BAC Information

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BAC

Clone NameB6Ng01-107L19
Chromosome7 (Build37)
Map Location 125,638,296 - 125,825,821
singlet/doubletdoublet
Overlap geneCoq7, Tmc7, B230311B06Rik, Tmc5
Upstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik
Downstream geneMir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107L19.bB6Ng01-107L19.g
ACCDH915116DH915117
length1,203681
definitionDH915116|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L19, 5' end.DH915117|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,638,296 - 125,639,498)(125,825,141 - 125,825,821)
sequence
gaattcactatgtttaaatgaggttgtaatgatgggcccctaatctgata
gaatctgtgatgagacatggatggctggcttcacactcctcaccaaggga
agactgaccatacataggatacagggagaggtgcccatctctgagctggg
aaagcagccctcctcagaaacctaaccccagcaggcctccatcttttact
tcccagcccccagacccaggtgccgataagtcccattgtttaagttgctc
aattcatggtgtttgcagtcagcccacaatgactaatactctgggtaccc
agcccagggaacaggacaaagggtcactgtggcaagggtgttcccctaga
gcaagtcacagtgccaacagaagggggctaggaagagcagaggcaccaca
tttatgtcttagtcttacttttcactctggtcctcttgtctctggagtag
ccagggtcgtgacactaactaggtgattaattttcccctattagatatgg
tggcacactacctcctaccaccaaacaatgtcaacaccatagatcagagc
tcagcaaacacttttcatgaggacccaccctgaggacaggttcatactgt
gagccaggctcccacagctgctcaggtctgctcagtagccacagggtagc
tctgctcatttcctgggccactagaatgaagcagtacacaggagtggccc
gaagctaccaggaatggtgacacccatttgtaatcctggtatttgggaag
ttcaggcaggaagatcgatcataagcttagggccagcctggactccatag
tgaaatcctgtctcaaaatatcagaaccaccaaactgatatcttctacag
gtctagaggcttccgtagcaaagccacagggccaggctcttcttcccctc
aaagccccagagtgataacactgcagtgtcggccatctctttcctctgag
tttgttggcatctctgtctccaaatctctctctcctttgttttgtaaata
tgtcagttgtaaactgggcattctggcttcacatttgtacttcagcactt
gggagctaaggcaaagggattccttatgagtttgacgccgactgggctac
accagtcaataccagaccagcctaggctggaagagtgagaatcctcttgt
ttgttcaagacacccaagaaaggcatgtccgacgtggtagacgacttgga
tcc
gaattccatcccaagatcccagcaagctggaggaggacagccggccatct
tgggaataaccagccagactctgttagatgcctctgctttcttcggggtc
ctccatccaaggaagactttgattcataagagatccaacccagtagagag
aagtgagatggaatttccagaaggcagcttcgtggcccagcataacttac
gcatgtgttggtgtacccaccaaagtcagcgtggactgtccagggaagct
tgtccaaagacttctcagccaaaccaggtagggatgtggatgcctttagt
catagcacttgggaggcaaggacaggccaacctctataagttccaggtga
gcctggtctacagagtgagttccaggacagccagggctacacagagaaac
cctgtctcaataaaacaaaacaaaacaaacaaaaaagtaaactaaaaacc
taaaataccaaccaaacaaaaagattttaaaaaaaagaaaaaggacttct
cagccttgagctaactatcacctgctggctgctcagaatgacagttgcct
ctgcctggccaggcaaagttactgacctagaaccgacggtttctttgcta
attaatgctcactatctcatgagaatatgctattcttgatttttttaaaa
tgtgtggtgtttgtttggttggttggttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125638296_125639498
seq2: B6Ng01-107L19.b_46_1248

seq1  GAATTCACTATGTTTAAATGAGGTTGTAATGATGGGCCCCTAATCTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTTTAAATGAGGTTGTAATGATGGGCCCCTAATCTGATA  50

seq1  GAATCTGTGATGAGACATGGATGGCTGGCTTCACACTCCTCACCAAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGTGATGAGACATGGATGGCTGGCTTCACACTCCTCACCAAGGGA  100

seq1  AGACTGACCATACATAGGATACAGGGAGAGGTGCCCATCTCTGAGCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGACCATACATAGGATACAGGGAGAGGTGCCCATCTCTGAGCTGGG  150

seq1  AAAGCAGCCCTCCTCAGAAACCTAACCCCAGCAGGCCTCCATCTTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCCCTCCTCAGAAACCTAACCCCAGCAGGCCTCCATCTTTTACT  200

seq1  TCCCAGCCCCCAGACCCAGGTGCCGATAAGTCCCATTGTTTAAGTTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCCCCAGACCCAGGTGCCGATAAGTCCCATTGTTTAAGTTGCTC  250

seq1  AATTCATGGTGTTTGCAGTCAGCCCACAATGACTAATACTCTGGGTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGGTGTTTGCAGTCAGCCCACAATGACTAATACTCTGGGTACCC  300

seq1  AGCCCAGGGAACAGGACAAAGGGTCACTGTGGCAAGGGTGTTCCCCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGGAACAGGACAAAGGGTCACTGTGGCAAGGGTGTTCCCCTAGA  350

seq1  GCAAGTCACAGTGCCAACAGAAGGGGGCTAGGAAGAGCAGAGGCACCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCACAGTGCCAACAGAAGGGGGCTAGGAAGAGCAGAGGCACCACA  400

seq1  TTTATGTCTTAGTCTTACTTTTCACTCTGGTCCTCTTGTCTCTGGAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCTTAGTCTTACTTTTCACTCTGGTCCTCTTGTCTCTGGAGTAG  450

seq1  CCAGGGTCGTGACACTAACTAGGTGATTAATTTTCCCCTATTAGATATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCGTGACACTAACTAGGTGATTAATTTTCCCCTATTAGATATGG  500

seq1  TGGCACACTACCTCCTACCACCAAACAATGTCAACACCATAGATCAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACTACCTCCTACCACCAAACAATGTCAACACCATAGATCAGAGC  550

seq1  TCAGCAAACACTTTTCATGAGGACCCACCCTGAGGACAGGTTCATACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAACACTTTTCATGAGGACCCACCCTGAGGACAGGTTCATACTGT  600

seq1  GAGCCAGGCTCCCACAGCTGCTCAGGTCTGCTCAGTAGCCACAGGGTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGGCTCCCACAGCTGCTCAGGTCTGCTCAGTAGCCACAGGGTAGC  650

seq1  TCTGCTCATTTCCTGGGCCACTAGAATGAAGCAGTACACAGGAGTGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCATTTCCTGGGCCACTAGAATGAAGCAGTACACAGGAGTGGCCC  700

seq1  GAAGCTACCAGGAATGGTGACACCCATTTGTAATCCTGGTATTTGGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTACCAGGAATGGTGACACCCATTTGTAATCCTGGTATTTGGGAAG  750

seq1  TTCAGGCAGGAAGATCGATCATAAGCTTAGGGCCAGCCTGGACTCCATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAGGAAGATCGATCATAAGCTTAGGGCCAGCCTGGACTCCATAG  800

seq1  TGAAATCCTGTCTCAAAATATCAGAACCACCAAACTGATATCTTCTACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCCTGTCTCAAAATATCAGAACCACCAAACTGATATCTTCTACAG  850

seq1  GTCTAGAGGCTTCCGTAGCAAAGCCACAGGGCCAGGCTCTTCTTCCCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAGGCTTCCGTAGCAAAGCCACAGGGCCAGGCTCTTCTTCCCCTC  900

seq1  AAAGCCCCAGAGTGATAACACTGCAGTGTCGGCCATCTCTTTCCTCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCCAGAGTGATAACACTGCAGTGTCGGCCATCTCTTTCCTCTGAG  950

seq1  TTTGTTGGCATCTCTGTCTCCAAATCTCTCTCTCCTTTGTTTTGTAAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGCATCTCTGTCTCCAAATCTCTCTCTCCTTTGTTTTGTAAATA  1000

seq1  TGTCAGTTGTAAACTGGGCATTCTGGC-TCACATCTGTAACTTCAGCACT  1049
      ||||||||||||||||||||||||||| |||||| ||| |||||||||||
seq2  TGTCAGTTGTAAACTGGGCATTCTGGCTTCACATTTGT-ACTTCAGCACT  1049

seq1  TGGGAAGCTAAGGCAAAGGGAT--CCTATGAGTTTGACGCCAGACTGGGC  1097
      |||| |||||||||||||||||  | ||||||||||||||| ||||||||
seq2  TGGG-AGCTAAGGCAAAGGGATTCCTTATGAGTTTGACGCC-GACTGGGC  1097

seq1  TACA-CAGTCAATACCAGACCAGCCTAGGCT-GAAGAGTGAGA--TCTCT  1143
      |||| |||||||||||||||||||||||||| |||||||||||   ||||
seq2  TACACCAGTCAATACCAGACCAGCCTAGGCTGGAAGAGTGAGAATCCTCT  1147

seq1  TGTTTGTCTCAAGACAACAAGAAAAGCCATGCCAGACGTGGTAGCACAGA  1193
      ||||||| |||||||| | |  |||| |||| | |||||||||| || ||
seq2  TGTTTGT-TCAAGACACCCAAGAAAGGCATGTCCGACGTGGTAG-AC-GA  1194

seq1  CTTGTGATCC  1203
      |||| |||||
seq2  CTTG-GATCC  1203

seq1: chr7_125825141_125825821
seq2: B6Ng01-107L19.g_69_749 (reverse)

seq1  ACCAACCAACCAACCAAACAAACACCACACATTTTAAAAAAATCAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCAACCAAACAAACACCACACATTTTAAAAAAATCAAGAAT  50

seq1  AGCATATTCTCATGAGATAGTGAGCATTAATTAGCAAAGAAACCGTCGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTCTCATGAGATAGTGAGCATTAATTAGCAAAGAAACCGTCGGT  100

seq1  TCTAGGTCAGTAACTTTGCCTGGCCAGGCAGAGGCAACTGTCATTCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTCAGTAACTTTGCCTGGCCAGGCAGAGGCAACTGTCATTCTGAG  150

seq1  CAGCCAGCAGGTGATAGTTAGCTCAAGGCTGAGAAGTCCTTTTTCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGCAGGTGATAGTTAGCTCAAGGCTGAGAAGTCCTTTTTCTTTTT  200

seq1  TTTAAAATCTTTTTGTTTGGTTGGTATTTTAGGTTTTTAGTTTACTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATCTTTTTGTTTGGTTGGTATTTTAGGTTTTTAGTTTACTTTTT  250

seq1  TGTTTGTTTTGTTTTGTTTTATTGAGACAGGGTTTCTCTGTGTAGCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTGTTTTGTTTTATTGAGACAGGGTTTCTCTGTGTAGCCCTG  300

seq1  GCTGTCCTGGAACTCACTCTGTAGACCAGGCTCACCTGGAACTTATAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAACTCACTCTGTAGACCAGGCTCACCTGGAACTTATAGAG  350

seq1  GTTGGCCTGTCCTTGCCTCCCAAGTGCTATGACTAAAGGCATCCACATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCTGTCCTTGCCTCCCAAGTGCTATGACTAAAGGCATCCACATCC  400

seq1  CTACCTGGTTTGGCTGAGAAGTCTTTGGACAAGCTTCCCTGGACAGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGGTTTGGCTGAGAAGTCTTTGGACAAGCTTCCCTGGACAGTCCA  450

seq1  CGCTGACTTTGGTGGGTACACCAACACATGCGTAAGTTATGCTGGGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACTTTGGTGGGTACACCAACACATGCGTAAGTTATGCTGGGCCAC  500

seq1  GAAGCTGCCTTCTGGAAATTCCATCTCACTTCTCTCTACTGGGTTGGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGCCTTCTGGAAATTCCATCTCACTTCTCTCTACTGGGTTGGATC  550

seq1  TCTTATGAATCAAAGTCTTCCTTGGATGGAGGACCCCGAAGAAAGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAATCAAAGTCTTCCTTGGATGGAGGACCCCGAAGAAAGCAGAG  600

seq1  GCATCTAACAGAGTCTGGCTGGTTATTCCCAAGATGGCCGGCTGTCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAACAGAGTCTGGCTGGTTATTCCCAAGATGGCCGGCTGTCCTCC  650

seq1  TCCAGCTTGCTGGGATCTTGGGATGGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  TCCAGCTTGCTGGGATCTTGGGATGGAATTC  681