BAC Information

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BAC

Clone NameB6Ng01-108F03
Chromosome7 (Build37)
Map Location 105,986,031 - 106,178,976
singlet/doubletdoublet
Overlap geneWnt11, LOC666978, Uvrag, EG666529
Upstream genePak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir
Downstream geneDgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108F03.bB6Ng01-108F03.g
ACCDH915535DH915536
length1,205899
definitionDH915535|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F03, 5' end.DH915536|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,177,771 - 106,178,976)(105,986,031 - 105,986,933)
sequence
gaattcattttctgggacccatatcctgctgctcataatcatttgtaact
ccagctctggggatccagtgccttcttctaaccatcatgggcacccacac
actgcatgctatatatcttgtacgcgcacacacacacacacacacacaca
cacacacacacacacacacagagatattacacttagagaaggtaaagaaa
ggtccagagggggaaaagaagggcaaactcaaccttttatgatggaccta
tggatgaatcttggatgaagtcctaagggtagaacccagtcctaaactct
gcctaaggatccactcccaaggctattacaattcagtttcatcttgcctt
tcaaaaggacattctagtacctataaaccatcaggacctctgtcccctcc
ccactctggttgtcctttgtcagtctttgctgactattatatctgcgggt
ttccagccctcgttgagataatttggtaacatattttgctagagaatcat
aacttaaaacaacttactggcatcaagttgtccgtattccttcagtttaa
agatcacgtccatatctgcagtttgtttcttttctcatctttagttccaa
agttcttttctgtgtacttcctcaagtgtgtttattgtgcaatgaataca
ttttaaattaaacttgctaaaatgcacatggatggtattaggaacaaatc
tgggaatgatttagcctgttcttaggccaagtgtggcggttgttgcctaa
aatgagttatttgagttgtaaattggaaatgcgaagacttgattattgtt
ctgtgaccattgccccatcatccttgctgctggttctgagaggacatctt
agttagacctgacattctcattagcacatgctctcaccctccacacctcg
cccccatcttctcagtagaactttcccacccacagcgctaccagttactt
ttcaatgaaagtatataattttatatgtagcgcaagtattgtgttttatt
tgctgccattaccatgagactgtgtgttctcaactatggtggagtggttc
tagacagagatgtcgaggctttggggtagaattcctggtttggagaatat
atacttaataaacctcttcagtattggagggagtcccatggtttcgaagt
tcctgtaggtgccgtccgaattccatgattggcacatggaacgcacatgg
gtggt
gaattcctctggattctgccagaaggccccagaaaactatgacgtttcaa
acgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcaagcctgtac
atttgaaacacacaggcgtgcataggctacacaggtatgtataataatag
cggatacagagagaagatcagacgaagatcagaaagctggagtccaggtc
tttgctttttaataaaagggaaaacttaggctggggtggttgaggaattg
cccaaactcacagagccagatgagaaccgctcttccctgttccagagacc
ccccccccccaagtctggcacctccttcctcagactctgtagaccctttt
ggaaggaatccctttgtccttgctgctccagagaggagaggggctgtgta
tgactcggggcgaatgccaggtgttggtaaatttgggagaagcctggaag
ggagttaatgaggtgagaatgatgagaagggagtcaagcctcagaaagca
gctccgcaggctgcaagcgggcggggtggcggctcctccgcggccctagc
tcgccgcctggcggtcccagaatcaacctcttgcaggcctggagcttccc
tgctctgctagggagctttggcgctgcctcgtccggaccgaggcactgaa
gtggcaagtctgaagtagctcttcaggcgctggagatgcctcagtgtgta
aagagcacccacctccaccccatttttgcagttccccttcccttactgga
aagtaggtgcccagaaatagcaccgcttctgtgttctccctgcccttagc
ttacccggcacaggtagacaaaatagttcaacagccctgcacagacgggt
gctcactaactgaacagcctaacaactaacagaaaagatgtttccactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106177771_106178976
seq2: B6Ng01-108F03.b_43_1247 (reverse)

seq1  ACCAC---TGTGCGCTCCATGTGCCCCAAATCATTTGCATCTCGACAGCA  47
      |||||   |||||| ||||||||||   ||||| | | ||   ||| |||
seq2  ACCACCCATGTGCGTTCCATGTGCC---AATCA-TGGAATTCGGACGGCA  46

seq1  CCTACAGCACTCTCGGACACATGGGACTCCCTCCAATACTTGAAGA-GTT  96
      ||||||| |   ||| |  |||||||||||||||||||| |||||| |||
seq2  CCTACAGGAACTTCGAAACCATGGGACTCCCTCCAATAC-TGAAGAGGTT  95

seq1  TATTAAGTAT-TATTCTCCCAAACCAGGAA-TCTACCCCAAAGCCTCCGA  144
      |||||||||| |||||| |||||||||||| ||||||||||||||| |||
seq2  TATTAAGTATATATTCT-CCAAACCAGGAATTCTACCCCAAAGCCT-CGA  143

seq1  CATTCCTCTGTCTAG-ACCACTC--ACATAGTTGAGAACACACAGTCTCA  191
      |||  |||||||||| |||||||   ||||||||||||||||||||||||
seq2  CAT--CTCTGTCTAGAACCACTCCACCATAGTTGAGAACACACAGTCTCA  191

seq1  TGGTAATGGCAGCAAATAAAACACAATACTTGCGCTACATATAAAATTAA  241
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGTAATGGCAGCAAATAAAACACAATACTTGCGCTACATATAAAATT-A  240

seq1  TATACTTTCATTGAAAAGTAACTGGTAGCGCTGTGGGTGGGAAAGTTCTA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTCATTGAAAAGTAACTGGTAGCGCTGTGGGTGGGAAAGTTCTA  290

seq1  CTGAGAAGATGGGGGCGAGGTGTGGAGGGTGAGAGCATGTGCTAATGAGA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGATGGGGGCGAGGTGTGGAGGGTGAGAGCATGTGCTAATGAGA  340

seq1  ATGTCAGGTCTAACTAAGATGTCCTCTCAGAACCAGCAGCAAGGATGATG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGGTCTAACTAAGATGTCCTCTCAGAACCAGCAGCAAGGATGATG  390

seq1  GGGCAATGGTCACAGAACAATAATCAAGTCTTCGCATTTCCAATTTACAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGGTCACAGAACAATAATCAAGTCTTCGCATTTCCAATTTACAA  440

seq1  CTCAAATAACTCATTTTAGGCAACAACCGCCACACTTGGCCTAAGAACAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATAACTCATTTTAGGCAACAACCGCCACACTTGGCCTAAGAACAG  490

seq1  GCTAAATCATTCCCAGATTTGTTCCTAATACCATCCATGTGCATTTTAGC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATCATTCCCAGATTTGTTCCTAATACCATCCATGTGCATTTTAGC  540

seq1  AAGTTTAATTTAAAATGTATTCATTGCACAATAAACACACTTGAGGAAGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAATTTAAAATGTATTCATTGCACAATAAACACACTTGAGGAAGT  590

seq1  ACACAGAAAAGAACTTTGGAACTAAAGATGAGAAAAGAAACAAACTGCAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAAAGAACTTTGGAACTAAAGATGAGAAAAGAAACAAACTGCAG  640

seq1  ATATGGACGTGATCTTTAAACTGAAGGAATACGGACAACTTGATGCCAGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACGTGATCTTTAAACTGAAGGAATACGGACAACTTGATGCCAGT  690

seq1  AAGTTGTTTTAAGTTATGATTCTCTAGCAAAATATGTTACCAAATTATCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTTTAAGTTATGATTCTCTAGCAAAATATGTTACCAAATTATCT  740

seq1  CAACGAGGGCTGGAAACCCGCAGATATAATAGTCAGCAAAGACTGACAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGAGGGCTGGAAACCCGCAGATATAATAGTCAGCAAAGACTGACAAA  790

seq1  GGACAACCAGAGTGGGGAGGGGACAGAGGTCCTGATGGTTTATAGGTACT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACCAGAGTGGGGAGGGGACAGAGGTCCTGATGGTTTATAGGTACT  840

seq1  AGAATGTCCTTTTGAAAGGCAAGATGAAACTGAATTGTAATAGCCTTGGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCCTTTTGAAAGGCAAGATGAAACTGAATTGTAATAGCCTTGGG  890

seq1  AGTGGATCCTTAGGCAGAGTTTAGGACTGGGTTCTACCCTTAGGACTTCA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCCTTAGGCAGAGTTTAGGACTGGGTTCTACCCTTAGGACTTCA  940

seq1  TCCAAGATTCATCCATAGGTCCATCATAAAAGGTTGAGTTTGCCCTTCTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATTCATCCATAGGTCCATCATAAAAGGTTGAGTTTGCCCTTCTT  990

seq1  TTCCCCCTCTGGACCTTTCTTTACCTTCTCTAAGTGTAATATCTCTGTGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCTGGACCTTTCTTTACCTTCTCTAAGTGTAATATCTCTGTGT  1040

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTACAAGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTACAAGA  1090

seq1  TATATAGCATGCAGTGTGTGGGTGCCCATGATGGTTAGAAGAAGGCACTG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGCATGCAGTGTGTGGGTGCCCATGATGGTTAGAAGAAGGCACTG  1140

seq1  GATCCCCAGAGCTGGAGTTACAAATGATTATGAGCAGCAGGATATGGGTC  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAGAGCTGGAGTTACAAATGATTATGAGCAGCAGGATATGGGTC  1190

seq1  CCAGAAAATGAATTC  1206
      |||||||||||||||
seq2  CCAGAAAATGAATTC  1205

seq1: chr7_105986031_105986933
seq2: B6Ng01-108F03.g_67_965

seq1  GAATTCCTCTGGATTCTGCCAGAAGGCCCCAGAAAACTATGACGTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGATTCTGCCAGAAGGCCCCAGAAAACTATGACGTTTCAA  50

seq1  ACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAAGCCTGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAAGCCTGTAC  100

seq1  ATTTGAAACACACAGGCGTGCATAGGCTACACAGGTATGTATAATAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAACACACAGGCGTGCATAGGCTACACAGGTATGTATAATAATAG  150

seq1  CGGATACAGAGAGAAGATCAGACGAAGATCAGAAAGCTGGAGTCCAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATACAGAGAGAAGATCAGACGAAGATCAGAAAGCTGGAGTCCAGGTC  200

seq1  TTTGCTTTTTAATAAAAGGGAAAACTTAGGCTGGGGTGGTTGAGGAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTTAATAAAAGGGAAAACTTAGGCTGGGGTGGTTGAGGAATTG  250

seq1  CCCAAACTCACAGAGCCAGATGAGAACCGCTCTTCCCTGTTCCAGAGACC  300
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCCAAACTCACAGAGCCAGATGAGAACCGCTCTTCCCTGTTCCAGAGA-C  299

seq1  CCCCCCCCCCCAAGTCTGGCACCTCCTTCCTCAGACTCTGTAGACCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCAAGTCTGGCACCTCCTTCCTCAGACTCTGTAGACCCTTT  349

seq1  TGGAAGGAATCCCTTTGTCCTTGCTGCTCCAGAGAGGAGAGGGGCTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAATCCCTTTGTCCTTGCTGCTCCAGAGAGGAGAGGGGCTGTGT  399

seq1  ATGACTCGGGGCGAATGCCAGGTGTTGGTAAATTTGGGAGAAGCCTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCGGGGCGAATGCCAGGTGTTGGTAAATTTGGGAGAAGCCTGGAA  449

seq1  GGGAGTTAATGAGGTGAGAATGATGAGAAGGGAGTCAAGCCTCAGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAATGAGGTGAGAATGATGAGAAGGGAGTCAAGCCTCAGAAAGC  499

seq1  AGCTCCGCAGGCTGCAAGCGGGCGGGGTGGCGGCTCCTCCGCGGCCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCGCAGGCTGCAAGCGGGCGGGGTGGCGGCTCCTCCGCGGCCCTAG  549

seq1  CTCGCCGCCTGGCGGTCCCAGAATCAACCTCTTGCAGGCCTGGAGCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCGCCTGGCGGTCCCAGAATCAACCTCTTGCAGGCCTGGAGCTTCC  599

seq1  CTGCTCTGCTAGGGAGCTTTGGCGCTGCCTCGTCCGGACCGAGGCACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGCTAGGGAGCTTTGGCGCTGCCTCGTCCGGACCGAGGCACTGA  649

seq1  AGTGGCAAGTCTGAAGTAGCTCTTCAGGCGCTGGAGATGCCTCAGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAAGTCTGAAGTAGCTCTTCAGGCGCTGGAGATGCCTCAGTGTGT  699

seq1  AAAGAGCACCCACCTCCACCCCATTTTTGCAGTTTCCCCTTCCCTTACTG  750
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGAGCACCCACCTCCACCCCATTTTTGCAG-TTCCCCTTCCCTTACTG  748

seq1  GAAAGTAGGTGCCCAGAAATAGCACCGTCTTCTGTGTTCTCCCTGCCCTT  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAAGTAGGTGCCCAGAAATAGCACCG-CTTCTGTGTTCTCCCTGCCCTT  797

seq1  AGCTTACCCGGCACAGGTAGACAAAATAGCTCAACAGCCCAGCACCAGAC  850
      ||||||||||||||||||||||||||||| |||||||||| ||| |||||
seq2  AGCTTACCCGGCACAGGTAGACAAAATAGTTCAACAGCCCTGCA-CAGAC  846

seq1  GGGTGCTCACTAACTGAACAGCCTAACAACTAACTGAACAGATGTTTCCA  900
      |||||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  GGGTGCTCACTAACTGAACAGCCTAACAACTAACAGAAAAGATGTTTCCA  896

seq1  CAT  903
      | |
seq2  CTT  899