BAC Information

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BAC

Clone NameB6Ng01-107I16
Chromosome7 (Build37)
Map Location 126,278,629 - 126,378,787
singlet/doubletdoublet
Overlap geneGpr139
Upstream gene2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
Downstream geneLOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107I16.bB6Ng01-107I16.g
ACCDH914981DH914982
length465491
definitionDH914981|Mus musculus domesticus DNA, BAC clone: B6Ng01-107I16, 5' end.DH914982|Mus musculus domesticus DNA, BAC clone: B6Ng01-107I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,278,629 - 126,279,099)(126,378,291 - 126,378,787)
sequence
tgtaagaaacaacatcctacccttctaagaagttaaataactgaagctgg
gtaagcagcacttgcgtatgcatgagggtggaagttcaagccccaggagc
tatgtagaaaggcaggtatgatggcatgcatttgtgattccagtgctggg
ggtggttggggccagaagtatccccaacgctttctggccagactcttttt
caaaaaacaaagtggaaaaaaaaaaaccaaagttggcagttctaaaaatg
agacggttgacctctgatcttgatgttctcaggtacacacacacacacac
acacacacacacacacacactattgtaacgcaggtcatttttttttatgg
gaccagagaaggcaactcgaattttctcagacacttcataagtctgtaaa
gtttcagaacctcggacagagcacagtggctactcccttccttccttcct
tccttccttccttcc
aactaatctccaacaaaaagacagtatgttaggatccctcttgtcctacc
tgttcttttccttggtgtccattccctccttccaattcatttagcagcta
ttcatagtgtgcttactaggaaaggagacaggatgcagtgggcagtgtcc
agtagttttcagcatggccttcagggaacacgctctggagaatactgcag
gacaagtggagaaggcttcacatgcagcacaggcaaggcagaggaaggca
gacaggcactgatggtgctgagaattgccctgaattttgcatgaatggcc
acaagaaggaggttatgtaaaacacagcttcagcggcaactttctccaac
aatcaaactgcagatggaaagagcaggagctgggggtgggggggaaagtg
gattaaaacagactttagagatatctaaccaatagtgacatatggtcctt
gtttgcattctgattccatcagattgtaaatgagaaaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126278629_126279099
seq2: B6Ng01-107I16.b_47_517

seq1  GAATTCTGTAAGAAACAACATCCTACCCTTCTAAGAAGTTAAATAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAGAAACAACATCCTACCCTTCTAAGAAGTTAAATAACTGA  50

seq1  AGCTGGGTAAGCAGCACTTGCGTATGCATGAGGGTGGAAGTTCAAGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTAAGCAGCACTTGCGTATGCATGAGGGTGGAAGTTCAAGCCCC  100

seq1  AGGAGCTATGTAGAAAGGCAGGTATGATGGCATGCATTTGTGATTCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTATGTAGAAAGGCAGGTATGATGGCATGCATTTGTGATTCCAGT  150

seq1  GCTGGGGGTGGTTGGGGCCAGAAGTATCCCCAACGCTTTCTGGCCAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGGTGGTTGGGGCCAGAAGTATCCCCAACGCTTTCTGGCCAGACT  200

seq1  CTTTTTCAAAAAACAAAGTGGAAAAAAAAAAACCAAAGTTGGCAGTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAAAAAACAAAGTGGAAAAAAAAAAACCAAAGTTGGCAGTTCTA  250

seq1  AAAATGAGACGGTTGACCTCTGATCTTGATGTTCTCAGGTACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGACGGTTGACCTCTGATCTTGATGTTCTCAGGTACACACACAC  300

seq1  ACACACACACACACACACACACACACTATTGTAACGCAGGTCATTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACTATTGTAACGCAGGTCATTTTTTT  350

seq1  TTATGGGACCAGAGAAGGCAACTCGAATTTTCTCAGACACTTCATAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGACCAGAGAAGGCAACTCGAATTTTCTCAGACACTTCATAAGTC  400

seq1  TGTAAAGTTTCAGAACCTCGGACAGAGCACAGTGGCTACTCCCTTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTTTCAGAACCTCGGACAGAGCACAGTGGCTACTCCCTTCCTTC  450

seq1  CTTCCTTCCTTCCTTCCTTCC  471
      |||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCCTTCC  471

seq1: chr7_126378291_126378787
seq2: B6Ng01-107I16.g_66_562 (reverse)

seq1  TCTTTTTCTCTTTTACAATCTGTTGGAATCAGAATGCAAACAAGGACCAT  50
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  TCTTTTTCTCATTTACAATCTGATGGAATCAGAATGCAAACAAGGACCAT  50

seq1  ATGTCACTATTGGTTAGATATCTCTAAAGTCTGTTTTAATCCACTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTATTGGTTAGATATCTCTAAAGTCTGTTTTAATCCACTTTCCC  100

seq1  CCCCACCCCCAGCTCCTGCTCTTTCCATCTGCAGTTTGATTGTTGGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCAGCTCCTGCTCTTTCCATCTGCAGTTTGATTGTTGGAGAA  150

seq1  AGTTGCCGCTGAAGCTGTGTTTTACATAACCTCCTTCTTGTGGCCATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCGCTGAAGCTGTGTTTTACATAACCTCCTTCTTGTGGCCATTCA  200

seq1  TGCAAAATTCAGGGCAATTCTCAGCACCATCAGTGCCTGTCTGCCTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATTCAGGGCAATTCTCAGCACCATCAGTGCCTGTCTGCCTTCCT  250

seq1  CTGCCTTGCCTGTGCTGCATGTGAAGCCTTCTCCACTTGTCCTGCAGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGCCTGTGCTGCATGTGAAGCCTTCTCCACTTGTCCTGCAGTAT  300

seq1  TCTCCAGAGCGTGTTCCCTGAAGGCCATGCTGAAAACTACTGGACACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGAGCGTGTTCCCTGAAGGCCATGCTGAAAACTACTGGACACTGC  350

seq1  CCACTGCATCCTGTCTCCTTTCCTAGTAAGCACACTATGAATAGCTGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCATCCTGTCTCCTTTCCTAGTAAGCACACTATGAATAGCTGCTA  400

seq1  AATGAATTGGAAGGAGGGAATGGACACCAAGGAAAAGAACAGGTAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTGGAAGGAGGGAATGGACACCAAGGAAAAGAACAGGTAGGACA  450

seq1  AGAGGGATCCTAACATACTGTCTTTTTGTTGGAGATTAGTTGAATTC  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGATCCTAACATACTGTCTTTTTGTTGGAGATTAGTTGAATTC  497