BAC Information

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BAC

Clone NameB6Ng01-108F21
Chromosome7 (Build37)
Map Location 8,573,762 - 8,849,645
singlet/doubletdoublet
Overlap geneLOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009
Upstream geneEG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967
Downstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108F21.bB6Ng01-108F21.g
ACCDH915571DH915572
length7111,201
definitionDH915571|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F21, 5' end.DH915572|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,573,762 - 8,574,472)(8,848,421 - 8,849,645)
sequence
gaattctttggacaaagtgatgttatatgtcaatgggaattctacacaaa
caccctgaaatagactctccttttcaaagccagccaaaacacaaaaatct
ggtagtcaaacactgttggtatcttcttttttcactaattaaccatagca
taattaccaaatacaagggacaatagaaaaatttttgtgactcacaaatg
ccctgttcccctacctggaaatgaaccttatataaactgaatgtactcag
gacttgggagcaaaagtgtgaaaatacaatcacattgatatttgagccca
aatgagaccaactcattgcttccacttgactattctatctattgtacaca
ggatttcttgaggtttgtgggatgagaccaattctcagcgttgcttgcaa
actaatcagagttaatacaccttcacaactgctgataatcctggcttgtt
cattcttttttctactttggatttttgtcaactctttatcattcactctg
aaaattgttagttttggagctgtgctacttataaaatatttaggaagcac
tacatggcaataaatgagtgttagatactcctcatatgtatctatgtgtc
acactgcatgaaaatataagtatcatatatcgcagtatactttaatattt
tatatgaagaaacagtaagtaaatagcaagtttatataatgagtgtgtgt
gtgtgtgtgtg
gaattcactagcttaaactccttgatatagaaacaacactaaattaaaca
gatctgctgtgtgtatgtgtaaatattgatatgtgggtgcacatgccaaa
ataccacttgcattattgaatttaagtgattcctgtaataagtcatatga
agaagtttgaatatgagagcaaatataatgcttacgtttgaataatagga
aatgttaatgaaataagccttaagaagtttcctcatctggcaataattaa
tcaaaagttctggttattgttcatgagatgcactaattttagcactgaag
gaaaaaattatctctgtagatactttgtgctaaaagatccttcatggtcc
tcttaatagtgtatacttagcattttttcatatatttgcaattttttgtc
ttcaatattaatgttacagagaacataggttttgcacatagcagtctcat
gagataatccagcagattagagattatattcagttcttcatgggctccta
ttgtgactaaaacctaatgtaaatgtagttttacaatagattattctttt
ggaaattcttgggccgaattcttgcaaattgcagttacattttctaaagt
atttctttgtgaaatataatcttccatgaatttgcaataagtcaatatga
gggttaagtcacaggatatgtttgtttttgcaaggttttttttttaagga
tttttatatctacaactagtaaatttgataagtaatatattttatatttg
tagtttccttttagttgacttcatcatcccagtgttttacaagagaaata
cacatttgtagtatatatcagagcagcaaacactcacttgtctcattaga
aatttcattttcagggcagggctgcaacagaacagcaggctgccattccc
tccttccacattcttctgaatccaggactacattctgcactgcacacaga
ggatggcatctgagaaaaattagacatatactgatacgagtttatatatt
tctttatgttctatagcactttaaggattcaatagcctcttttttgcacc
actatctgatgacgtttccctatgtcaattatgtgtaatgtccgatatga
aatggaatgcattggagaaagtgtgttaggttctgaagtgtctataatcg
ggaaccggtaatttgagcgtgtgtgtaacacgaagttgaaaccgttgctt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8573762_8574472
seq2: B6Ng01-108F21.b_45_755

seq1  GAATTCTTTGGACAAAGTGATGTTATATGTCAATGGGAATTCTACACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGACAAAGTGATGTTATATGTCAATGGGAATTCTACACAAA  50

seq1  CACCCTGAAATAGACTCTCCTTTTCAAAGCCAGCCAAAACACAAAAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGAAATAGACTCTCCTTTTCAAAGCCAGCCAAAACACAAAAATCT  100

seq1  GGTAGTCAAACACTGTTGGTATCTTCTTTTTTCACTAATTAACCATAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCAAACACTGTTGGTATCTTCTTTTTTCACTAATTAACCATAGCA  150

seq1  TAATTACCAAATACAAGGGACAATAGAAAAATTTTTGTGACTCACAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACCAAATACAAGGGACAATAGAAAAATTTTTGTGACTCACAAATG  200

seq1  CCCTGTTCCCCTACCTGGAAATGAACCTTATATAAACTGAATGTACTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCCCCTACCTGGAAATGAACCTTATATAAACTGAATGTACTCAG  250

seq1  GACTTGGGAGCAAAAGTGTGAAAATACAATCACATTGATATTTGAGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGGAGCAAAAGTGTGAAAATACAATCACATTGATATTTGAGCCCA  300

seq1  AATGAGACCAACTCATTGCTTCCACTTGACTATTCTATCTATTGTACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACCAACTCATTGCTTCCACTTGACTATTCTATCTATTGTACACA  350

seq1  GGATTTCTTGAGGTTTGTGGGATGAGACCAATTCTCAGCGTTGCTTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTTGAGGTTTGTGGGATGAGACCAATTCTCAGCGTTGCTTGCAA  400

seq1  ACTAATCAGAGTTAATACACCTTCACAACTGCTGATAATCCTGGCTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCAGAGTTAATACACCTTCACAACTGCTGATAATCCTGGCTTGTT  450

seq1  CATTCTTTTTTCTACTTTGGATTTTTGTCAACTCTTTATCATTCACTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTTTTCTACTTTGGATTTTTGTCAACTCTTTATCATTCACTCTG  500

seq1  AAAATTGTTAGTTTTGGAGCTGTGCTACTTATAAAATATTTAGGAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTAGTTTTGGAGCTGTGCTACTTATAAAATATTTAGGAAGCAC  550

seq1  TACATGGCAATAAATGAGTGTTAGATACTCCTCATATGTATCTATGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGCAATAAATGAGTGTTAGATACTCCTCATATGTATCTATGTGTC  600

seq1  ACACTGCATGAAAATATAAGTATCATATATCGCAGTATACTTTAATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCATGAAAATATAAGTATCATATATCGCAGTATACTTTAATATTT  650

seq1  TATATGAAGAAACAGTAAGTAAATAGCAAGTTTATATAATGAGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAGAAACAGTAAGTAAATAGCAAGTTTATATAATGAGTGTGTGT  700

seq1  GTGTGTGTGTG  711
      |||||||||||
seq2  GTGTGTGTGTG  711

seq1: chr7_8848421_8849645
seq2: B6Ng01-108F21.g_65_1265 (reverse)

seq1  AAAGCAACAGGTTGCAACTTCTGTAGTTTTTACACACA-GTTCAAAAATC  49
      |||||||| |||| |||||||      | ||||||||| | ||  |||| 
seq2  AAAGCAAC-GGTTTCAACTTC-----GTGTTACACACACGCTC--AAATT  42

seq1  AGCTGTTTTTCCTGAATTACTAGACAC-TCAGAAACTATACAACATTTCT  98
      | | |   |||| | |||| ||||||| |||||| ||| |||   |||||
seq2  ACCGG---TTCCCG-ATTA-TAGACACTTCAGAACCTA-ACACACTTTCT  86

seq1  TCAATGCATTTCCAATATTCATATCTGGACATT--ACATAATGGACATAG  146
       ||||||| |||||   |||||||| |||||||  ||||||| |||||||
seq2  CCAATGCA-TTCCA--TTTCATATC-GGACATTACACATAATTGACATAG  132

seq1  GGAAATGTCAATCAGATAGT-GTGCAAAAAAGAGCTTATTGAAATCTTAA  195
      ||||| ||| |||||||||| |||||||||||||  |||||||  |||||
seq2  GGAAACGTC-ATCAGATAGTGGTGCAAAAAAGAGGCTATTGAATCCTTAA  181

seq1  AGTGCTAATAAAAAACATAAAAGAAATATATAAAACTCGTTATCAGTATA  245
      |||||   || | ||||| |||||||||||| ||||||| ||||||||||
seq2  AGTGC---TATAGAACAT-AAAGAAATATAT-AAACTCG-TATCAGTATA  225

seq1  TGTCTAATTTTTTTCTCAGATGCCATCCTCTGTGTGCAGTGCAGAATGTA  295
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAA--TTTTTCTCAGATGCCATCCTCTGTGTGCAGTGCAGAATGTA  273

seq1  GTTCTGGATTCAGAAGAATGTGGAAGGAGGGAATGGCAGCCTGCTGTTCT  345
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGATTCAGAAGAATGTGGAAGGAGGGAATGGCAGCCTGCTGTTCT  323

seq1  GTTTGCAGCCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAGTGAGTG  395
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  G-TTGCAG-CCCTGCCCTGAAAATGAAATTTCTAATGAGACAAGTGAGTG  371

seq1  TTTGCTGCTCTGATATATACTACAAATGTGTATTTCTATTGTAAAACACT  445
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTGCTGCTCTGATATATACTACAAATGTGTATTTCTCTTGTAAAACACT  421

seq1  GGGATGATGAAGTCAACTAAAAGGAAACTGCAAATATAAAATATATTACT  495
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGGATGATGAAGTCAACTAAAAGGAAACTACAAATATAAAATATATTACT  471

seq1  TATCAAATTTACTAGTTGTAGATATAAAAATCCTTAAAAAAAAAACCTTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATTTACTAGTTGTAGATATAAAAATCCTTAAAAAAAAAACCTTG  521

seq1  CAAAAACAAACATATCCTGTGACTTAACCCTCATATTGACTTATTGCAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAACATATCCTGTGACTTAACCCTCATATTGACTTATTGCAAA  571

seq1  TTCATGGAAGATTATATTTCACAAAGAAATACTTTAGAAAATGTAACTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAGATTATATTTCACAAAGAAATACTTTAGAAAATGTAACTGC  621

seq1  AATTTGCAAGAATTCGGCCCAAGAATTTCCAAAAGAATAATCTATTGTAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAAGAATTCGGCCCAAGAATTTCCAAAAGAATAATCTATTGTAA  671

seq1  AACTACATTTACATTAGGTTTTAGTCACAATAGGAGCCCATGAAGAACTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACATTTACATTAGGTTTTAGTCACAATAGGAGCCCATGAAGAACTG  721

seq1  AATATAATCTCTAATCTGCTGGATTATCTCATGAGACTGCTATGTGCAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATCTCTAATCTGCTGGATTATCTCATGAGACTGCTATGTGCAAA  771

seq1  ACCTATGTTCTCTGTAACATTAATATTGAAGACAAAAAATTGCAAATATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGTTCTCTGTAACATTAATATTGAAGACAAAAAATTGCAAATATA  821

seq1  TGAAAAAATGCTAAGTATACACTATTAAGAGGACCATGAAGGATCTTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAATGCTAAGTATACACTATTAAGAGGACCATGAAGGATCTTTTA  871

seq1  GCACAAAGTATCTACAGAGATAATTTTTTCCTTCAGTGCTAAAATTAGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAGTATCTACAGAGATAATTTTTTCCTTCAGTGCTAAAATTAGTG  921

seq1  CATCTCATGAACAATAACCAGAACTTTTGATTAATTATTGCCAGATGAGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATGAACAATAACCAGAACTTTTGATTAATTATTGCCAGATGAGG  971

seq1  AAACTTCTTAAGGCTTATTTCATTAACATTTCCTATTATTCAAACGTAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTAAGGCTTATTTCATTAACATTTCCTATTATTCAAACGTAAG  1021

seq1  CATTATATTTGCTCTCATATTCAAACTTCTTCATATGACTTATTACAGGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATTTGCTCTCATATTCAAACTTCTTCATATGACTTATTACAGGA  1071

seq1  ATCACTTAAATTCAATAATGCAAGTGGTACTTTGGCATGTGCACCCACAT  1145
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCACTTAAATTCAATAATGCAAGTGGTATTTTGGCATGTGCACCCACAT  1121

seq1  ATCAATATTTACACATACACACAGCAGATCTGTTTAATTTAGTGTTGTTT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATTTACACATACACACAGCAGATCTGTTTAATTTAGTGTTGTTT  1171

seq1  CTATATCAAGGAGTTTAAGCTAGTGAATTC  1225
      ||||||||||||||||||||||||||||||
seq2  CTATATCAAGGAGTTTAAGCTAGTGAATTC  1201