BAC Information

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BAC

Clone NameB6Ng01-107B07
Chromosome7 (Build37)
Map Location 114,387,427 - 114,564,291
singlet/doubletdoublet
Overlap geneSyt9
Upstream geneLOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik
Downstream geneOlfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107B07.bB6Ng01-107B07.g
ACCDH914647DH914648
length836696
definitionDH914647|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B07, 5' end.DH914648|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,563,456 - 114,564,291)(114,387,427 - 114,388,122)
sequence
gaattcctggcacgggtatgacatttgataatgatgaggtgcatctgcag
ccacttgctgtgcaaaccttgacttatgtcagggtaggctgtggcctata
aactgtggagggtgctaaagtcttctaggttttgtgtgtgtgaatgtgtg
tgtgtgtgtgtgtgtgtgtttacagtcattatgaacagcaagagtaaact
tttcatatttacacaaagacaccaggtgagttaacagtacttcagaacac
ctgccaggatgccagagagcaacagtggcctgtgtgacctcaccagcctc
cagtgtaaccatctgaatgtccattaccaatagctcaacgtgtcctctag
acaccgtgtgggtgcttttttaccaaaaagaagtatcttacaaagaagac
tctccatgttcactcccatctccttagaacttgacctcagcaaagggctg
tggggatggatgagtcagcctagaactgcagaatatttttaaagaggtaa
ttcatttctcaagttaggtggtagatatgtggtcaattgctttataagct
ttaaattacacatatattcattacacatattcattggcatttaggtatat
tttaaagtaaagatggaaaaaatgatgataaaatataagatgtattttct
aaaaagtaagaatagtgtaattggttcttttgtctatgggtcaaaaaaaa
atttcagatgatggttcagggcttgaaagaggcaaatgctacagttctct
gaaggctggtagtgatgcaaacaagaggctgtttatgaaagtgtagaaga
gctggatggttattttctcaaggacacaatgctctg
gaattctcttctgacaagttgacttgcttgtaaatgttaactttaatata
aatgtatgtagtagtatggcagttgcgtttctttatcttagctagttcac
aacaaccacagacagaccaaggtttaatctcatgcttcacctcagtgtcc
gggcaatcaactgattaatatttatcccctcagctaatatggctacctcc
cagccccggatctcacaatacttgcatttagggctttccatgctcctgct
gaactctcaagaagctttcctccttcccctcatggcagatctgaatctcc
tttcctctctctctccctccatttcctggctgatagaagttctaacctat
cctctcttctgcccagccactgggtgatcagcgttttgactcagtaggta
tacagtgggaatgagggcttcagattgtggggattatcaggcggtgttgc
tgagccagggatcacagtttgagaaacacagccctatgatataatctgtg
tggagaaaaaccattatatgtgcttgtttctcttagtttgcccattttat
gaatagtaattattttccctagcaacctccagaggtgatcagtgactttt
ttttaatttagggtggtaaactcaagtctaaaaacaaaggaaataaacat
atctgataaatttagtttctgtagtattggggttttgggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114563456_114564291
seq2: B6Ng01-107B07.b_46_881 (reverse)

seq1  CAGAGCATTGTGTCCTTGAGAAAAT-ACCATCCAGCTCTTACTACACTTT  49
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  CAGAGCATTGTGTCCTTGAGAAAATAACCATCCAGCTCTT-CTACACTTT  49

seq1  CATAAACAGCCTCTTGTTTGCATCACTACCAGCCTTCAGAGAACTGTAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACAGCCTCTTGTTTGCATCACTACCAGCCTTCAGAGAACTGTAGC  99

seq1  ATTTGCCTCTTTCAAGCCCTGAACCATCATCTGAAATTTTTTTTTGACCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTCTTTCAAGCCCTGAACCATCATCTGAAATTTTTTTTTGACCC  149

seq1  ATAGACAAAAGAACCAATTACACTATTCTTACTTTTTAGAAAATACATCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAAAAGAACCAATTACACTATTCTTACTTTTTAGAAAATACATCT  199

seq1  TATATTTTATCATCATTTTTTCCATCTTTACTTTAAAATATACCTAAATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTATCATCATTTTTTCCATCTTTACTTTAAAATATACCTAAATG  249

seq1  CCAATGAATATGTGTAATGAATATATGTGTAATTTAAAGCTTATAAAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAATATGTGTAATGAATATATGTGTAATTTAAAGCTTATAAAGCA  299

seq1  ATTGACCACATATCTACCACCTAACTTGAGAAATGAATTACCTCTTTAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACCACATATCTACCACCTAACTTGAGAAATGAATTACCTCTTTAAA  349

seq1  AATATTCTGCAGTTCTAGGCTGACTCATCCATCCCCACAGCCCTTTGCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTGCAGTTCTAGGCTGACTCATCCATCCCCACAGCCCTTTGCTG  399

seq1  AGGTCAAGTTCTAAGGAGATGGGAGTGAACATGGAGAGTCTTCTTTGTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGTTCTAAGGAGATGGGAGTGAACATGGAGAGTCTTCTTTGTAA  449

seq1  GATACTTCTTTTTGGTAAAAAAGCACCCACACGGTGTCTAGAGGACACGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTCTTTTTGGTAAAAAAGCACCCACACGGTGTCTAGAGGACACGT  499

seq1  TGAGCTATTGGTAATGGACATTCAGATGGTTACACTGGAGGCTGGTGAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTATTGGTAATGGACATTCAGATGGTTACACTGGAGGCTGGTGAGG  549

seq1  TCACACAGGCCACTGTTGCTCTCTGGCATCCTGGCAGGTGTTCTGAAGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGGCCACTGTTGCTCTCTGGCATCCTGGCAGGTGTTCTGAAGTA  599

seq1  CTGTTAACTCACCTGGTGTCTTTGTGTAAATATGAAAAGTTTACTCTTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAACTCACCTGGTGTCTTTGTGTAAATATGAAAAGTTTACTCTTGC  649

seq1  TGTTCATAATGACTGTAAACACACACACACACACACACACACATTCACAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATAATGACTGTAAACACACACACACACACACACACACATTCACAC  699

seq1  ACACAAAACCTAGAAGACTTTAGCACCCTCCACAGTTTATAGGCCACAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACCTAGAAGACTTTAGCACCCTCCACAGTTTATAGGCCACAGC  749

seq1  CTACCCTGACATAAGTCAAGGTTTGCACAGCAAGTGGCTGCAGATGCACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTGACATAAGTCAAGGTTTGCACAGCAAGTGGCTGCAGATGCACC  799

seq1  TCATCATTATCAAATGTCATACCCGTGCCAGGAATTC  836
      |||||||||||||||||||||||||||||||||||||
seq2  TCATCATTATCAAATGTCATACCCGTGCCAGGAATTC  836

seq1: chr7_114387427_114388122
seq2: B6Ng01-107B07.g_67_762

seq1  GAATTCTCTTCTGACAAGTTGACTTGCTTGTAAATGTTAACTTTAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTGACAAGTTGACTTGCTTGTAAATGTTAACTTTAATATA  50

seq1  AATGTATGTAGTAGTATGGCAGTTGCGTTTCTTTATCTTAGCTAGTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGTAGTAGTATGGCAGTTGCGTTTCTTTATCTTAGCTAGTTCAC  100

seq1  AACAACCACAGACAGACCAAGGTTTAATCTCATGCTTCACCTCAGTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCACAGACAGACCAAGGTTTAATCTCATGCTTCACCTCAGTGTCC  150

seq1  GGGCAATCAACTGATTAATATTTATCCCCTCAGCTAATATGGCTACCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATCAACTGATTAATATTTATCCCCTCAGCTAATATGGCTACCTCC  200

seq1  CAGCCCCGGATCTCACAATACTTGCATTTAGGGCTTTCCATGCTCCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCGGATCTCACAATACTTGCATTTAGGGCTTTCCATGCTCCTGCT  250

seq1  GAACTCTCAAGAAGCTTTCCTCCTTCCCCTCATGGCAGATCTGAATCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTCAAGAAGCTTTCCTCCTTCCCCTCATGGCAGATCTGAATCTCC  300

seq1  TTTCCTCTCTCTCTCCCTCCATTTCCTGGCTGATAGAAGTTCTAACCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTCTCTCTCCCTCCATTTCCTGGCTGATAGAAGTTCTAACCTAT  350

seq1  CCTCTCTTCTGCCCAGCCACTGGGTGATCAGCGTTTTGACTCAGTAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTCTGCCCAGCCACTGGGTGATCAGCGTTTTGACTCAGTAGGTA  400

seq1  TACAGTGGGAATGAGGGCTTCAGATTGTGGGGATTATCAGGCGGTGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGGAATGAGGGCTTCAGATTGTGGGGATTATCAGGCGGTGTTGC  450

seq1  TGAGCCAGGGATCACAGTTTGAGAAACACAGCCCTATGATATAATCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGGGATCACAGTTTGAGAAACACAGCCCTATGATATAATCTGTG  500

seq1  TGGAGAAAAACCATTATATGTGCTTGTTTCTCTTAGTTTGCCCATTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAAACCATTATATGTGCTTGTTTCTCTTAGTTTGCCCATTTTAT  550

seq1  GAATAGTAATTATTTTCCCTAGCAACCTCCAGAGGTGATCAGTGACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTAATTATTTTCCCTAGCAACCTCCAGAGGTGATCAGTGACTTTT  600

seq1  TTTTAATTTAGGGTGGTAAACTCAAGTCTAAAAACAAAGGAAATAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTAGGGTGGTAAACTCAAGTCTAAAAACAAAGGAAATAAACAT  650

seq1  ATCTGATAAATTTAGTTTCTGTAGTATTGGGGTTTTGGGGGGGGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATAAATTTAGTTTCTGTAGTATTGGGGTTTTGGGGGGGGGG  696