BAC Information

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BAC

Clone NameB6Ng01-107D01
Chromosome7 (Build37)
Map Location 57,656,121 - 57,657,152
singlet/doubletsinglet
Overlap geneNell1
Upstream gene5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5
Downstream gene4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107D01.bB6Ng01-107D01.g
ACCDH914723DH914724
length1,1821,145
definitionDH914723|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D01, 5' end.DH914724|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctatagcaggatatagagccctttggaaattttccaagcag
aggaatagcttggtcctagagtgtatctaattctaactttttgaagaacc
tccactctgaaggggtgactacaagtttgcatccccattacagtgaataa
gtgtttctcttctctcataaccacagcaatttgtatttttgatcttaaac
attatgactagaataagatgaaatctcaaagctgttttgatataaacttc
tgtgatagctaatgaggttgagccatcaaccatttgtatttctcagccat
ttgcattttttttaaacaaatgaactctctagttagttccctgcacacat
tttaaattttctttcttgctgtttagtttttcggttctttgtatattcta
gacactaactctctgtcagatgtaaagtctcatgatgtcctgtttattgg
ttgttggtcttaatatctgtgatactagggtcctgtttagaaagatattt
cctatgcccttaagttcagttgtatttcccatttagtcatcgaacagatt
cagggtatcatgtcttctgttgaggtctttgatccatttgaagttgaggt
ttgtgcactgtcaaagatatagtttcatttttctacatgtgacaatccac
ttgtcccagaaccatttgttgaaaataagaaagcaaaacaacaacaacaa
caacagtcatcgtcagtacagatgaccatcaggtggtactacgtgaggca
gttagcagaagtagagtggaattgacactgctgatgggctgtcgatggca
gtgatgggtgggttagacacaatgggcaaagtaggtcttgccatagagga
gtgatgaacaaagtcttaaaggagataagagagttagagcagctacatct
tgagcacttaggttccaggccagtgaaaggcctaaaatcagaatggtcct
ggcatagtcaggaacagcagaaagccactcgagcagagctgtgagatcat
ggacatagcagagagagcagggtggagatgccgggtctcagtgctgtggc
tttactctgatgagctcttcatctgaagaatctgagcgagacattcttct
gagagtctcactatgtctcctgtgaatgacttatagagaagcgaaccatt
gcgaacactgcttggtgcagttcattatccag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaaaccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaagtggga
acaaaacacccatggaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaatcctgacaccattgcatacactagcaagattttactgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
atgaggagctagagaaagtacccaaggagctaaagggatcttcaccctat
agtgaacacattatgactacagtaccctgagctctgactctagctgcata
cgtatcaaagatgctagtcgcatcactgaaaaagtccatgacccgcgact
tggtgccgtacagttacgccagccaaaggggggagatggggtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57656121_57657152
seq2: B6Ng01-107D01.b_227_1228

seq1  TTGTATTTTTGATCTTAAACATTATGACTAGAATAAGATGAAATCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTTGATCTTAAACATTATGACTAGAATAAGATGAAATCTCAAA  50

seq1  GCTGTTTTGATATAAACTTCTGTGATAGCTAATGAGGTTGAGCCATCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTGATATAAACTTCTGTGATAGCTAATGAGGTTGAGCCATCAAC  100

seq1  CATTTGTATTTCTCAGCCATTTGCATTTTTTTTAAACAAATGAACTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTATTTCTCAGCCATTTGCATTTTTTTTAAACAAATGAACTCTCT  150

seq1  AGTTAGTTCCCTGCACACATTTTAAATTTTCTTTCTTGCTGTTTAGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTCCCTGCACACATTTTAAATTTTCTTTCTTGCTGTTTAGTTTT  200

seq1  TCGGTTCTTTGTATATTCTAGACACTAACTCTCTGTCAGATGTAAAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTCTTTGTATATTCTAGACACTAACTCTCTGTCAGATGTAAAGTCT  250

seq1  CATGATGTCCTGTTTATTGGTTGTTGGTCTTAATATCTGTGATACTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTCCTGTTTATTGGTTGTTGGTCTTAATATCTGTGATACTAGGG  300

seq1  TCCTGTTTAGAAAGATATTTCCTATGCCCTTAAGTTCAGTTGTATTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTAGAAAGATATTTCCTATGCCCTTAAGTTCAGTTGTATTTCCC  350

seq1  ATTTAGTCATCGAACAGATTCAGGGTATCATGTCTTCTGTTGAGGTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTCATCGAACAGATTCAGGGTATCATGTCTTCTGTTGAGGTCTTT  400

seq1  GATCCATTTGAAGTTGAGGTTTGTGCACTGTCAAAGATATAGTTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATTTGAAGTTGAGGTTTGTGCACTGTCAAAGATATAGTTTCATTT  450

seq1  TTCTACATGTGACAATCCACTTGTCCCAGAACCATTTGTTGAAAATAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATGTGACAATCCACTTGTCCCAGAACCATTTGTTGAAAATAAGA  500

seq1  AAGCAAAACAACAACAACAACAACAGTCATCGTCAGTACAGATGACCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAACAACAACAACAACAACAGTCATCGTCAGTACAGATGACCATC  550

seq1  AGGTGGTACTACGTGAGGCAGTTAGCAGAAGTAGAGTGGGAATTGACACT  600
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGTGGTACTACGTGAGGCAGTTAGCAGAAGTAGAGT-GGAATTGACACT  599

seq1  GCTGATGGGCTGTCGATGGCAGTGATGGGTGGGTTAGACACAATGGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGGGCTGTCGATGGCAGTGATGGGTGGGTTAGACACAATGGGCAA  649

seq1  AGTAGGTCTTGCCATAGAGGAGTGATGAACAAAGTCTTAAAGGAGATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTCTTGCCATAGAGGAGTGATGAACAAAGTCTTAAAGGAGATAAG  699

seq1  AGAGTTAGAGCAGCTACAATCTTGAGCACTTAGGTTCCAGGCCAGTGAAA  750
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  AGAGTTAGAGCAGCTAC-ATCTTGAGCACTTAGGTTCCAGGCCAGTG-AA  747

seq1  AGGCCTAAAATCAGAAATGGTCCTGGCATAGTCAGGGAACAGGCAGAAAG  800
      |||||||||||||| ||||||||||||||||||| |||||| ||||||||
seq2  AGGCCTAAAATCAG-AATGGTCCTGGCATAGTCA-GGAACA-GCAGAAAG  794

seq1  CCACTCGAGCAGAGCTGTGAGATCATGGAACAATAGCAGAAGAGAAGCAG  850
      |||||||||||||||||||||||||||||   ||||||| |||| |||| 
seq2  CCACTCGAGCAGAGCTGTGAGATCATGGA--CATAGCAG-AGAG-AGCA-  839

seq1  GGGTGGAAGATGCCGGGTCTCAGTGGCTGTGGCTTTTACTCTGATGAGCT  900
      |||||| ||||||||||||||||| |||||||| ||||||||||||||||
seq2  GGGTGG-AGATGCCGGGTCTCAGT-GCTGTGGC-TTTACTCTGATGAGCT  886

seq1  CTTTCATCTGAAGAAATCTGAGCAGAGGACCCAATTTCCTTTCTGAGAGT  950
      | ||||||||||| ||||||||| |||     |  |||  ||||||||||
seq2  C-TTCATCTGAAG-AATCTGAGC-GAG-----ACATTC--TTCTGAGAGT  926

seq1  CTCACTATGTCTCCTGTGAGATGAC-TATAGAGAGCAGAACAAATGCAGA  999
      ||||||||||||||||||| ||||| ||||||||   |||| | ||| ||
seq2  CTCACTATGTCTCCTGTGA-ATGACTTATAGAGAAGCGAACCATTGC-GA  974

seq1  ACCAACTGCTTTGGTGCAGTTTCCATTATCCAG  1032
      ||  ||||| |||||||||||  ||||||||||
seq2  AC--ACTGC-TTGGTGCAGTT--CATTATCCAG  1002