BAC Information

Click to search

BAC

Clone NameB6Ng01-107F02
Chromosome7 (Build37)
Map Location 33,220,581 - 33,221,099
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107F02.bB6Ng01-107F02.g
ACCDH914817DH914818
length1,0491,051
definitionDH914817|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F02, 5' end.DH914818|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaaggcttttatcatgaatgggtgttggatcttg
tcgaatgctttttccgcatctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattatgttgatggatttctgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattact
ttaatgtgttcttgtattcggttagcaagaattttattgaggatttttgc
atgtatattcataagggaaattggtctgaagttctctatcttgttggatc
tttctgtggtttaggtaccagagtaattgggaattcatagaatgagttgg
gtagagttccttctacttctattttgtggaatagtttgtgaggaactgga
attagatcttctttgaaggtctggtagtactctgcactaaacccatctgg
tcctgggcttttgttggctgggagactattaatgactgcttctatttctt
taggagatatgggactgtttagatcgttaatttgatcctgatttaacttt
ggtacctggtatctgtctagaaacttgtccatttcatccaggttttctag
ttttgttgagtatagccttttgtataaaaatctgatggtgttttggattt
tttcaggatctgttgttatgtctcccttttcatttctgattttgttgatt
aggatgttgtccatgtgccctctagtgagtctagataagggtttatctat
cttgttgatttcacaaagaaccaactcctcctttggttaattctttgaat
agttctttttgtttccacttggttgatttcacccctgattttgattattt
cctgccatctactcctctttgggtgaattttcttcctttttttctagagc
ttttagatgtgttgtcaagctgctaatgtgtgctctttcagtttcttttt
tggaggcactcagagctatgagtttccctgttagaaattgttttcattgt
gtcccatagtttgggtatgttgtggcttcatttcattaaactataaaaa
gaattctttgttgagttctgtacccattttctaactagggttatttgatt
ctctggagtctaacttcttgagttctttgtatgtattagatattagtcct
ctattggatgtaggattggtaaagatcatttcctgatctgttggttgctg
ttttgttctattgacagtgtcctttgcctgacagaagctttgcaatttta
tgaggtcccatttggtgattcttgatcttagaccataaagtattggtgtt
ctgttcaggaaatattcccctgtgcccatgtgttcaagtttctttcccag
tttctctattagtttcagtgtatctggttttatgtggaggtctttgtcca
cttagacttgatctttgtacatggagataagaatggatcaattcacattc
tcctacaagttcaccactagttgaactagcaccatttgttgaaaacgctg
tcttttttccactggatggttgtagctcctttgccaaagatcaagtgacc
ataggtatatgggttcatttctgggtcttcagttctattccattgatcta
cctgcctgtcactgtaccaatactgtgtagcttttatcacaattgctcta
tagtacagattgaggtcagggatggtgctttccccggaagttctttatta
ttgagaatagttttctgtatcctgaatttcttgctatcccaagtgaattt
tcaaattgctctttctaactctttgaagaatttagtttgaaaatttgatg
gggattgcactgaatctgttgattgcttgacaagatggccattttttttt
ctataataatcctgctaatcatgagcatgggagatttttccattttctgt
ggtattcttcaatttcttcttcagaaacttgaagttcttgtcatatagat
ctttcacttgttggtagagtcacaccaagtattttatattgttgtgtcta
tgtgaatggtgtcgtttgctaatttcttctcagcccattatttttgagat
aagagtctactgatttgttgaggttattttatattcagcaccttgctgtt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33220581_33221099
seq2: B6Ng01-107F02.b_44_560 (reverse)

seq1  CATTCCCATATCCCCTAAAGAAATAGAATCAGTCATTAGTAGTCTCCCAG  50
      || ||||||||| ||||||||||||||| ||||||||| |||||||||||
seq2  CAGTCCCATATCTCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAG  50

seq1  CCAAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGAC  100
      || || |||||||||||||||||||||||||||||||||| |||||||||
seq2  CC-AACAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTACTACCAGAC  99

seq1  CTTCAAAGAAGATCTAATTCCAGTTCTGCATAAAGTATTCCACAAAATAG  150
      ||||||||||||||||||||||||||  || ||| |||||||||||||||
seq2  CTTCAAAGAAGATCTAATTCCAGTTCCTCACAAACTATTCCACAAAATAG  149

seq1  AAGTAGATGGAACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTG  200
      ||||||| |||||||||||||||||||||||||||  | |||||||||||
seq2  AAGTAGAAGGAACTCTACCCAACTCATTCTATGAATTCCCAATTACTCTG  199

seq1  ATACCTAAACCACAGAAAGATCCAAAAAAGATAGAGAACTTCAGACCAAT  250
       |||||||||||||||||||||| || |||||||||||||||||||||||
seq2  GTACCTAAACCACAGAAAGATCC-AACAAGATAGAGAACTTCAGACCAAT  248

seq1  TTCCCTTATGAATATAGATGCAAAAATCCTCAATAAAATTCTCGCTAACC  300
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  TTCCCTTATGAATATACATGCAAAAATCCTCAATAAAATTCTTGCTAACC  298

seq1  GAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTT  350
      |||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAATACAAGAACACATTAAAGTAATCATCCATCCTGACCAAGTAGGTTTT  348

seq1  ATTCCAGGGATGCAGGGATGGTTTAATATTCGGAAATCCATCAACGTAAT  400
      ||||||||||||||||||||||||||||| | ||||||||||||| ||||
seq2  ATTCCAGGGATGCAGGGATGGTTTAATATACAGAAATCCATCAACATAAT  398

seq1  CCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCCTTAG  448

seq1  ATGCGGAAAAAGCATTCGACAAGATCCAACACCCATTCATGATAAAAGTC  500
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGCGGAAAAAGCATTCGACAAGATCCAACACCCATTCATGATAAAAGCC  498

seq1  TTGGAAAGATCAGGAATTC  519
      |||||||||||||||||||
seq2  TTGGAAAGATCAGGAATTC  517