaaa
gggctccctgtcgtccttgtaggctgataaggctctgcttggcactctct
cagctggttctcctggcctcacactggtgtataacagggctgaagctggc
ctggagtctggcttggcttgccacatggccacaggaatttgtggcatgta
ccaggttttcttgtt
gaattcactgtgtaaccaaggctcttctcagactcacagcaaacctcctg
tctcaggtcccaagtgctgggattacaagcacgagtcaccaaacctggtt
ggatcaacaatgtctaagaacgtctctgggatccactccccacccccgtc
tcaaggccaggtgaaaaccaaccgttgcatctgtatttgctcatgtgaat
gacagaccacatcgcggtctttccttcctcccatgttcatccatttggcc
accttcccccacattcccacttctaggcaagcttcatggccaactgataa
tgtcaagaggaccaagggaagatcttctcccaaagatagctgtccatctt
ttttaaatgcacagtgcttcagtgacacaatgacatgaagtcactcctgt
cctcgtgcttgctgcgtcccttcccttccagctgctcatgcctcctgcat
tttagtgactgcgattgggttgcatacagttggcttctgtgcttttaatc
tggcccgagtctctctgcctttttaatagcagagcaccactcaccacagg
aaactagctggagaatctctagttttgtataagccaaggagcaagctctg
ctaatctttgtaattaactgggctggtgtggaatcacccaggagacacca
ctggtgtgcctataaggtgtctccagagaggtttaactgaggggagggga
cctgtcctgagcctgggaggcgccatcccatggaacagggcccttgactg
agaagcagacaatgagcggcagcattccctgctctctgctttctgactca
acccagctgcacagtccactcacagtgaactctgccgtgccttctttacc
atgagcccaaacaattccttctgccttcaaccctgttcttgtcaggtatt
ggtcacagcagagagaaaaaacttaaacctcgctcacaggtgaatcatgc
cagaaaacactgttgtactgagtgacagctggacaccacaaatcaggcag
gcttaggataaggcagtcaatgtcgtagagagaggactgagtcaacccaa
tttccacctcaccagctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146273143_146274008
seq2: B6Ng01-106K24.b_45_909

seq1  GAATTCCCATTCATCTAGATAGTGTATATCACAGTATTGCTTGCTCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTCATCTAGATAGTGTATATCACAGTATTGCTTGCTCCCCC  50

seq1  AAATCCGGGGAACCCCAGAGTGCAAATTCTGGTGCCTGAAAATAGGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGGGGAACCCCAGAGTGCAAATTCTGGTGCCTGAAAATAGGAGTC  100

seq1  TAAATAAGGACCCCCAGAACTCAAGATTTCTGGCTCAGAGATTCCTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGGACCCCCAGAACTCAAGATTTCTGGCTCAGAGATTCCTCCTA  150

seq1  AGGGCTGAGTTATCCTAGATTTTTCTGATAATGGCTAGGCAGAGAGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGAGTTATCCTAGATTTTTCTGATAATGGCTAGGCAGAGAGGGGA  200

seq1  AGAGGAGGGGTGTGGTCCTGAGTACCAGCCCCACGAAGTGGGTGGCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGGGTGTGGTCCTGAGTACCAGCCCCACGAAGTGGGTGGCTGTG  250

seq1  GTAGGCCTTTGTAGATACCAATGCTCAGTGAGACTGGTTAGTGAGCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCCTTTGTAGATACCAATGCTCAGTGAGACTGGTTAGTGAGCACTC  300

seq1  AGACATTTGGAGAGAGTTTGTAAAAGAGCTGCAGCCATGCTAAGTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTGGAGAGAGTTTGTAAAAGAGCTGCAGCCATGCTAAGTAGAGT  350

seq1  CAGCAAGCTACTTCCACGACGGGCCAGATGGGAAGTCCATTCAGCTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCTACTTCCACGACGGGCCAGATGGGAAGTCCATTCAGCTTGGG  400

seq1  GGCCATGCCATGTCTATCTTGCTTGAGGACTCCTGGGCAGGGTGATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGCCATGTCTATCTTGCTTGAGGACTCCTGGGCAGGGTGATTTCA  450

seq1  TGGACAGGAATGGACCTATGAACCTCATCCCTAGATGCTGCAATGTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGGAATGGACCTATGAACCTCATCCCTAGATGCTGCAATGTGGAT  500

seq1  TTCACAAAACGTTTACAAGTCATTCTTTTCGTCGTTTCCCCCAACCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAACGTTTACAAGTCATTCTTTTCGTCGTTTCCCCCAACCAGCT  550

seq1  TAAAAATCGTGTGTGGGTAGGGGGCTGGGTGATGTAGGCTGGGCTTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCGTGTGTGGGTAGGGGGCTGGGTGATGTAGGCTGGGCTTAGTT  600

seq1  GCCAGGCCTTTGGAAGACTGTGTGGTAATGACAGAATAGGAGAACCCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCTTTGGAAGACTGTGTGGTAATGACAGAATAGGAGAACCCTGA  650

seq1  GAATTCAGCCCAACACTAGGCAG-TTGGTCAAAACAGTGGAGTATACAAA  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAATTCAGCCCAACACTAGGCAGTTTGGTCAAAACAGTGGAGTATACAAA  700

seq1  GGGCTCCCTGTCGTCCTTGTAGGCTGATAAGGCTCTGCTTGGCACTCTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCCTGTCGTCCTTGTAGGCTGATAAGGCTCTGCTTGGCACTCTCT  750

seq1  CAGCTGGTTCTCCTGGCCTCACACTGGTGTATAACAGGGCTGAAGCTGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGTTCTCCTGGCCTCACACTGGTGTATAACAGGGCTGAAGCTGGC  800

seq1  CTGGAGGTCTGGCTTGGC-TGCCACATGGGCCACAGGAATTTGGGGCATG  848
      ||||| |||||||||||| |||||||| ||||||||||||||| ||||||
seq2  CTGGA-GTCTGGCTTGGCTTGCCACAT-GGCCACAGGAATTTGTGGCATG  848

seq1  TAGCCAGGTTTTCTTGTT  866
      || |||||||||||||||
seq2  TA-CCAGGTTTTCTTGTT  865

seq1: chr7_146408112_146409201
seq2: B6Ng01-106K24.g_68_1137 (reverse)

seq1  TTCAGCTTTGTTGAGTTGGAAATTTGGGGTTTGACTTCAGTCCCTCTTCT  50
      ||||||  || |||| ||||||||   || ||||| ||||| |||| |||
seq2  TTCAGC--TGGTGAGGTGGAAATT---GGGTTGAC-TCAGT-CCTC-TCT  42

seq1  CTAACGGACATTTGAACTGCCCTTTATCCTAAAGCCTGCCTTGATTTGTG  100
      |||   ||||||   ||||||  ||||||| ||||||||| |||||||||
seq2  CTA--CGACATT--GACTGCC--TTATCCT-AAGCCTGCC-TGATTTGTG  84

seq1  GTGTCCAGCTTGTCACTCAGTACAACAGTGTTTTCTGGCATGATTCACCT  150
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAGC-TGTCACTCAGTACAACAGTGTTTTCTGGCATGATTCACCT  133

seq1  GTGGGCGAGGTTTAAGTTTTTTTCTTCTCTGCTGTGACCAAATACCTGAC  200
      ||| ||||||||||||||||||   |||||||||||||| ||||||||||
seq2  GTGAGCGAGGTTTAAGTTTTTT--CTCTCTGCTGTGACC-AATACCTGAC  180

seq1  AAGAACAGGGTTGAAGGCAGAAGGAATTGTTTGGGCTCATGGTAAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGGGTTGAAGGCAGAAGGAATTGTTTGGGCTCATGGTAAAGAAG  230

seq1  GCACGGCAGAGTTCACTGTGAGTGGACTGTGCAGCTGGGTTGAGTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGCAGAGTTCACTGTGAGTGGACTGTGCAGCTGGGTTGAGTCAGAA  280

seq1  AGCAGAGAGCAGGGAATGCTGCCGCTCATTGTCTGCTTCTCAGTCAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAGCAGGGAATGCTGCCGCTCATTGTCTGCTTCTCAGTCAAGGG  330

seq1  CCCTGTTCCATGGGATGGCGCCTCCCAGGCTCAGGACAGGTCCCCTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCCATGGGATGGCGCCTCCCAGGCTCAGGACAGGTCCCCTCCCC  380

seq1  TCAGTTAAACCTCTCTGGAGACACCTTATAGGCACACCAGTGGTGTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAAACCTCTCTGGAGACACCTTATAGGCACACCAGTGGTGTCTCC  430

seq1  TGGGTGATTCCACACCAGCCCAGTTAATTACAAAGATTAGCAGAGCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGATTCCACACCAGCCCAGTTAATTACAAAGATTAGCAGAGCTTGC  480

seq1  TCCTTGGCTTATACAAAACTAGAGATTCTCCAGCTAGTTTCCTGTGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGCTTATACAAAACTAGAGATTCTCCAGCTAGTTTCCTGTGGTGA  530

seq1  GTGGTGCTCTGCTATTAAAAAGGCAGAGAGACTCGGGCCAGATTAAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCTCTGCTATTAAAAAGGCAGAGAGACTCGGGCCAGATTAAAAGC  580

seq1  ACAGAAGCCAACTGTATGCAACCCAATCGCAGTCACTAAAATGCAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCCAACTGTATGCAACCCAATCGCAGTCACTAAAATGCAGGAGG  630

seq1  CATGAGCAGCTGGAAGGGAAGGGACGCAGCAAGCACGAGGACAGGAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCAGCTGGAAGGGAAGGGACGCAGCAAGCACGAGGACAGGAGTGA  680

seq1  CTTCATGTCATTGTGTCACTGAAGCACTGTGCATTTAAAAAAGATGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTCATTGTGTCACTGAAGCACTGTGCATTTAAAAAAGATGGACA  730

seq1  GCTATCTTTGGGAGAAGATCTTCCCTTGGTCCTCTTGACATTATCAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTTTGGGAGAAGATCTTCCCTTGGTCCTCTTGACATTATCAGTTG  780

seq1  GCCATGAAGCTTGCCTAGAAGTGGGAATGTGGGGGAAGGTGGCCAAATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGAAGCTTGCCTAGAAGTGGGAATGTGGGGGAAGGTGGCCAAATGG  830

seq1  ATGAACATGGGAGGAAGGAAAGACCGCGATGTGGTCTGTCATTCACATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATGGGAGGAAGGAAAGACCGCGATGTGGTCTGTCATTCACATGA  880

seq1  GCAAATACAGATGCAACGGTTGGTTTTCACCTGGCCTTGAGACGGGGGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATACAGATGCAACGGTTGGTTTTCACCTGGCCTTGAGACGGGGGTG  930

seq1  GGGAGTGGATCCCAGAGACGTTCTTAGACATTGTTGATCCAACCAGGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGATCCCAGAGACGTTCTTAGACATTGTTGATCCAACCAGGTTT  980

seq1  GGTGACTCGTGCTTGTAATCCCAGCACTTGGGACCTGAGACAGGAGGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTCGTGCTTGTAATCCCAGCACTTGGGACCTGAGACAGGAGGTTT  1030

seq1  GCTGTGAGTCTGAGAAGAGCCTTGGTTACACAGTGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGTCTGAGAAGAGCCTTGGTTACACAGTGAATTC  1070